RNA–Protein interactions for RNA: ENST00000464316.5

CCNL1-204, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 3,843 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-204ENST00000464316 C3AR1Q16581 482 aa3.13□□□□□ -1.91
CCNL1-204ENST00000464316 FAM104BQ5XKR9 115 aa3.13□□□□□ -1.91
CCNL1-204ENST00000464316 Q6ZR03 302 aa3.13□□□□□ -1.91
CCNL1-204ENST00000464316 Q86TA4 180 aa3.13□□□□□ -1.91
CCNL1-204ENST00000464316 UBALD2Q8IYN6 164 aa3.13□□□□□ -1.91
CCNL1-204ENST00000464316 LYPD1Q8N2G4 141 aa3.13□□□□□ -1.91
CCNL1-204ENST00000464316 ZCCHC24Q8N2G6 241 aaKnown RBP3.13□□□□□ -1.91
CCNL1-204ENST00000464316 SYT8Q8NBV8 401 aa3.13□□□□□ -1.91
CCNL1-204ENST00000464316 OR4C13Q8NGP0 309 aa3.13□□□□□ -1.91
CCNL1-204ENST00000464316 PPDPFLQ8WWR9 84 aa3.13□□□□□ -1.91
CCNL1-204ENST00000464316 DDB2Q92466 427 aa3.13□□□□□ -1.91
CCNL1-204ENST00000464316 C1orf159Q96HA4 380 aa3.13□□□□□ -1.91
CCNL1-204ENST00000464316 TRGV9Q99603 122 aa3.13□□□□□ -1.91
CCNL1-204ENST00000464316 DCTN5Q9BTE1 182 aa3.13□□□□□ -1.91
CCNL1-204ENST00000464316 SLC25A39Q9BZJ4 359 aaPredicted RBP3.13□□□□□ -1.91
CCNL1-204ENST00000464316 TRBV6-1A0A0K0K1D8 114 aa3.13□□□□□ -1.91
CCNL1-204ENST00000464316 INS-IGF2F8WCM5 200 aa3.13□□□□□ -1.91
CCNL1-204ENST00000464316 NKX2-8O15522 239 aa3.13□□□□□ -1.91
CCNL1-204ENST00000464316 CLEC3BP05452 202 aa3.13□□□□□ -1.91
CCNL1-204ENST00000464316 ARMS2P0C7Q2 107 aa3.13□□□□□ -1.91
CCNL1-204ENST00000464316 SCGB1C2P0DMR2 95 aa3.13□□□□□ -1.91
CCNL1-204ENST00000464316 HLA-DRB4P13762 266 aa3.13□□□□□ -1.91
CCNL1-204ENST00000464316 FOXG1P55316 489 aaPredicted RBP3.13□□□□□ -1.91
CCNL1-204ENST00000464316 SRSF9Q13242 221 aaKnown RBP eCLIP3.13□□□□□ -1.91
CCNL1-204ENST00000464316 RRN3P1Q2M238 152 aa3.13□□□□□ -1.91
CCNL1-204ENST00000464316 C12orf74Q32Q52 190 aa3.13□□□□□ -1.91
CCNL1-204ENST00000464316 LCNL1Q6ZST4 164 aa3.13□□□□□ -1.91
CCNL1-204ENST00000464316 PCP2Q8IVA1 136 aa3.13□□□□□ -1.91
CCNL1-204ENST00000464316 THAP8Q8NA92 274 aa3.13□□□□□ -1.91
CCNL1-204ENST00000464316 ABHD17AQ96GS6 310 aa3.13□□□□□ -1.91
CCNL1-204ENST00000464316 HLA-DRB4X5D2U9 266 aa3.13□□□□□ -1.91
CCNL1-204ENST00000464316 THADAQ6YHU6 1953 aa3.12□□□□□ -1.91
CCNL1-204ENST00000464316 SDK2Q58EX2 2172 aa3.12□□□□□ -1.91
CCNL1-204ENST00000464316 TRBV20-1A0A075B6N2 111 aa3.12□□□□□ -1.91
CCNL1-204ENST00000464316 IGKV1OR2-108A0A075B7D4 117 aa3.12□□□□□ -1.91
CCNL1-204ENST00000464316 LOC107984156A0A0G2JMH3 177 aa3.12□□□□□ -1.91
CCNL1-204ENST00000464316 A0A1W2PQM1 296 aa3.12□□□□□ -1.91
CCNL1-204ENST00000464316 NDUFS7O75251 213 aa3.12□□□□□ -1.91
CCNL1-204ENST00000464316 SNCGO76070 127 aa3.12□□□□□ -1.91
CCNL1-204ENST00000464316 SAA1P0DJI8 122 aaPredicted RBP3.12□□□□□ -1.91
CCNL1-204ENST00000464316 CD24P25063 80 aa3.12□□□□□ -1.91
CCNL1-204ENST00000464316 FXYD2P54710 66 aa3.12□□□□□ -1.91
CCNL1-204ENST00000464316 LYZP61626 148 aa3.12□□□□□ -1.91
CCNL1-204ENST00000464316 HOXA4Q00056 320 aaPredicted RBP3.12□□□□□ -1.91
CCNL1-204ENST00000464316 FOXI1Q12951 378 aa3.12□□□□□ -1.91
CCNL1-204ENST00000464316 GAGE2BQ13066 116 aa3.12□□□□□ -1.91
CCNL1-204ENST00000464316 CR1LQ2VPA4 569 aa3.12□□□□□ -1.91
CCNL1-204ENST00000464316 GAGE2EQ4V326 116 aa3.12□□□□□ -1.91
CCNL1-204ENST00000464316 SH2D6Q7Z4S9 175 aa3.12□□□□□ -1.91
CCNL1-204ENST00000464316 MOB3BQ86TA1 216 aa3.12□□□□□ -1.91
CCNL1-204ENST00000464316 ARL17AQ8IVW1 177 aa3.12□□□□□ -1.91
CCNL1-204ENST00000464316 C1QTNF4Q9BXJ3 329 aa3.12□□□□□ -1.91
CCNL1-204ENST00000464316 GAGE2DQ9UEU5 116 aa3.12□□□□□ -1.91
CCNL1-204ENST00000464316 PSG8Q9UQ74 426 aa3.12□□□□□ -1.91
CCNL1-204ENST00000464316 INSIG2Q9Y5U4 225 aa3.12□□□□□ -1.91
CCNL1-204ENST00000464316 DIDO1Q9BTC0 2240 aaKnown RBP3.12□□□□□ -1.91
CCNL1-204ENST00000464316 CABIN1Q9Y6J0 2220 aa3.12□□□□□ -1.91
CCNL1-204ENST00000464316 GOLGB1Q14789 3259 aaKnown RBP3.12□□□□□ -1.91
CCNL1-204ENST00000464316 TRBV25-1A0A075B6N4 114 aa3.12□□□□□ -1.91
CCNL1-204ENST00000464316 A8MWV9 139 aa3.12□□□□□ -1.91
CCNL1-204ENST00000464316 PROP1O75360 226 aa3.12□□□□□ -1.91
CCNL1-204ENST00000464316 CELA3AP09093 270 aa3.12□□□□□ -1.91
CCNL1-204ENST00000464316 EVI2AP22794 236 aa3.12□□□□□ -1.91
CCNL1-204ENST00000464316 MYCNOSP40205 109 aa3.12□□□□□ -1.91
CCNL1-204ENST00000464316 LEPP41159 167 aa3.12□□□□□ -1.91
CCNL1-204ENST00000464316 ZC2HC1BQ5TFG8 222 aa3.12□□□□□ -1.91
CCNL1-204ENST00000464316 FAM53AQ6NSI3 398 aaPredicted RBP3.12□□□□□ -1.91
CCNL1-204ENST00000464316 ZNF493Q6ZR52 646 aa3.12□□□□□ -1.91
CCNL1-204ENST00000464316 ABCA7Q8IZY2 2146 aa3.12□□□□□ -1.91
CCNL1-204ENST00000464316 GATD1Q8NB37 220 aa3.12□□□□□ -1.91
CCNL1-204ENST00000464316 TMEM167AQ8TBQ9 72 aa3.12□□□□□ -1.91
CCNL1-204ENST00000464316 Q8TCH9 128 aa3.12□□□□□ -1.91
CCNL1-204ENST00000464316 ITLN1Q8WWA0 313 aa3.12□□□□□ -1.91
CCNL1-204ENST00000464316 RND1Q92730 232 aa3.12□□□□□ -1.91
CCNL1-204ENST00000464316 C7orf69Q9H7B7 122 aa3.12□□□□□ -1.91
CCNL1-204ENST00000464316 AKIRIN1Q9H9L7 192 aaPredicted RBP3.12□□□□□ -1.91
CCNL1-204ENST00000464316 NDUFA4L2Q9NRX3 87 aa3.12□□□□□ -1.91
CCNL1-204ENST00000464316 TMEM160Q9NX00 188 aa3.12□□□□□ -1.91
CCNL1-204ENST00000464316 VWC2LB2RUY7 222 aa3.12□□□□□ -1.91
CCNL1-204ENST00000464316 SRRM5B3KS81 715 aa3.12□□□□□ -1.91
CCNL1-204ENST00000464316 TNFRSF1AP19438 455 aa3.12□□□□□ -1.91
CCNL1-204ENST00000464316 PLNP26678 52 aa3.12□□□□□ -1.91
CCNL1-204ENST00000464316 CFHR2P36980 270 aa3.12□□□□□ -1.91
CCNL1-204ENST00000464316 LOXL3P58215 753 aa3.12□□□□□ -1.91
CCNL1-204ENST00000464316 MLANAQ16655 118 aa3.12□□□□□ -1.91
CCNL1-204ENST00000464316 ALKBH6Q3KRA9 238 aa3.12□□□□□ -1.91
CCNL1-204ENST00000464316 HES3Q5TGS1 186 aa3.12□□□□□ -1.91
CCNL1-204ENST00000464316 SPINK14Q6IE38 97 aa3.12□□□□□ -1.91
CCNL1-204ENST00000464316 C6orf15Q6UXA7 325 aaPredicted RBP3.12□□□□□ -1.91
CCNL1-204ENST00000464316 SCGB1D4Q6XE38 83 aa3.12□□□□□ -1.91
CCNL1-204ENST00000464316 CD177Q8N6Q3 437 aa3.12□□□□□ -1.91
CCNL1-204ENST00000464316 TMEM75Q8N9X5 138 aa3.12□□□□□ -1.91
CCNL1-204ENST00000464316 C18orf15Q96N68 181 aa3.12□□□□□ -1.91
CCNL1-204ENST00000464316 FOXC2Q99958 501 aa3.12□□□□□ -1.91
CCNL1-204ENST00000464316 RASL11BQ9BPW5 248 aa3.12□□□□□ -1.91
CCNL1-204ENST00000464316 TMEM14CQ9P0S9 112 aa3.12□□□□□ -1.91
CCNL1-204ENST00000464316 ERG28Q9UKR5 140 aa3.12□□□□□ -1.91
CCNL1-204ENST00000464316 GTF3C1Q12789 2109 aa3.12□□□□□ -1.91
CCNL1-204ENST00000464316 COL5A1P20908 1838 aaPredicted RBP3.12□□□□□ -1.91
CCNL1-204ENST00000464316 ZNF503-AS2A6NEH8 195 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms