RNA–Protein interactions for RNA: ENST00000462482.1

SKA3-204, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-204ENST00000462482 GDF5OSQ5U4N7 250 aa11.02□□□□□ -0.65
SKA3-204ENST00000462482 NIPSNAP3BQ9BS92 247 aa11.02□□□□□ -0.65
SKA3-204ENST00000462482 WDR12Q9GZL7 423 aaKnown RBP11.02□□□□□ -0.65
SKA3-204ENST00000462482 RPRMQ9NS64 109 aa11.02□□□□□ -0.65
SKA3-204ENST00000462482 NOL3O60936 208 aaKnown RBP11.01□□□□□ -0.65
SKA3-204ENST00000462482 MED6O75586 246 aa11.01□□□□□ -0.65
SKA3-204ENST00000462482 HTN3P15516 51 aa11.01□□□□□ -0.65
SKA3-204ENST00000462482 GALR1P47211 349 aa11.01□□□□□ -0.65
SKA3-204ENST00000462482 LGALS9BQ3B8N2 356 aa11.01□□□□□ -0.65
SKA3-204ENST00000462482 SOHLH1Q5JUK2 328 aa11.01□□□□□ -0.65
SKA3-204ENST00000462482 FAM222AQ5U5X8 452 aa11.01□□□□□ -0.65
SKA3-204ENST00000462482 GGNBP1Q5YKI7 109 aa11.01□□□□□ -0.65
SKA3-204ENST00000462482 C16orf92Q96LL3 132 aa11.01□□□□□ -0.65
SKA3-204ENST00000462482 TRGV9Q99603 122 aa11.01□□□□□ -0.65
SKA3-204ENST00000462482 TMEM208Q9BTX3 173 aa11.01□□□□□ -0.65
SKA3-204ENST00000462482 MAGT1Q9H0U3 335 aa11.01□□□□□ -0.65
SKA3-204ENST00000462482 CCDC59Q9P031 241 aaKnown RBP11.01□□□□□ -0.65
SKA3-204ENST00000462482 VPS13DQ5THJ4 4388 aa11.01□□□□□ -0.65
SKA3-204ENST00000462482 LOC102723971A0A1B0GUV8 181 aa11□□□□□ -0.65
SKA3-204ENST00000462482 DUXBA0A1W2PPF3 345 aa11□□□□□ -0.65
SKA3-204ENST00000462482 DEFB1P60022 68 aa11□□□□□ -0.65
SKA3-204ENST00000462482 RRN3P1Q2M238 152 aa11□□□□□ -0.65
SKA3-204ENST00000462482 FAM78BQ5VT40 261 aa11□□□□□ -0.65
SKA3-204ENST00000462482 RAB2BQ8WUD1 216 aa11□□□□□ -0.65
SKA3-204ENST00000462482 CIB3Q96Q77 187 aaPredicted RBP11□□□□□ -0.65
SKA3-204ENST00000462482 SCRT1Q9BWW7 348 aa11□□□□□ -0.65
SKA3-204ENST00000462482 DKK2Q9UBU2 259 aa11□□□□□ -0.65
SKA3-204ENST00000462482 IGKV1D-37A0A075B6S9 117 aa10.99□□□□□ -0.65
SKA3-204ENST00000462482 FABP12A6NFH5 140 aa10.99□□□□□ -0.65
SKA3-204ENST00000462482 MED14OSP0DP75 135 aa10.99□□□□□ -0.65
SKA3-204ENST00000462482 IAPPP10997 89 aa10.99□□□□□ -0.65
SKA3-204ENST00000462482 PAX9P55771 341 aa10.99□□□□□ -0.65
SKA3-204ENST00000462482 AP3S2P59780 193 aa10.99□□□□□ -0.65
SKA3-204ENST00000462482 OXA1LQ15070 435 aa10.99□□□□□ -0.65
SKA3-204ENST00000462482 ZNF79Q15937 498 aa10.99□□□□□ -0.65
SKA3-204ENST00000462482 TMED4Q7Z7H5 227 aa10.99□□□□□ -0.65
SKA3-204ENST00000462482 SLC35B3Q9H1N7 401 aa10.99□□□□□ -0.65
SKA3-204ENST00000462482 HECTD4Q9Y4D8 3996 aa10.99□□□□□ -0.65
SKA3-204ENST00000462482 A0A0J9YX75 114 aa10.98□□□□□ -0.65
SKA3-204ENST00000462482 SOCS3O14543 225 aa10.98□□□□□ -0.65
SKA3-204ENST00000462482 VAMP1P23763 118 aa10.98□□□□□ -0.65
SKA3-204ENST00000462482 ALDH3B2P48448 385 aa10.98□□□□□ -0.65
SKA3-204ENST00000462482 DAD1P61803 113 aa10.98□□□□□ -0.65
SKA3-204ENST00000462482 RNF212Q495C1 297 aa10.98□□□□□ -0.65
SKA3-204ENST00000462482 ZNF709Q8N972 641 aa10.98□□□□□ -0.65
SKA3-204ENST00000462482 BPIFCQ8NFQ6 507 aa10.98□□□□□ -0.65
SKA3-204ENST00000462482 BCL7BQ9BQE9 202 aa10.98□□□□□ -0.65
SKA3-204ENST00000462482 SLC25A22Q9H936 323 aa10.98□□□□□ -0.65
SKA3-204ENST00000462482 DOK5Q9P104 306 aa10.98□□□□□ -0.65
SKA3-204ENST00000462482 SLC45A2Q9UMX9 530 aa10.98□□□□□ -0.65
SKA3-204ENST00000462482 YTHDF2Q9Y5A9 579 aaKnown RBP10.98□□□□□ -0.65
SKA3-204ENST00000462482 IGLV2-18A0A075B6J9 118 aa10.97□□□□□ -0.65
SKA3-204ENST00000462482 A0A1B0GVY2 172 aa10.97□□□□□ -0.65
SKA3-204ENST00000462482 F6UB75 175 aa10.97□□□□□ -0.65
SKA3-204ENST00000462482 TMEM128Q5BJH2 165 aa10.97□□□□□ -0.65
SKA3-204ENST00000462482 GSG1LQ6UXU4 331 aa10.97□□□□□ -0.65
SKA3-204ENST00000462482 DYNC2LI1Q8TCX1 351 aa10.97□□□□□ -0.65
SKA3-204ENST00000462482 GPR82Q96P67 336 aa10.97□□□□□ -0.65
SKA3-204ENST00000462482 RSG1Q9BU20 258 aa10.97□□□□□ -0.65
SKA3-204ENST00000462482 TMEM147Q9BVK8 224 aa10.97□□□□□ -0.65
SKA3-204ENST00000462482 TMED3Q9Y3Q3 217 aa10.97□□□□□ -0.65
SKA3-204ENST00000462482 RTL8CO15255 209 aa10.96□□□□□ -0.65
SKA3-204ENST00000462482 DUSP14O95147 198 aaKnown RBP10.96□□□□□ -0.65
SKA3-204ENST00000462482 SLC25A6P12236 298 aa10.96□□□□□ -0.65
SKA3-204ENST00000462482 ORM2P19652 201 aa10.96□□□□□ -0.65
SKA3-204ENST00000462482 TMBIM6P55061 237 aa10.96□□□□□ -0.65
SKA3-204ENST00000462482 AKR1C1Q04828 323 aa10.96□□□□□ -0.65
SKA3-204ENST00000462482 C1orf158Q8N1D5 194 aa10.96□□□□□ -0.65
SKA3-204ENST00000462482 THAP8Q8NA92 274 aa10.96□□□□□ -0.65
SKA3-204ENST00000462482 OR1B1Q8NGR6 318 aa10.96□□□□□ -0.65
SKA3-204ENST00000462482 IGF2BP2-AS1Q96M15 143 aa10.96□□□□□ -0.65
SKA3-204ENST00000462482 ZNF98A6NK75 572 aa10.95□□□□□ -0.66
SKA3-204ENST00000462482 PITX3O75364 302 aa10.95□□□□□ -0.66
SKA3-204ENST00000462482 TNFSF8P32971 234 aa10.95□□□□□ -0.66
SKA3-204ENST00000462482 TOMM5Q8N4H5 51 aa10.95□□□□□ -0.66
SKA3-204ENST00000462482 OR4D5Q8NGN0 318 aa10.95□□□□□ -0.66
SKA3-204ENST00000462482 ATG101Q9BSB4 218 aa10.95□□□□□ -0.66
SKA3-204ENST00000462482 SLC25A32Q9H2D1 315 aa10.95□□□□□ -0.66
SKA3-204ENST00000462482 PLA2G2EQ9NZK7 142 aa10.95□□□□□ -0.66
SKA3-204ENST00000462482 AGRNO00468 2067 aa10.94□□□□□ -0.66
SKA3-204ENST00000462482 WRBO00258 174 aa10.94□□□□□ -0.66
SKA3-204ENST00000462482 SYNGR2O43760 224 aa10.94□□□□□ -0.66
SKA3-204ENST00000462482 INSP01308 110 aa10.94□□□□□ -0.66
SKA3-204ENST00000462482 B2MP61769 119 aa10.94□□□□□ -0.66
SKA3-204ENST00000462482 PYDC2Q56P42 97 aa10.94□□□□□ -0.66
SKA3-204ENST00000462482 SPANXN5Q5MJ07 72 aa10.94□□□□□ -0.66
SKA3-204ENST00000462482 TMEM88Q6PEY1 159 aa10.94□□□□□ -0.66
SKA3-204ENST00000462482 S100A7AQ86SG5 101 aa10.94□□□□□ -0.66
SKA3-204ENST00000462482 C15orf53Q8NAA6 179 aa10.94□□□□□ -0.66
SKA3-204ENST00000462482 MCFD2Q8NI22 146 aa10.94□□□□□ -0.66
SKA3-204ENST00000462482 FAM3BP58499 235 aaPredicted RBP10.93□□□□□ -0.66
SKA3-204ENST00000462482 RAP2BP61225 183 aa10.93□□□□□ -0.66
SKA3-204ENST00000462482 FGL1Q08830 312 aa10.93□□□□□ -0.66
SKA3-204ENST00000462482 C1orf134Q5TEV5 83 aa10.93□□□□□ -0.66
SKA3-204ENST00000462482 LRTM2Q8N967 370 aa10.93□□□□□ -0.66
SKA3-204ENST00000462482 SLC25A21Q9BQT8 299 aaPredicted RBP10.93□□□□□ -0.66
SKA3-204ENST00000462482 PPP1R14DQ9NXH3 145 aa10.93□□□□□ -0.66
SKA3-204ENST00000462482 STRAPQ9Y3F4 350 aaKnown RBP10.93□□□□□ -0.66
SKA3-204ENST00000462482 DNAH6Q9C0G6 4158 aa10.93□□□□□ -0.66
SKA3-204ENST00000462482 KIAA1109Q2LD37 5005 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms