RNA–Protein interactions for RNA: ENST00000461972.5

FAM228B-202, Transcript of family with sequence similarity 228 member B, humanhuman

TSL 2

Gene FAM228B, Length 2,616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-202ENST00000461972 SOX21Q9Y651 276 aaPredicted RBP15.74■□□□□ 0.11
FAM228B-202ENST00000461972 FBN2P35556 2912 aa15.73■□□□□ 0.11
FAM228B-202ENST00000461972 IGHV3OR16-8A0A075B7F1 116 aa15.73■□□□□ 0.11
FAM228B-202ENST00000461972 LINC00587B1AMM8 73 aa15.73■□□□□ 0.11
FAM228B-202ENST00000461972 IER3P46695 156 aa15.73■□□□□ 0.11
FAM228B-202ENST00000461972 ZNF562Q6V9R5 426 aa15.73■□□□□ 0.11
FAM228B-202ENST00000461972 TCEAL7Q9BRU2 100 aa15.73■□□□□ 0.11
FAM228B-202ENST00000461972 ZNF586Q9NXT0 402 aa15.73■□□□□ 0.11
FAM228B-202ENST00000461972 IGHV3-35A0A0C4DH35 117 aa15.73■□□□□ 0.11
FAM228B-202ENST00000461972 F8W735 103 aaPredicted RBP15.73■□□□□ 0.11
FAM228B-202ENST00000461972 AMBPP02760 352 aa15.73■□□□□ 0.11
FAM228B-202ENST00000461972 BAGE2Q86Y30 109 aa15.73■□□□□ 0.11
FAM228B-202ENST00000461972 TMEM183AQ8IXX5 376 aa15.73■□□□□ 0.11
FAM228B-202ENST00000461972 CDC42EP3Q9UKI2 254 aa15.73■□□□□ 0.11
FAM228B-202ENST00000461972 EPDR1Q9UM22 224 aa15.73■□□□□ 0.11
FAM228B-202ENST00000461972 TRAV8-1A0A0A6YYK1 113 aa15.72■□□□□ 0.11
FAM228B-202ENST00000461972 NDUFB8O95169 186 aa15.72■□□□□ 0.11
FAM228B-202ENST00000461972 IBA57Q5T440 356 aaKnown RBP15.72■□□□□ 0.11
FAM228B-202ENST00000461972 LRRK2Q5S007 2527 aa15.72■□□□□ 0.11
FAM228B-202ENST00000461972 ZANQ9Y493 2812 aa15.72■□□□□ 0.11
FAM228B-202ENST00000461972 IGHV7-81A0A0B4J1V7 117 aa15.72■□□□□ 0.11
FAM228B-202ENST00000461972 OR2J3O76001 311 aa15.72■□□□□ 0.11
FAM228B-202ENST00000461972 RPEL1Q2QD12 228 aa15.72■□□□□ 0.11
FAM228B-202ENST00000461972 PACRGQ96M98 296 aaPredicted RBP15.72■□□□□ 0.11
FAM228B-202ENST00000461972 HIST1H1BP16401 226 aaKnown RBP15.71■□□□□ 0.11
FAM228B-202ENST00000461972 CNN1P51911 297 aaKnown RBP15.71■□□□□ 0.11
FAM228B-202ENST00000461972 PLP1P60201 277 aa15.71■□□□□ 0.11
FAM228B-202ENST00000461972 LINC00322Q6ZN03 302 aaPredicted RBP15.71■□□□□ 0.11
FAM228B-202ENST00000461972 Q8N9W7 124 aa15.71■□□□□ 0.11
FAM228B-202ENST00000461972 OR1L6Q8NGR2 347 aa15.71■□□□□ 0.11
FAM228B-202ENST00000461972 Q9H3A6 140 aa15.71■□□□□ 0.11
FAM228B-202ENST00000461972 MRPL27Q9P0M9 148 aaKnown RBP15.71■□□□□ 0.11
FAM228B-202ENST00000461972 IL4P05112 153 aa15.71■□□□□ 0.11
FAM228B-202ENST00000461972 ZNF491Q8N8L2 437 aa15.71■□□□□ 0.11
FAM228B-202ENST00000461972 IGLV11-55A0A075B6I3 123 aa15.7■□□□□ 0.1
FAM228B-202ENST00000461972 IGHV4-61A0A0C4DH41 118 aa15.7■□□□□ 0.1
FAM228B-202ENST00000461972 CCDC144NLQ6NUI1 221 aa15.7■□□□□ 0.1
FAM228B-202ENST00000461972 USP9YO00507 2555 aaPredicted RBP15.7■□□□□ 0.1
FAM228B-202ENST00000461972 F2Z2F3 143 aa15.7■□□□□ 0.1
FAM228B-202ENST00000461972 FABP1P07148 127 aa15.7■□□□□ 0.1
FAM228B-202ENST00000461972 USF2Q15853 346 aaPredicted RBP15.7■□□□□ 0.1
FAM228B-202ENST00000461972 MRPL54Q6P161 138 aaKnown RBP15.7■□□□□ 0.1
FAM228B-202ENST00000461972 EPG5Q9HCE0 2579 aa15.7■□□□□ 0.1
FAM228B-202ENST00000461972 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.7■□□□□ 0.1
FAM228B-202ENST00000461972 ZNF705GA8MUZ8 300 aaPredicted RBP15.69■□□□□ 0.1
FAM228B-202ENST00000461972 UBE2E1P51965 193 aa15.69■□□□□ 0.1
FAM228B-202ENST00000461972 EBI3Q14213 229 aa15.69■□□□□ 0.1
FAM228B-202ENST00000461972 KIAA1644Q3SXP7 199 aa15.69■□□□□ 0.1
FAM228B-202ENST00000461972 MINOS1Q5TGZ0 78 aa15.69■□□□□ 0.1
FAM228B-202ENST00000461972 MINOS1-NBL1R4GNA1 71 aa15.69■□□□□ 0.1
FAM228B-202ENST00000461972 CENPVL3A0A0U1RRI6 287 aa15.69■□□□□ 0.1
FAM228B-202ENST00000461972 BRD3OSQ6XYD6 125 aa15.69■□□□□ 0.1
FAM228B-202ENST00000461972 OSTCQ9NRP0 149 aa15.69■□□□□ 0.1
FAM228B-202ENST00000461972 OR2T8A6NH00 312 aa15.68■□□□□ 0.1
FAM228B-202ENST00000461972 FCGR2BP31994 310 aaPredicted RBP15.68■□□□□ 0.1
FAM228B-202ENST00000461972 TMEM219Q86XT9 240 aa15.68■□□□□ 0.1
FAM228B-202ENST00000461972 NUDT10Q8NFP7 164 aa15.68■□□□□ 0.1
FAM228B-202ENST00000461972 NUDT11Q96G61 164 aa15.68■□□□□ 0.1
FAM228B-202ENST00000461972 MRPL18Q9H0U6 180 aaKnown RBP15.68■□□□□ 0.1
FAM228B-202ENST00000461972 YPEL3P61236 119 aaPredicted RBP15.68■□□□□ 0.1
FAM228B-202ENST00000461972 CTAG1AP78358 180 aa15.68■□□□□ 0.1
FAM228B-202ENST00000461972 SRSF8Q9BRL6 282 aaKnown RBP15.68■□□□□ 0.1
FAM228B-202ENST00000461972 TP53TG3Q9ULZ0 132 aa15.68■□□□□ 0.1
FAM228B-202ENST00000461972 CSPG4Q6UVK1 2322 aa15.68■□□□□ 0.1
FAM228B-202ENST00000461972 SNURFLB1AK76 121 aa15.67■□□□□ 0.1
FAM228B-202ENST00000461972 GNG7O60262 68 aa15.67■□□□□ 0.1
FAM228B-202ENST00000461972 TAS2R60P59551 318 aa15.67■□□□□ 0.1
FAM228B-202ENST00000461972 BTF3L4Q96K17 158 aa15.67■□□□□ 0.1
FAM228B-202ENST00000461972 G3V318 75 aa15.67■□□□□ 0.1
FAM228B-202ENST00000461972 ECSCRQ19T08 205 aa15.67■□□□□ 0.1
FAM228B-202ENST00000461972 Q56UQ5 140 aa15.67■□□□□ 0.1
FAM228B-202ENST00000461972 COA6Q5JTJ3 125 aaKnown RBP15.67■□□□□ 0.1
FAM228B-202ENST00000461972 STXBP6Q8NFX7 210 aa15.67■□□□□ 0.1
FAM228B-202ENST00000461972 RNF125Q96EQ8 232 aa15.67■□□□□ 0.1
FAM228B-202ENST00000461972 TTC9CQ8N5M4 171 aa15.66■□□□□ 0.1
FAM228B-202ENST00000461972 C7orf69Q9H7B7 122 aa15.66■□□□□ 0.1
FAM228B-202ENST00000461972 PDLIM4P50479 330 aa15.66■□□□□ 0.1
FAM228B-202ENST00000461972 TMEM183BQ1AE95 376 aa15.66■□□□□ 0.1
FAM228B-202ENST00000461972 CHRDL1Q9BU40 450 aa15.66■□□□□ 0.1
FAM228B-202ENST00000461972 TMUB1Q9BVT8 246 aa15.66■□□□□ 0.1
FAM228B-202ENST00000461972 NPIPB5A8MRT5 1133 aa15.65■□□□□ 0.1
FAM228B-202ENST00000461972 TCRAP04437 139 aa15.65■□□□□ 0.1
FAM228B-202ENST00000461972 FAM106CPP0CH98 169 aa15.65■□□□□ 0.1
FAM228B-202ENST00000461972 CD33P20138 364 aa15.65■□□□□ 0.1
FAM228B-202ENST00000461972 UBE2G1P62253 170 aa15.65■□□□□ 0.1
FAM228B-202ENST00000461972 CCL19Q99731 98 aa15.65■□□□□ 0.1
FAM228B-202ENST00000461972 LINC00527Q9UJ94 153 aa15.65■□□□□ 0.1
FAM228B-202ENST00000461972 VWC2LB2RUY7 222 aa15.65■□□□□ 0.1
FAM228B-202ENST00000461972 NPFFO15130 113 aa15.65■□□□□ 0.1
FAM228B-202ENST00000461972 LINC00310P59036 64 aa15.65■□□□□ 0.1
FAM228B-202ENST00000461972 BBC3Q96PG8 261 aaPredicted RBP15.65■□□□□ 0.1
FAM228B-202ENST00000461972 SHANK2-AS3Q9BTD1 123 aa15.65■□□□□ 0.1
FAM228B-202ENST00000461972 ATP6V0E1O15342 81 aa15.64■□□□□ 0.1
FAM228B-202ENST00000461972 C21orf62Q9NYP8 219 aa15.64■□□□□ 0.1
FAM228B-202ENST00000461972 OOSP1A8MZH6 123 aa15.64■□□□□ 0.09
FAM228B-202ENST00000461972 TOMM40O96008 361 aa15.64■□□□□ 0.09
FAM228B-202ENST00000461972 RAB4BP61018 213 aa15.64■□□□□ 0.09
FAM228B-202ENST00000461972 IGHV4-30-2A0A087WSY4 118 aa15.64■□□□□ 0.09
FAM228B-202ENST00000461972 SMIM27A0A1W2PRY6 76 aa15.64■□□□□ 0.09
FAM228B-202ENST00000461972 M0R3E3 92 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms