RNA–Protein interactions for RNA: ENST00000462815.5

PTPN7-204, Transcript of protein tyrosine phosphatase, non-receptor type 7, human

TSL 2

Gene PTPN7, Length 1,147 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN7-204	ENST00000462815	RPS10-NUDT3	A0A1W2PQS6	291 aa		7.92	□□□□□ -1.14
PTPN7-204	ENST00000462815	ATG12	O94817	140 aa		7.92	□□□□□ -1.14
PTPN7-204	ENST00000462815	TOMM40	O96008	361 aa		7.92	□□□□□ -1.14
PTPN7-204	ENST00000462815	OR5AC1	P0C628	307 aa		7.92	□□□□□ -1.14
PTPN7-204	ENST00000462815	SLC25A4	P12235	298 aa		7.92	□□□□□ -1.14
PTPN7-204	ENST00000462815	NKX2-1	P43699	371 aa	Predicted RBP	7.92	□□□□□ -1.14
PTPN7-204	ENST00000462815	AP2S1	P53680	142 aa	Predicted RBP	7.92	□□□□□ -1.14
PTPN7-204	ENST00000462815	PPP1R1A	Q13522	171 aa		7.92	□□□□□ -1.14
PTPN7-204	ENST00000462815	SIGLEC15	Q6ZMC9	328 aa		7.92	□□□□□ -1.14
PTPN7-204	ENST00000462815	FAM219A	Q8IW50	185 aa		7.92	□□□□□ -1.14
PTPN7-204	ENST00000462815	CCDC71L	Q8N9Z2	235 aa		7.92	□□□□□ -1.14
PTPN7-204	ENST00000462815	SLC24A4	Q8NFF2	622 aa		7.92	□□□□□ -1.14
PTPN7-204	ENST00000462815		Q8WTZ3	238 aa		7.92	□□□□□ -1.14
PTPN7-204	ENST00000462815	GPR146	Q96CH1	333 aa		7.92	□□□□□ -1.14
PTPN7-204	ENST00000462815	NARS2	Q96I59	477 aa	Known RBP	7.92	□□□□□ -1.14
PTPN7-204	ENST00000462815	FAM210B	Q96KR6	192 aa		7.92	□□□□□ -1.14
PTPN7-204	ENST00000462815	CLUHP3	Q96NS8	147 aa		7.92	□□□□□ -1.14
PTPN7-204	ENST00000462815	NAA60	Q9H7X0	242 aa		7.92	□□□□□ -1.14
PTPN7-204	ENST00000462815	IGLV2-18	A0A075B6J9	118 aa		7.91	□□□□□ -1.14
PTPN7-204	ENST00000462815	IGKV1D-37	A0A075B6S9	117 aa		7.91	□□□□□ -1.14
PTPN7-204	ENST00000462815	TEX13D	A0A0J9YY54	714 aa	Predicted RBP	7.91	□□□□□ -1.14
PTPN7-204	ENST00000462815	C9orf170	A2RU37	121 aa		7.91	□□□□□ -1.14
PTPN7-204	ENST00000462815	C7orf66	A4D0T2	115 aa		7.91	□□□□□ -1.14
PTPN7-204	ENST00000462815	SMIM9	A6NGZ8	99 aa		7.91	□□□□□ -1.14
PTPN7-204	ENST00000462815	SCGB2A1	O75556	95 aa		7.91	□□□□□ -1.14
PTPN7-204	ENST00000462815	B3GALNT1	O75752	331 aa		7.91	□□□□□ -1.14
PTPN7-204	ENST00000462815	SFT2D2	O95562	160 aa		7.91	□□□□□ -1.14
PTPN7-204	ENST00000462815	SPART-AS1	P0CW21	52 aa		7.91	□□□□□ -1.14
PTPN7-204	ENST00000462815	EIF2B2	P49770	351 aa	Known RBP	7.91	□□□□□ -1.14
PTPN7-204	ENST00000462815	NUTF2	P61970	127 aa	Known RBP	7.91	□□□□□ -1.14
PTPN7-204	ENST00000462815	SNRPD3	P62318	126 aa	Known RBP	7.91	□□□□□ -1.14
PTPN7-204	ENST00000462815	NMS	Q5H8A3	153 aa		7.91	□□□□□ -1.14
PTPN7-204	ENST00000462815	GSG1L	Q6UXU4	331 aa		7.91	□□□□□ -1.14
PTPN7-204	ENST00000462815	SELENOH	Q8IZQ5	122 aa	Known RBP	7.91	□□□□□ -1.14
PTPN7-204	ENST00000462815	NPIPB3	Q92617	1050 aa		7.91	□□□□□ -1.14
PTPN7-204	ENST00000462815	RRNAD1	Q96FB5	475 aa	Known RBP	7.91	□□□□□ -1.14
PTPN7-204	ENST00000462815	C17orf77	Q96MU5	243 aa		7.91	□□□□□ -1.14
PTPN7-204	ENST00000462815	SEC22C	Q9BRL7	303 aa		7.91	□□□□□ -1.14
PTPN7-204	ENST00000462815	SAV1	Q9H4B6	383 aa	Predicted RBP	7.91	□□□□□ -1.14
PTPN7-204	ENST00000462815	ENY2	Q9NPA8	101 aa		7.91	□□□□□ -1.14
PTPN7-204	ENST00000462815	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	7.91	□□□□□ -1.14
PTPN7-204	ENST00000462815	PLA2G2E	Q9NZK7	142 aa		7.91	□□□□□ -1.14
PTPN7-204	ENST00000462815	CACNG5	Q9UF02	275 aa		7.91	□□□□□ -1.14
PTPN7-204	ENST00000462815	TMEM189	A5PLL7	270 aa		7.9	□□□□□ -1.14
PTPN7-204	ENST00000462815		A8MTW9	85 aa		7.9	□□□□□ -1.14
PTPN7-204	ENST00000462815	PRAF2	O60831	178 aa		7.9	□□□□□ -1.14
PTPN7-204	ENST00000462815	PSG1	P11464	419 aa		7.9	□□□□□ -1.14
PTPN7-204	ENST00000462815	NPY1R	P25929	384 aa		7.9	□□□□□ -1.14
PTPN7-204	ENST00000462815	FXYD7	P58549	80 aa		7.9	□□□□□ -1.14
PTPN7-204	ENST00000462815	RNF212	Q495C1	297 aa		7.9	□□□□□ -1.14
PTPN7-204	ENST00000462815	FAM222A	Q5U5X8	452 aa		7.9	□□□□□ -1.14
PTPN7-204	ENST00000462815	C1orf158	Q8N1D5	194 aa		7.9	□□□□□ -1.14
PTPN7-204	ENST00000462815	OR51G1	Q8NGK1	321 aa		7.9	□□□□□ -1.14
PTPN7-204	ENST00000462815	ZNF431	Q8TF32	576 aa	Predicted RBP	7.9	□□□□□ -1.14
PTPN7-204	ENST00000462815	RBPMS	Q93062	196 aa	Known RBP	7.9	□□□□□ -1.14
PTPN7-204	ENST00000462815	HEYL	Q9NQ87	328 aa	Predicted RBP	7.9	□□□□□ -1.14
PTPN7-204	ENST00000462815	PRR13	Q9NZ81	148 aa		7.9	□□□□□ -1.14
PTPN7-204	ENST00000462815	KCNIP3	Q9Y2W7	256 aa		7.9	□□□□□ -1.14
PTPN7-204	ENST00000462815	RFNG	Q9Y644	331 aa		7.9	□□□□□ -1.14
PTPN7-204	ENST00000462815	ALG5	Q9Y673	324 aa		7.9	□□□□□ -1.14
PTPN7-204	ENST00000462815		A0A0B4J2A0	478 aa		7.89	□□□□□ -1.15
PTPN7-204	ENST00000462815		A0A1B0GVG6	124 aa		7.89	□□□□□ -1.15
PTPN7-204	ENST00000462815	SNRPGP15	A8MWD9	76 aa		7.89	□□□□□ -1.15
PTPN7-204	ENST00000462815	RD3L	P0DJH9	198 aa		7.89	□□□□□ -1.15
PTPN7-204	ENST00000462815	PAX9	P55771	341 aa		7.89	□□□□□ -1.15
PTPN7-204	ENST00000462815	C4orf46	Q504U0	113 aa		7.89	□□□□□ -1.15
PTPN7-204	ENST00000462815	FOXI2	Q6ZQN5	318 aa		7.89	□□□□□ -1.15
PTPN7-204	ENST00000462815	LRTM2	Q8N967	370 aa		7.89	□□□□□ -1.15
PTPN7-204	ENST00000462815	MITD1	Q8WV92	249 aa		7.89	□□□□□ -1.15
PTPN7-204	ENST00000462815	RNF125	Q96EQ8	232 aa		7.89	□□□□□ -1.15
PTPN7-204	ENST00000462815	NIPSNAP3B	Q9BS92	247 aa		7.89	□□□□□ -1.15
PTPN7-204	ENST00000462815	SLC35B3	Q9H1N7	401 aa		7.89	□□□□□ -1.15
PTPN7-204	ENST00000462815	SHPK	Q9UHJ6	478 aa		7.89	□□□□□ -1.15
PTPN7-204	ENST00000462815	TMEM56-RWDD3	S4R434	201 aa		7.89	□□□□□ -1.15
PTPN7-204	ENST00000462815	IFNA10	P01566	189 aa		7.88	□□□□□ -1.15
PTPN7-204	ENST00000462815	IFNA21	P01568	189 aa		7.88	□□□□□ -1.15
PTPN7-204	ENST00000462815	IGKV3-20	P01619	116 aa		7.88	□□□□□ -1.15
PTPN7-204	ENST00000462815	VAMP1	P23763	118 aa		7.88	□□□□□ -1.15
PTPN7-204	ENST00000462815	PSMB3	P49720	205 aa		7.88	□□□□□ -1.15
PTPN7-204	ENST00000462815	EMP1	P54849	157 aa		7.88	□□□□□ -1.15
PTPN7-204	ENST00000462815	OR8G2P	Q6IF36	304 aa		7.88	□□□□□ -1.15
PTPN7-204	ENST00000462815	AMTN	Q6UX39	209 aa		7.88	□□□□□ -1.15
PTPN7-204	ENST00000462815	UBE2DNL	Q8IWF7	75 aa		7.88	□□□□□ -1.15
PTPN7-204	ENST00000462815	ACY3	Q96HD9	319 aa		7.88	□□□□□ -1.15
PTPN7-204	ENST00000462815		A0A0J9YX75	114 aa		7.87	□□□□□ -1.15
PTPN7-204	ENST00000462815	TEX48	A0A1B0GUV7	120 aa		7.87	□□□□□ -1.15
PTPN7-204	ENST00000462815	CEBPZOS	A8MTT3	80 aa		7.87	□□□□□ -1.15
PTPN7-204	ENST00000462815		F6UB75	175 aa		7.87	□□□□□ -1.15
PTPN7-204	ENST00000462815	ANXA3	P12429	323 aa		7.87	□□□□□ -1.15
PTPN7-204	ENST00000462815	ZNF90	Q03938	601 aa		7.87	□□□□□ -1.15
PTPN7-204	ENST00000462815	TMEM268	Q5VZI3	342 aa		7.87	□□□□□ -1.15
PTPN7-204	ENST00000462815	ETFRF1	Q6IPR1	90 aa		7.87	□□□□□ -1.15
PTPN7-204	ENST00000462815	TMEM88	Q6PEY1	159 aa		7.87	□□□□□ -1.15
PTPN7-204	ENST00000462815	C12orf45	Q8N5I9	185 aa	Predicted RBP	7.87	□□□□□ -1.15
PTPN7-204	ENST00000462815	RNASE11	Q8TAA1	199 aa	Known RBP	7.87	□□□□□ -1.15
PTPN7-204	ENST00000462815	IL22RA2	Q969J5	263 aa		7.87	□□□□□ -1.15
PTPN7-204	ENST00000462815	C20orf173	Q96LM9	149 aa		7.87	□□□□□ -1.15
PTPN7-204	ENST00000462815	GPN1	Q9HCN4	374 aa	Predicted RBP	7.87	□□□□□ -1.15
PTPN7-204	ENST00000462815	HSPB7	Q9UBY9	170 aa		7.87	□□□□□ -1.15
PTPN7-204	ENST00000462815	YTHDF2	Q9Y5A9	579 aa	Known RBP	7.87	□□□□□ -1.15

Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms