RNA–Protein interactions for RNA: ENST00000463446.1

EPHA4-210, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 579 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-210ENST00000463446 LYPD1Q8N2G4 141 aa5.71□□□□□ -1.5
EPHA4-210ENST00000463446 OR2K2Q8NGT1 345 aa5.71□□□□□ -1.5
EPHA4-210ENST00000463446 C20orf24Q9BUV8 137 aa5.71□□□□□ -1.5
EPHA4-210ENST00000463446 SMDT1Q9H4I9 107 aa5.71□□□□□ -1.5
EPHA4-210ENST00000463446 WFDC1Q9HC57 220 aa5.71□□□□□ -1.5
EPHA4-210ENST00000463446 TMEM167BQ9NRX6 74 aa5.71□□□□□ -1.5
EPHA4-210ENST00000463446 CSMD1Q96PZ7 3565 aa5.71□□□□□ -1.5
EPHA4-210ENST00000463446 NBPF19A0A087WUL8 3843 aa5.7□□□□□ -1.5
EPHA4-210ENST00000463446 F8P00451 2351 aa5.7□□□□□ -1.5
EPHA4-210ENST00000463446 IGKV1D-37A0A075B6S9 117 aa5.7□□□□□ -1.5
EPHA4-210ENST00000463446 IGKV1OR2-108A0A075B7D4 117 aa5.7□□□□□ -1.5
EPHA4-210ENST00000463446 TRAV1-1A0A0B4J248 108 aa5.7□□□□□ -1.5
EPHA4-210ENST00000463446 TRAV25A0A0B4J276 109 aa5.7□□□□□ -1.5
EPHA4-210ENST00000463446 CTXND1A0A1B0GTU2 59 aa5.7□□□□□ -1.5
EPHA4-210ENST00000463446 ZNF705EA8MWA4 302 aaPredicted RBP5.7□□□□□ -1.5
EPHA4-210ENST00000463446 BOLA2-SMG1P6H3BVE0 249 aa5.7□□□□□ -1.5
EPHA4-210ENST00000463446 OVOL1O14753 267 aa5.7□□□□□ -1.5
EPHA4-210ENST00000463446 IFNA1P01562 189 aa5.7□□□□□ -1.5
EPHA4-210ENST00000463446 IGHV3-48P01763 117 aa5.7□□□□□ -1.5
EPHA4-210ENST00000463446 IGHV3-23P01764 117 aa5.7□□□□□ -1.5
EPHA4-210ENST00000463446 ID1P41134 155 aa5.7□□□□□ -1.5
EPHA4-210ENST00000463446 CDC34P49427 236 aaPredicted RBP5.7□□□□□ -1.5
EPHA4-210ENST00000463446 NKX2-5P52952 324 aaPredicted RBP5.7□□□□□ -1.5
EPHA4-210ENST00000463446 PSG9Q00887 426 aa5.7□□□□□ -1.5
EPHA4-210ENST00000463446 PMS2P11Q13670 270 aa5.7□□□□□ -1.5
EPHA4-210ENST00000463446 MIC13Q5XKP0 118 aa5.7□□□□□ -1.5
EPHA4-210ENST00000463446 TOMM20LQ6UXN7 152 aa5.7□□□□□ -1.5
EPHA4-210ENST00000463446 RBPMS2Q6ZRY4 209 aaKnown RBP5.7□□□□□ -1.5
EPHA4-210ENST00000463446 PRIMA1Q86XR5 153 aa5.7□□□□□ -1.5
EPHA4-210ENST00000463446 ARL6IP6Q8N6S5 226 aa5.7□□□□□ -1.5
EPHA4-210ENST00000463446 ZNF680Q8NEM1 530 aa5.7□□□□□ -1.5
EPHA4-210ENST00000463446 OR9G4Q8NGQ1 327 aa5.7□□□□□ -1.5
EPHA4-210ENST00000463446 TMED6Q8WW62 240 aa5.7□□□□□ -1.5
EPHA4-210ENST00000463446 MBD3L1Q8WWY6 194 aa5.7□□□□□ -1.5
EPHA4-210ENST00000463446 RSG1Q9BU20 258 aa5.7□□□□□ -1.5
EPHA4-210ENST00000463446 CHRDL1Q9BU40 450 aa5.7□□□□□ -1.5
EPHA4-210ENST00000463446 SLC25A39Q9BZJ4 359 aaPredicted RBP5.7□□□□□ -1.5
EPHA4-210ENST00000463446 SEPSECSQ9HD40 501 aaKnown RBP5.7□□□□□ -1.5
EPHA4-210ENST00000463446 TMEM14CQ9P0S9 112 aa5.7□□□□□ -1.5
EPHA4-210ENST00000463446 FUT9Q9Y231 359 aa5.7□□□□□ -1.5
EPHA4-210ENST00000463446 TET2Q6N021 2002 aaPredicted RBP5.7□□□□□ -1.5
EPHA4-210ENST00000463446 ZANQ9Y493 2812 aa5.7□□□□□ -1.5
EPHA4-210ENST00000463446 VPS13CQ709C8 3753 aa5.69□□□□□ -1.5
EPHA4-210ENST00000463446 C2CD3Q4AC94 2353 aa5.69□□□□□ -1.5
EPHA4-210ENST00000463446 ZNF98A6NK75 572 aa5.69□□□□□ -1.5
EPHA4-210ENST00000463446 ZNF785A8K8V0 405 aa5.69□□□□□ -1.5
EPHA4-210ENST00000463446 A8MWP6 167 aa5.69□□□□□ -1.5
EPHA4-210ENST00000463446 SEC14L6B5MCN3 397 aa5.69□□□□□ -1.5
EPHA4-210ENST00000463446 PPP5D1E7EU14 171 aa5.69□□□□□ -1.5
EPHA4-210ENST00000463446 F6UZH7 168 aa5.69□□□□□ -1.5
EPHA4-210ENST00000463446 F8W735 103 aaPredicted RBP5.69□□□□□ -1.5
EPHA4-210ENST00000463446 CBLN1P23435 193 aa5.69□□□□□ -1.5
EPHA4-210ENST00000463446 ADMP35318 185 aa5.69□□□□□ -1.5
EPHA4-210ENST00000463446 PDE6HQ13956 83 aa5.69□□□□□ -1.5
EPHA4-210ENST00000463446 NSUN5P1Q3KNT7 163 aa5.69□□□□□ -1.5
EPHA4-210ENST00000463446 KRTAP24-1Q3LI83 254 aa5.69□□□□□ -1.5
EPHA4-210ENST00000463446 TCTEX1D4Q5JR98 221 aa5.69□□□□□ -1.5
EPHA4-210ENST00000463446 TMEM182Q6ZP80 229 aaPredicted RBP5.69□□□□□ -1.5
EPHA4-210ENST00000463446 SPATA3Q8NHX4 192 aa5.69□□□□□ -1.5
EPHA4-210ENST00000463446 SFT2D1Q8WV19 159 aa5.69□□□□□ -1.5
EPHA4-210ENST00000463446 RAB24Q969Q5 203 aa5.69□□□□□ -1.5
EPHA4-210ENST00000463446 OR5B12Q96R08 314 aa5.69□□□□□ -1.5
EPHA4-210ENST00000463446 TCEAL7Q9BRU2 100 aa5.69□□□□□ -1.5
EPHA4-210ENST00000463446 SHANK2-AS3Q9BTD1 123 aa5.69□□□□□ -1.5
EPHA4-210ENST00000463446 SMPXQ9UHP9 88 aa5.69□□□□□ -1.5
EPHA4-210ENST00000463446 ARL2-SNX15V9GYD0 113 aa5.69□□□□□ -1.5
EPHA4-210ENST00000463446 MXRA5Q9NR99 2828 aa5.68□□□□□ -1.5
EPHA4-210ENST00000463446 PLXNB1O43157 2135 aa5.68□□□□□ -1.5
EPHA4-210ENST00000463446 TLN2Q9Y4G6 2542 aa5.68□□□□□ -1.5
EPHA4-210ENST00000463446 IGHV4OR15-8A0A075B7B6 117 aa5.68□□□□□ -1.5
EPHA4-210ENST00000463446 A0A087WW49 117 aa5.68□□□□□ -1.5
EPHA4-210ENST00000463446 TRAV2A0A0B4J234 112 aa5.68□□□□□ -1.5
EPHA4-210ENST00000463446 IGHV7-4-1A0A0J9YVY3 117 aa5.68□□□□□ -1.5
EPHA4-210ENST00000463446 A0A1W2PRX2 142 aa5.68□□□□□ -1.5
EPHA4-210ENST00000463446 FBLL1A6NHQ2 334 aaKnown RBP5.68□□□□□ -1.5
EPHA4-210ENST00000463446 DNASE2O00115 360 aaPredicted RBP5.68□□□□□ -1.5
EPHA4-210ENST00000463446 BUB3O43684 328 aa5.68□□□□□ -1.5
EPHA4-210ENST00000463446 ZNF253O75346 499 aa5.68□□□□□ -1.5
EPHA4-210ENST00000463446 NDUFS6O75380 124 aaKnown RBP5.68□□□□□ -1.5
EPHA4-210ENST00000463446 HIST1H1EP10412 219 aaKnown RBP5.68□□□□□ -1.5
EPHA4-210ENST00000463446 ATF4P18848 351 aaPredicted RBP5.68□□□□□ -1.5
EPHA4-210ENST00000463446 CD33P20138 364 aa5.68□□□□□ -1.5
EPHA4-210ENST00000463446 SYNJ2BPP57105 145 aa5.68□□□□□ -1.5
EPHA4-210ENST00000463446 SNRPD3P62318 126 aaKnown RBP5.68□□□□□ -1.5
EPHA4-210ENST00000463446 RPL11P62913 178 aaKnown RBP5.68□□□□□ -1.5
EPHA4-210ENST00000463446 FHL3Q13643 280 aa5.68□□□□□ -1.5
EPHA4-210ENST00000463446 NDUFA5Q16718 116 aa5.68□□□□□ -1.5
EPHA4-210ENST00000463446 C9orf66Q5T8R8 295 aa5.68□□□□□ -1.5
EPHA4-210ENST00000463446 C10orf99Q6UWK7 81 aa5.68□□□□□ -1.5
EPHA4-210ENST00000463446 ALKAL2Q6UX46 152 aa5.68□□□□□ -1.5
EPHA4-210ENST00000463446 C8orf86Q6ZUL3 223 aa5.68□□□□□ -1.5
EPHA4-210ENST00000463446 RPP25LQ8N5L8 163 aaKnown RBP5.68□□□□□ -1.5
EPHA4-210ENST00000463446 RXFP4Q8TDU9 374 aa5.68□□□□□ -1.5
EPHA4-210ENST00000463446 DYNLRB2Q8TF09 96 aa5.68□□□□□ -1.5
EPHA4-210ENST00000463446 TMEM37Q8WXS4 190 aa5.68□□□□□ -1.5
EPHA4-210ENST00000463446 RCC1LQ96I51 464 aaKnown RBP5.68□□□□□ -1.5
EPHA4-210ENST00000463446 RAX2Q96IS3 184 aa5.68□□□□□ -1.5
EPHA4-210ENST00000463446 PAXXQ9BUH6 204 aa5.68□□□□□ -1.5
EPHA4-210ENST00000463446 OR51M1Q9H341 326 aa5.68□□□□□ -1.5
EPHA4-210ENST00000463446 HRH4Q9H3N8 390 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms