RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 TMEM14CQ9P0S9 112 aa0.68□□□□□ -2.3
LRCH3-211ENST00000466054 COL1A1P02452 1464 aaPredicted RBP0.67□□□□□ -2.3
LRCH3-211ENST00000466054 A0A1W2PPM0 123 aa0.67□□□□□ -2.3
LRCH3-211ENST00000466054 NUPR1O60356 82 aa0.67□□□□□ -2.3
LRCH3-211ENST00000466054 DEFA3P59666 94 aa0.67□□□□□ -2.3
LRCH3-211ENST00000466054 ERVS71-1P61550 626 aa0.67□□□□□ -2.3
LRCH3-211ENST00000466054 SPRNQ5BIV9 151 aa0.67□□□□□ -2.3
LRCH3-211ENST00000466054 PDZD9Q8IXQ8 264 aa0.67□□□□□ -2.3
LRCH3-211ENST00000466054 CNTRLQ7Z7A1 2325 aa0.67□□□□□ -2.3
LRCH3-211ENST00000466054 IGHV1-58A0A0C4DH39 117 aa0.66□□□□□ -2.3
LRCH3-211ENST00000466054 DNAL4O96015 105 aa0.66□□□□□ -2.3
LRCH3-211ENST00000466054 CTXN2P0C2S0 81 aa0.66□□□□□ -2.3
LRCH3-211ENST00000466054 BCL2L15Q5TBC7 163 aa0.66□□□□□ -2.3
LRCH3-211ENST00000466054 KRTAP19-3Q7Z4W3 81 aa0.66□□□□□ -2.3
LRCH3-211ENST00000466054 GKN2Q86XP6 184 aa0.66□□□□□ -2.3
LRCH3-211ENST00000466054 PLPP5Q8NEB5 264 aa0.66□□□□□ -2.3
LRCH3-211ENST00000466054 STAG3L4Q8TBR4 150 aa0.66□□□□□ -2.3
LRCH3-211ENST00000466054 ORMDL1Q9P0S3 153 aa0.66□□□□□ -2.3
LRCH3-211ENST00000466054 CASP8AP2Q9UKL3 1982 aa0.66□□□□□ -2.3
LRCH3-211ENST00000466054 PLXNA4Q9HCM2 1894 aa0.65□□□□□ -2.3
LRCH3-211ENST00000466054 NDUFB3O43676 98 aa0.65□□□□□ -2.31
LRCH3-211ENST00000466054 IFNA7P01567 189 aa0.65□□□□□ -2.31
LRCH3-211ENST00000466054 ATP5G3P48201 142 aa0.65□□□□□ -2.31
LRCH3-211ENST00000466054 MYL5Q02045 173 aa0.65□□□□□ -2.31
LRCH3-211ENST00000466054 OR10K1Q8NGX5 313 aa0.65□□□□□ -2.31
LRCH3-211ENST00000466054 LINC00052Q96N35 136 aa0.65□□□□□ -2.31
LRCH3-211ENST00000466054 SLC25A21Q9BQT8 299 aaPredicted RBP0.65□□□□□ -2.31
LRCH3-211ENST00000466054 LY96Q9Y6Y9 160 aa0.65□□□□□ -2.31
LRCH3-211ENST00000466054 SNRNP200O75643 2136 aaKnown RBP0.65□□□□□ -2.31
LRCH3-211ENST00000466054 SCN8AQ9UQD0 1980 aa0.65□□□□□ -2.31
LRCH3-211ENST00000466054 ALPK3Q96L96 1907 aa0.64□□□□□ -2.31
LRCH3-211ENST00000466054 TLCD2A6NGC4 264 aa0.64□□□□□ -2.31
LRCH3-211ENST00000466054 FAM159BA6NKW6 160 aa0.64□□□□□ -2.31
LRCH3-211ENST00000466054 CST2P09228 141 aa0.64□□□□□ -2.31
LRCH3-211ENST00000466054 SERPINB9P50453 376 aa0.64□□□□□ -2.31
LRCH3-211ENST00000466054 ROMO1P60602 79 aa0.64□□□□□ -2.31
LRCH3-211ENST00000466054 FADDQ13158 208 aa0.64□□□□□ -2.31
LRCH3-211ENST00000466054 C4orf22Q6V702 233 aa0.64□□□□□ -2.31
LRCH3-211ENST00000466054 ZNF833PQ6ZTB9 187 aa0.64□□□□□ -2.31
LRCH3-211ENST00000466054 GOLT1AQ6ZVE7 132 aa0.64□□□□□ -2.31
LRCH3-211ENST00000466054 OR10X1Q8NGY0 326 aa0.64□□□□□ -2.31
LRCH3-211ENST00000466054 ARL2BPQ9Y2Y0 163 aa0.64□□□□□ -2.31
LRCH3-211ENST00000466054 FAM32AQ9Y421 112 aaKnown RBP0.64□□□□□ -2.31
LRCH3-211ENST00000466054 IGLV3-32A0A0A0MS00 114 aa0.63□□□□□ -2.31
LRCH3-211ENST00000466054 TAX1BP3O14907 124 aa0.63□□□□□ -2.31
LRCH3-211ENST00000466054 GGCTO75223 188 aaKnown RBP0.63□□□□□ -2.31
LRCH3-211ENST00000466054 EFNA4P52798 201 aa0.63□□□□□ -2.31
LRCH3-211ENST00000466054 DSCR4P56555 118 aaPredicted RBP0.63□□□□□ -2.31
LRCH3-211ENST00000466054 CANT1Q8WVQ1 401 aa0.63□□□□□ -2.31
LRCH3-211ENST00000466054 TAS2R7Q9NYW3 318 aa0.63□□□□□ -2.31
LRCH3-211ENST00000466054 ZFC3H1O60293 1989 aaKnown RBP0.63□□□□□ -2.31
LRCH3-211ENST00000466054 TRAV10A0A0B4J240 114 aa0.62□□□□□ -2.31
LRCH3-211ENST00000466054 E7EUB6 86 aa0.62□□□□□ -2.31
LRCH3-211ENST00000466054 E2F6O75461 281 aa0.62□□□□□ -2.31
LRCH3-211ENST00000466054 S100A6P06703 90 aa0.62□□□□□ -2.31
LRCH3-211ENST00000466054 CYBAP13498 195 aa0.62□□□□□ -2.31
LRCH3-211ENST00000466054 UBE2BP63146 152 aa0.62□□□□□ -2.31
LRCH3-211ENST00000466054 GRINAQ7Z429 371 aa0.62□□□□□ -2.31
LRCH3-211ENST00000466054 TEX37Q96LM6 180 aa0.62□□□□□ -2.31
LRCH3-211ENST00000466054 ENY2Q9NPA8 101 aa0.62□□□□□ -2.31
LRCH3-211ENST00000466054 PCTPQ9UKL6 214 aa0.62□□□□□ -2.31
LRCH3-211ENST00000466054 ARHGEF11O15085 1522 aa0.62□□□□□ -2.31
LRCH3-211ENST00000466054 UBR2Q8IWV8 1755 aa0.61□□□□□ -2.31
LRCH3-211ENST00000466054 SERPINA1P01009 418 aa0.61□□□□□ -2.31
LRCH3-211ENST00000466054 HSPE1P61604 102 aaKnown RBP0.61□□□□□ -2.31
LRCH3-211ENST00000466054 REEP5Q00765 189 aa0.61□□□□□ -2.31
LRCH3-211ENST00000466054 HAGHLQ6PII5 290 aaPredicted RBP0.61□□□□□ -2.31
LRCH3-211ENST00000466054 OR5D14Q8NGL3 314 aa0.61□□□□□ -2.31
LRCH3-211ENST00000466054 ZNF431Q8TF32 576 aaPredicted RBP0.61□□□□□ -2.31
LRCH3-211ENST00000466054 LYSMD1Q96S90 227 aa0.61□□□□□ -2.31
LRCH3-211ENST00000466054 OPTCQ9UBM4 332 aa0.61□□□□□ -2.31
LRCH3-211ENST00000466054 TNFSF18Q9UNG2 199 aa0.61□□□□□ -2.31
LRCH3-211ENST00000466054 PCF11O94913 1555 aaKnown RBP0.61□□□□□ -2.31
LRCH3-211ENST00000466054 A0A087WSZ3 146 aa0.6□□□□□ -2.31
LRCH3-211ENST00000466054 C17orf112F2Z3M2 114 aa0.6□□□□□ -2.31
LRCH3-211ENST00000466054 M0R378 163 aa0.6□□□□□ -2.31
LRCH3-211ENST00000466054 HMGB3O15347 200 aaKnown RBP0.6□□□□□ -2.31
LRCH3-211ENST00000466054 KLF7O75840 302 aaPredicted RBP0.6□□□□□ -2.31
LRCH3-211ENST00000466054 IFNA6P05013 189 aa0.6□□□□□ -2.31
LRCH3-211ENST00000466054 HLA-EP13747 358 aa0.6□□□□□ -2.31
LRCH3-211ENST00000466054 KRTAP26-1Q6PEX3 210 aa0.6□□□□□ -2.31
LRCH3-211ENST00000466054 C9orf16Q9BUW7 83 aa0.6□□□□□ -2.31
LRCH3-211ENST00000466054 HEATR1Q9H583 2144 aaKnown RBP0.6□□□□□ -2.31
LRCH3-211ENST00000466054 MYO18AQ92614 2054 aaKnown RBP0.6□□□□□ -2.31
LRCH3-211ENST00000466054 SIP14410 1827 aa0.59□□□□□ -2.31
LRCH3-211ENST00000466054 TMEM210A6NLX4 147 aa0.59□□□□□ -2.31
LRCH3-211ENST00000466054 ERC2-IT1O76042 136 aa0.59□□□□□ -2.31
LRCH3-211ENST00000466054 EIF5AL1Q6IS14 154 aaKnown RBP0.59□□□□□ -2.31
LRCH3-211ENST00000466054 LINC00575Q6W349 94 aa0.59□□□□□ -2.31
LRCH3-211ENST00000466054 TEN1Q86WV5 123 aa0.59□□□□□ -2.31
LRCH3-211ENST00000466054 ARMC1Q9NVT9 282 aa0.59□□□□□ -2.31
LRCH3-211ENST00000466054 CECR2Q9BXF3 1484 aa0.59□□□□□ -2.32
LRCH3-211ENST00000466054 MED12Q93074 2177 aa0.58□□□□□ -2.32
LRCH3-211ENST00000466054 OR2T8A6NH00 312 aa0.58□□□□□ -2.32
LRCH3-211ENST00000466054 TMEM256-PLSCR3K7ERE1 68 aa0.58□□□□□ -2.32
LRCH3-211ENST00000466054 CST8O60676 142 aa0.58□□□□□ -2.32
LRCH3-211ENST00000466054 C1QBP02746 253 aa0.58□□□□□ -2.32
LRCH3-211ENST00000466054 CD2P06729 351 aa0.58□□□□□ -2.32
LRCH3-211ENST00000466054 OR10J4P0C629 311 aa0.58□□□□□ -2.32
LRCH3-211ENST00000466054 TAF1AQ15573 450 aaPredicted RBP0.58□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms