RNA–Protein interactions for RNA: ENST00000466171.1

CCDC93-205, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-205ENST00000466171 ZNF25P17030 456 aaPredicted RBP0.54□□□□□ -2.32
CCDC93-205ENST00000466171 NFYBP25208 207 aa0.54□□□□□ -2.32
CCDC93-205ENST00000466171 HOXA6P31267 233 aa0.54□□□□□ -2.32
CCDC93-205ENST00000466171 DYNLT3P51808 116 aa0.54□□□□□ -2.32
CCDC93-205ENST00000466171 ARF6P62330 175 aa0.54□□□□□ -2.32
CCDC93-205ENST00000466171 CTAG1AP78358 180 aa0.54□□□□□ -2.32
CCDC93-205ENST00000466171 RPL19P84098 196 aaKnown RBP0.54□□□□□ -2.32
CCDC93-205ENST00000466171 FAM74A1Q5RGS3 127 aa0.54□□□□□ -2.32
CCDC93-205ENST00000466171 GDF5OSQ5U4N7 250 aa0.54□□□□□ -2.32
CCDC93-205ENST00000466171 IFT20Q8IY31 132 aa0.54□□□□□ -2.32
CCDC93-205ENST00000466171 ST6GALNAC3Q8NDV1 305 aa0.54□□□□□ -2.32
CCDC93-205ENST00000466171 OR5D14Q8NGL3 314 aa0.54□□□□□ -2.32
CCDC93-205ENST00000466171 OR10K1Q8NGX5 313 aa0.54□□□□□ -2.32
CCDC93-205ENST00000466171 BORCS5Q969J3 196 aa0.54□□□□□ -2.32
CCDC93-205ENST00000466171 GPER1Q99527 375 aa0.54□□□□□ -2.32
CCDC93-205ENST00000466171 PAIP2Q9BPZ3 127 aaKnown RBP0.54□□□□□ -2.32
CCDC93-205ENST00000466171 PBDC1Q9BVG4 233 aa0.54□□□□□ -2.32
CCDC93-205ENST00000466171 NPCDR1Q9BY65 106 aa0.54□□□□□ -2.32
CCDC93-205ENST00000466171 PYCARDQ9ULZ3 195 aa0.54□□□□□ -2.32
CCDC93-205ENST00000466171 ARHGEF28Q8N1W1 1705 aaKnown RBP0.54□□□□□ -2.32
CCDC93-205ENST00000466171 INTS1Q8N201 2190 aaKnown RBP0.54□□□□□ -2.32
CCDC93-205ENST00000466171 HELZ2Q9BYK8 2649 aaKnown RBP0.54□□□□□ -2.32
CCDC93-205ENST00000466171 ARHGEF11O15085 1522 aa0.54□□□□□ -2.32
CCDC93-205ENST00000466171 ARFGEF3Q5TH69 2177 aa0.53□□□□□ -2.32
CCDC93-205ENST00000466171 TNRC6BQ9UPQ9 1833 aaKnown RBP0.53□□□□□ -2.32
CCDC93-205ENST00000466171 SBF1O95248 1867 aa0.53□□□□□ -2.32
CCDC93-205ENST00000466171 TLCD2A6NGC4 264 aa0.53□□□□□ -2.32
CCDC93-205ENST00000466171 A8MWV9 139 aa0.53□□□□□ -2.32
CCDC93-205ENST00000466171 M0R378 163 aa0.53□□□□□ -2.32
CCDC93-205ENST00000466171 DHFRP00374 187 aa0.53□□□□□ -2.32
CCDC93-205ENST00000466171 C1QBP02746 253 aa0.53□□□□□ -2.32
CCDC93-205ENST00000466171 PHBP35232 272 aa0.53□□□□□ -2.32
CCDC93-205ENST00000466171 MPV17LQ2QL34 196 aa0.53□□□□□ -2.32
CCDC93-205ENST00000466171 EIF5AL1Q6IS14 154 aaKnown RBP0.53□□□□□ -2.32
CCDC93-205ENST00000466171 C2orf82Q6UX34 121 aa0.53□□□□□ -2.32
CCDC93-205ENST00000466171 EXOC3-AS1Q8N2X6 119 aa0.53□□□□□ -2.32
CCDC93-205ENST00000466171 OR4K15Q8NH41 348 aa0.53□□□□□ -2.32
CCDC93-205ENST00000466171 OR13C6PQ8NH95 151 aa0.53□□□□□ -2.32
CCDC93-205ENST00000466171 CANT1Q8WVQ1 401 aa0.53□□□□□ -2.32
CCDC93-205ENST00000466171 C4orf3Q8WVX3 66 aa0.53□□□□□ -2.32
CCDC93-205ENST00000466171 ZHX1-C8orf76Q96EF9 292 aa0.53□□□□□ -2.32
CCDC93-205ENST00000466171 ZNF714Q96N38 554 aa0.53□□□□□ -2.32
CCDC93-205ENST00000466171 LINC00467Q9BRT7 94 aa0.53□□□□□ -2.32
CCDC93-205ENST00000466171 OR2J1Q9GZK6 312 aa0.53□□□□□ -2.32
CCDC93-205ENST00000466171 PRNDQ9UKY0 176 aa0.53□□□□□ -2.32
CCDC93-205ENST00000466171 SSR3Q9UNL2 185 aa0.53□□□□□ -2.32
CCDC93-205ENST00000466171 LY96Q9Y6Y9 160 aa0.53□□□□□ -2.32
CCDC93-205ENST00000466171 DLG5Q8TDM6 1919 aa0.52□□□□□ -2.33
CCDC93-205ENST00000466171 RP1P56715 2156 aa0.52□□□□□ -2.33
CCDC93-205ENST00000466171 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.52□□□□□ -2.33
CCDC93-205ENST00000466171 TRBV6-4A0A1B0GX49 114 aa0.52□□□□□ -2.33
CCDC93-205ENST00000466171 DUXBA0A1W2PPF3 345 aa0.52□□□□□ -2.33
CCDC93-205ENST00000466171 ODAMA1E959 279 aa0.52□□□□□ -2.33
CCDC93-205ENST00000466171 B4DSR2 109 aa0.52□□□□□ -2.33
CCDC93-205ENST00000466171 H7C1C5 153 aa0.52□□□□□ -2.33
CCDC93-205ENST00000466171 K7ERJ3 54 aa0.52□□□□□ -2.33
CCDC93-205ENST00000466171 M0R233 179 aa0.52□□□□□ -2.33
CCDC93-205ENST00000466171 AIPO00170 330 aa0.52□□□□□ -2.33
CCDC93-205ENST00000466171 IFNA1P01562 189 aa0.52□□□□□ -2.33
CCDC93-205ENST00000466171 APOA2P02652 100 aa0.52□□□□□ -2.33
CCDC93-205ENST00000466171 CRHP06850 196 aa0.52□□□□□ -2.33
CCDC93-205ENST00000466171 CXCL1P09341 107 aa0.52□□□□□ -2.33
CCDC93-205ENST00000466171 HLA-EP13747 358 aa0.52□□□□□ -2.33
CCDC93-205ENST00000466171 PPP1R2P41236 205 aa0.52□□□□□ -2.33
CCDC93-205ENST00000466171 TMBIM6P55061 237 aa0.52□□□□□ -2.33
CCDC93-205ENST00000466171 ARPP19P56211 112 aa0.52□□□□□ -2.33
CCDC93-205ENST00000466171 TAS2R41P59536 307 aa0.52□□□□□ -2.33
CCDC93-205ENST00000466171 LCN6P62502 163 aa0.52□□□□□ -2.33
CCDC93-205ENST00000466171 AKR1C8PQ5T2L2 129 aa0.52□□□□□ -2.33
CCDC93-205ENST00000466171 PPP1R2P3Q6NXS1 205 aa0.52□□□□□ -2.33
CCDC93-205ENST00000466171 C4orf22Q6V702 233 aa0.52□□□□□ -2.33
CCDC93-205ENST00000466171 GKN2Q86XP6 184 aa0.52□□□□□ -2.33
CCDC93-205ENST00000466171 SMIM20Q8N5G0 67 aa0.52□□□□□ -2.33
CCDC93-205ENST00000466171 PPTC7Q8NI37 304 aa0.52□□□□□ -2.33
CCDC93-205ENST00000466171 AP3S1Q92572 193 aa0.52□□□□□ -2.33
CCDC93-205ENST00000466171 POP5Q969H6 163 aaKnown RBP0.52□□□□□ -2.33
CCDC93-205ENST00000466171 LINC00526Q96FQ7 95 aa0.52□□□□□ -2.33
CCDC93-205ENST00000466171 TP53RKQ96S44 253 aa0.52□□□□□ -2.33
CCDC93-205ENST00000466171 GINS3Q9BRX5 216 aa0.52□□□□□ -2.33
CCDC93-205ENST00000466171 GGACTQ9BVM4 153 aa0.52□□□□□ -2.33
CCDC93-205ENST00000466171 CCDC94Q9BW85 323 aaPredicted RBP0.52□□□□□ -2.33
CCDC93-205ENST00000466171 LYRM2Q9NU23 88 aaPredicted RBP0.52□□□□□ -2.33
CCDC93-205ENST00000466171 ORMDL1Q9P0S3 153 aa0.52□□□□□ -2.33
CCDC93-205ENST00000466171 CEP164Q9UPV0 1460 aa0.52□□□□□ -2.33
CCDC93-205ENST00000466171 OBSL1O75147 1896 aa0.52□□□□□ -2.33
CCDC93-205ENST00000466171 CEP192Q8TEP8 1941 aa0.52□□□□□ -2.33
CCDC93-205ENST00000466171 MED12LQ86YW9 2145 aa0.52□□□□□ -2.33
CCDC93-205ENST00000466171 ALPK2Q86TB3 2170 aa0.52□□□□□ -2.33
CCDC93-205ENST00000466171 COL6A6A6NMZ7 2263 aa0.52□□□□□ -2.33
CCDC93-205ENST00000466171 FLG2Q5D862 2391 aaPredicted RBP0.52□□□□□ -2.33
CCDC93-205ENST00000466171 TRAV10A0A0B4J240 114 aa0.51□□□□□ -2.33
CCDC93-205ENST00000466171 RIIAD1A6NNX1 92 aa0.51□□□□□ -2.33
CCDC93-205ENST00000466171 MYH7BA7E2Y1 1941 aa0.51□□□□□ -2.33
CCDC93-205ENST00000466171 M0R2N4 97 aa0.51□□□□□ -2.33
CCDC93-205ENST00000466171 INE1O15225 51 aa0.51□□□□□ -2.33
CCDC93-205ENST00000466171 CCL25O15444 150 aa0.51□□□□□ -2.33
CCDC93-205ENST00000466171 CCL16O15467 120 aa0.51□□□□□ -2.33
CCDC93-205ENST00000466171 KLF7O75840 302 aaPredicted RBP0.51□□□□□ -2.33
CCDC93-205ENST00000466171 ERC2-IT1O76042 136 aa0.51□□□□□ -2.33
CCDC93-205ENST00000466171 IFNA14P01570 189 aa0.51□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms