RNA–Protein interactions for RNA: ENST00000465514.1

USP39-212, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-212ENST00000465514 IL22RA2Q969J5 263 aa6.91□□□□□ -1.3
USP39-212ENST00000465514 WDR12Q9GZL7 423 aaKnown RBP6.91□□□□□ -1.3
USP39-212ENST00000465514 RBKSQ9H477 322 aa6.91□□□□□ -1.3
USP39-212ENST00000465514 SAV1Q9H4B6 383 aaPredicted RBP6.91□□□□□ -1.3
USP39-212ENST00000465514 HSPB7Q9UBY9 170 aa6.91□□□□□ -1.3
USP39-212ENST00000465514 PFDN2Q9UHV9 154 aa6.91□□□□□ -1.3
USP39-212ENST00000465514 KCNIP3Q9Y2W7 256 aa6.91□□□□□ -1.3
USP39-212ENST00000465514 RFNGQ9Y644 331 aa6.91□□□□□ -1.3
USP39-212ENST00000465514 IGKV1D-37A0A075B6S9 117 aa6.9□□□□□ -1.3
USP39-212ENST00000465514 ZFP92A6NM28 416 aa6.9□□□□□ -1.3
USP39-212ENST00000465514 SMIM18P0DKX4 95 aa6.9□□□□□ -1.3
USP39-212ENST00000465514 ID1P41134 155 aa6.9□□□□□ -1.3
USP39-212ENST00000465514 CCR6P51684 374 aa6.9□□□□□ -1.3
USP39-212ENST00000465514 ZNF90Q03938 601 aa6.9□□□□□ -1.3
USP39-212ENST00000465514 GAMTQ14353 236 aa6.9□□□□□ -1.3
USP39-212ENST00000465514 SMCO1Q147U7 214 aa6.9□□□□□ -1.3
USP39-212ENST00000465514 OR8G2PQ6IF36 304 aa6.9□□□□□ -1.3
USP39-212ENST00000465514 GSG1LQ6UXU4 331 aa6.9□□□□□ -1.3
USP39-212ENST00000465514 FOXI2Q6ZQN5 318 aa6.9□□□□□ -1.3
USP39-212ENST00000465514 LYZL2Q7Z4W2 148 aa6.9□□□□□ -1.3
USP39-212ENST00000465514 CLVS1Q8IUQ0 354 aaPredicted RBP6.9□□□□□ -1.3
USP39-212ENST00000465514 ZNF709Q8N972 641 aa6.9□□□□□ -1.3
USP39-212ENST00000465514 OR4B1Q8NGF8 309 aa6.9□□□□□ -1.3
USP39-212ENST00000465514 DTD1Q8TEA8 209 aa6.9□□□□□ -1.3
USP39-212ENST00000465514 PRRT1Q99946 306 aa6.9□□□□□ -1.3
USP39-212ENST00000465514 SOCS3O14543 225 aa6.89□□□□□ -1.31
USP39-212ENST00000465514 GPX4P36969 197 aaPredicted RBP6.89□□□□□ -1.31
USP39-212ENST00000465514 PSMB3P49720 205 aa6.89□□□□□ -1.31
USP39-212ENST00000465514 KRTAP10-2P60368 255 aa6.89□□□□□ -1.31
USP39-212ENST00000465514 LYZP61626 148 aa6.89□□□□□ -1.31
USP39-212ENST00000465514 PSG9Q00887 426 aa6.89□□□□□ -1.31
USP39-212ENST00000465514 IL18Q14116 193 aa6.89□□□□□ -1.31
USP39-212ENST00000465514 SPCS2Q15005 226 aa6.89□□□□□ -1.31
USP39-212ENST00000465514 C1orf194Q5T5A4 169 aa6.89□□□□□ -1.31
USP39-212ENST00000465514 FAM222AQ5U5X8 452 aa6.89□□□□□ -1.31
USP39-212ENST00000465514 COQ8AQ8NI60 647 aa6.89□□□□□ -1.31
USP39-212ENST00000465514 SLC35E1Q96K37 410 aa6.89□□□□□ -1.31
USP39-212ENST00000465514 FAM210BQ96KR6 192 aa6.89□□□□□ -1.31
USP39-212ENST00000465514 CLUHP3Q96NS8 147 aa6.89□□□□□ -1.31
USP39-212ENST00000465514 NIPSNAP3BQ9BS92 247 aa6.89□□□□□ -1.31
USP39-212ENST00000465514 SLC35B3Q9H1N7 401 aa6.89□□□□□ -1.31
USP39-212ENST00000465514 DKK2Q9UBU2 259 aa6.89□□□□□ -1.31
USP39-212ENST00000465514 A0A0B4J2A0 478 aa6.88□□□□□ -1.31
USP39-212ENST00000465514 TEX48A0A1B0GUV7 120 aa6.88□□□□□ -1.31
USP39-212ENST00000465514 ANKRD20A5PA0PJZ0 165 aa6.88□□□□□ -1.31
USP39-212ENST00000465514 SNRPGP15A8MWD9 76 aa6.88□□□□□ -1.31
USP39-212ENST00000465514 F6UB75 175 aa6.88□□□□□ -1.31
USP39-212ENST00000465514 CTDSPLO15194 276 aa6.88□□□□□ -1.31
USP39-212ENST00000465514 HTN3P15516 51 aa6.88□□□□□ -1.31
USP39-212ENST00000465514 AKR1C4P17516 323 aa6.88□□□□□ -1.31
USP39-212ENST00000465514 ATP5IP56385 69 aaPredicted RBP6.88□□□□□ -1.31
USP39-212ENST00000465514 SUPT4H1P63272 117 aaKnown RBP6.88□□□□□ -1.31
USP39-212ENST00000465514 OR2F1Q13607 317 aa6.88□□□□□ -1.31
USP39-212ENST00000465514 ZNF79Q15937 498 aa6.88□□□□□ -1.31
USP39-212ENST00000465514 RNF212Q495C1 297 aa6.88□□□□□ -1.31
USP39-212ENST00000465514 FAM78BQ5VT40 261 aa6.88□□□□□ -1.31
USP39-212ENST00000465514 SPATA31B1PQ5VZV4 182 aa6.88□□□□□ -1.31
USP39-212ENST00000465514 EBLN2Q6P2I7 272 aa6.88□□□□□ -1.31
USP39-212ENST00000465514 C1orf158Q8N1D5 194 aa6.88□□□□□ -1.31
USP39-212ENST00000465514 C6orf223Q8N319 242 aa6.88□□□□□ -1.31
USP39-212ENST00000465514 OR1S1Q8NH92 325 aa6.88□□□□□ -1.31
USP39-212ENST00000465514 FRZBQ92765 325 aa6.88□□□□□ -1.31
USP39-212ENST00000465514 PPP1R14BQ96C90 147 aa6.88□□□□□ -1.31
USP39-212ENST00000465514 DIRAS2Q96HU8 199 aa6.88□□□□□ -1.31
USP39-212ENST00000465514 SCGB3A2Q96PL1 93 aa6.88□□□□□ -1.31
USP39-212ENST00000465514 C7orf50Q9BRJ6 194 aaKnown RBP6.88□□□□□ -1.31
USP39-212ENST00000465514 SHPKQ9UHJ6 478 aa6.88□□□□□ -1.31
USP39-212ENST00000465514 SCP2D1Q9UJQ7 156 aa6.88□□□□□ -1.31
USP39-212ENST00000465514 GOLT1BQ9Y3E0 138 aa6.88□□□□□ -1.31
USP39-212ENST00000465514 A0A0J9YX75 114 aa6.87□□□□□ -1.31
USP39-212ENST00000465514 LOC102723971A0A1B0GUV8 181 aa6.87□□□□□ -1.31
USP39-212ENST00000465514 ISLRO14498 428 aa6.87□□□□□ -1.31
USP39-212ENST00000465514 HBE1P02100 147 aa6.87□□□□□ -1.31
USP39-212ENST00000465514 FABP1P07148 127 aa6.87□□□□□ -1.31
USP39-212ENST00000465514 PAX9P55771 341 aa6.87□□□□□ -1.31
USP39-212ENST00000465514 GPR141Q7Z602 305 aa6.87□□□□□ -1.31
USP39-212ENST00000465514 OR8I2Q8N0Y5 310 aa6.87□□□□□ -1.31
USP39-212ENST00000465514 LYPD1Q8N2G4 141 aa6.87□□□□□ -1.31
USP39-212ENST00000465514 C20orf173Q96LM9 149 aa6.87□□□□□ -1.31
USP39-212ENST00000465514 TRGV9Q99603 122 aa6.87□□□□□ -1.31
USP39-212ENST00000465514 MCUBQ9NWR8 336 aa6.87□□□□□ -1.31
USP39-212ENST00000465514 RABL2AQ9UBK7 228 aaPredicted RBP6.87□□□□□ -1.31
USP39-212ENST00000465514 RABL2BQ9UNT1 228 aa6.87□□□□□ -1.31
USP39-212ENST00000465514 YTHDF2Q9Y5A9 579 aaKnown RBP6.87□□□□□ -1.31
USP39-212ENST00000465514 IGKV1OR2-108A0A075B7D4 117 aa6.86□□□□□ -1.31
USP39-212ENST00000465514 IAPPP10997 89 aa6.86□□□□□ -1.31
USP39-212ENST00000465514 ANXA3P12429 323 aa6.86□□□□□ -1.31
USP39-212ENST00000465514 SRPXP78539 464 aa6.86□□□□□ -1.31
USP39-212ENST00000465514 OXA1LQ15070 435 aa6.86□□□□□ -1.31
USP39-212ENST00000465514 RRN3P1Q2M238 152 aa6.86□□□□□ -1.31
USP39-212ENST00000465514 THAP8Q8NA92 274 aa6.86□□□□□ -1.31
USP39-212ENST00000465514 C16orf92Q96LL3 132 aa6.86□□□□□ -1.31
USP39-212ENST00000465514 MAGT1Q9H0U3 335 aa6.86□□□□□ -1.31
USP39-212ENST00000465514 RPRMQ9NS64 109 aa6.86□□□□□ -1.31
USP39-212ENST00000465514 RSL24D1Q9UHA3 163 aaKnown RBP6.86□□□□□ -1.31
USP39-212ENST00000465514 PITX3O75364 302 aa6.85□□□□□ -1.31
USP39-212ENST00000465514 GALR1P47211 349 aa6.85□□□□□ -1.31
USP39-212ENST00000465514 ALDH3B2P48448 385 aa6.85□□□□□ -1.31
USP39-212ENST00000465514 MEOX2P50222 304 aa6.85□□□□□ -1.31
USP39-212ENST00000465514 DAD1P61803 113 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms