RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 NCBP2LA6PVI3 153 aaKnown RBP12.48□□□□□ -0.41
LMNB1-203ENST00000460265 PRCDQ00LT1 54 aa12.48□□□□□ -0.41
LMNB1-203ENST00000460265 FAM71F2Q6NXP2 309 aa12.48□□□□□ -0.41
LMNB1-203ENST00000460265 OR1N2Q8NGR9 330 aa12.48□□□□□ -0.41
LMNB1-203ENST00000460265 OSR1Q8TAX0 266 aaPredicted RBP12.48□□□□□ -0.41
LMNB1-203ENST00000460265 FBXL15Q9H469 300 aa12.48□□□□□ -0.41
LMNB1-203ENST00000460265 CTSZQ9UBR2 303 aa12.48□□□□□ -0.41
LMNB1-203ENST00000460265 TET2Q6N021 2002 aaPredicted RBP12.48□□□□□ -0.41
LMNB1-203ENST00000460265 TRBV9A0A0B4J1U6 114 aa12.47□□□□□ -0.41
LMNB1-203ENST00000460265 MT-ND6P03923 174 aa12.47□□□□□ -0.41
LMNB1-203ENST00000460265 TMEM14BQ9NUH8 114 aa12.47□□□□□ -0.41
LMNB1-203ENST00000460265 FOXA2Q9Y261 457 aaPredicted RBP12.47□□□□□ -0.41
LMNB1-203ENST00000460265 TIMM8BQ9Y5J9 83 aaPredicted RBP12.47□□□□□ -0.41
LMNB1-203ENST00000460265 CENPEQ02224 2701 aa12.47□□□□□ -0.41
LMNB1-203ENST00000460265 TRAV9-1A0A075B6T8 112 aa12.47□□□□□ -0.41
LMNB1-203ENST00000460265 USF1P22415 310 aaPredicted RBP12.47□□□□□ -0.41
LMNB1-203ENST00000460265 MEF2CQ06413 473 aaPredicted RBP12.47□□□□□ -0.41
LMNB1-203ENST00000460265 RNASEKQ6P5S7 137 aaKnown RBP12.47□□□□□ -0.41
LMNB1-203ENST00000460265 TPSG1Q9NRR2 321 aa12.47□□□□□ -0.41
LMNB1-203ENST00000460265 PEF1Q9UBV8 284 aaKnown RBP12.47□□□□□ -0.41
LMNB1-203ENST00000460265 YTHDF2Q9Y5A9 579 aaKnown RBP12.47□□□□□ -0.41
LMNB1-203ENST00000460265 B9A039 149 aa12.47□□□□□ -0.41
LMNB1-203ENST00000460265 STAG3L2P0CL84 134 aa12.47□□□□□ -0.41
LMNB1-203ENST00000460265 STAG3L3P0CL85 134 aa12.47□□□□□ -0.41
LMNB1-203ENST00000460265 ZNF835Q9Y2P0 537 aa12.47□□□□□ -0.41
LMNB1-203ENST00000460265 TRAV8-6A0A0B4J262 113 aa12.46□□□□□ -0.41
LMNB1-203ENST00000460265 H0YJW9 148 aa12.46□□□□□ -0.41
LMNB1-203ENST00000460265 NDUFS8O00217 210 aa12.46□□□□□ -0.41
LMNB1-203ENST00000460265 PTPRBP23467 1997 aa12.46□□□□□ -0.41
LMNB1-203ENST00000460265 PYYP10082 97 aa12.46□□□□□ -0.41
LMNB1-203ENST00000460265 UBE2G1P62253 170 aa12.46□□□□□ -0.41
LMNB1-203ENST00000460265 BVES-AS1Q5T3Y7 98 aa12.46□□□□□ -0.41
LMNB1-203ENST00000460265 SLC25A34Q6PIV7 304 aa12.46□□□□□ -0.41
LMNB1-203ENST00000460265 ZNF841Q6ZN19 808 aa12.46□□□□□ -0.41
LMNB1-203ENST00000460265 VKORC1Q9BQB6 163 aa12.46□□□□□ -0.41
LMNB1-203ENST00000460265 COL25A1Q9BXS0 654 aaPredicted RBP12.46□□□□□ -0.41
LMNB1-203ENST00000460265 FNDC4Q9H6D8 234 aaPredicted RBP12.46□□□□□ -0.41
LMNB1-203ENST00000460265 E7EUB6 86 aa12.46□□□□□ -0.42
LMNB1-203ENST00000460265 CNTFRP26992 372 aa12.46□□□□□ -0.42
LMNB1-203ENST00000460265 RPL27AP46776 148 aaKnown RBP12.46□□□□□ -0.42
LMNB1-203ENST00000460265 PPOXP50336 477 aa12.46□□□□□ -0.42
LMNB1-203ENST00000460265 C10orf113Q5VZT2 155 aa12.46□□□□□ -0.42
LMNB1-203ENST00000460265 DEFB125Q8N687 156 aa12.46□□□□□ -0.42
LMNB1-203ENST00000460265 DDB2Q92466 427 aa12.46□□□□□ -0.42
LMNB1-203ENST00000460265 DLL1O00548 723 aa12.45□□□□□ -0.42
LMNB1-203ENST00000460265 CGB3P0DN86 165 aa12.45□□□□□ -0.42
LMNB1-203ENST00000460265 CGB7P0DN87 165 aa12.45□□□□□ -0.42
LMNB1-203ENST00000460265 FAM222BQ8WU58 562 aa12.45□□□□□ -0.42
LMNB1-203ENST00000460265 ZNF331Q9NQX6 463 aaPredicted RBP12.45□□□□□ -0.42
LMNB1-203ENST00000460265 APCSP02743 223 aa12.45□□□□□ -0.42
LMNB1-203ENST00000460265 LYZP61626 148 aa12.45□□□□□ -0.42
LMNB1-203ENST00000460265 RAB1BQ9H0U4 201 aa12.45□□□□□ -0.42
LMNB1-203ENST00000460265 H0Y8G0 127 aa12.45□□□□□ -0.42
LMNB1-203ENST00000460265 IGHV1-8P0DP01 117 aa12.45□□□□□ -0.42
LMNB1-203ENST00000460265 PRR31Q5SQ13 230 aa12.45□□□□□ -0.42
LMNB1-203ENST00000460265 GTF2H5Q6ZYL4 71 aa12.45□□□□□ -0.42
LMNB1-203ENST00000460265 KIR3DL3Q8N743 410 aa12.45□□□□□ -0.42
LMNB1-203ENST00000460265 OR8B3Q8NGG8 313 aa12.45□□□□□ -0.42
LMNB1-203ENST00000460265 RITA1Q96K30 269 aa12.45□□□□□ -0.42
LMNB1-203ENST00000460265 OR8B2Q96RD0 313 aa12.45□□□□□ -0.42
LMNB1-203ENST00000460265 TMEM167BQ9NRX6 74 aa12.45□□□□□ -0.42
LMNB1-203ENST00000460265 OR4C46A6NHA9 309 aa12.44□□□□□ -0.42
LMNB1-203ENST00000460265 ZNF355PQ9NSJ1 428 aa12.44□□□□□ -0.42
LMNB1-203ENST00000460265 FAM90A9PA6NNJ1 464 aa12.44□□□□□ -0.42
LMNB1-203ENST00000460265 LOXP28300 417 aaPredicted RBP12.44□□□□□ -0.42
LMNB1-203ENST00000460265 CD69Q07108 199 aa12.44□□□□□ -0.42
LMNB1-203ENST00000460265 TEX36Q5VZQ5 186 aa12.44□□□□□ -0.42
LMNB1-203ENST00000460265 RAB1CQ92928 201 aa12.44□□□□□ -0.42
LMNB1-203ENST00000460265 SSBP3Q9BWW4 388 aaPredicted RBP12.44□□□□□ -0.42
LMNB1-203ENST00000460265 TMEM133Q9H2Q1 129 aa12.44□□□□□ -0.42
LMNB1-203ENST00000460265 TNFRSF19Q9NS68 423 aa12.44□□□□□ -0.42
LMNB1-203ENST00000460265 RNASE7Q9H1E1 156 aaKnown RBP12.43□□□□□ -0.42
LMNB1-203ENST00000460265 hDV102S1A0JD36 115 aa12.43□□□□□ -0.42
LMNB1-203ENST00000460265 FAM181BA6NEQ2 426 aa12.43□□□□□ -0.42
LMNB1-203ENST00000460265 SHISA9B4DS77 424 aa12.43□□□□□ -0.42
LMNB1-203ENST00000460265 BMPR1BO00238 502 aa12.43□□□□□ -0.42
LMNB1-203ENST00000460265 SLC25A5P05141 298 aaKnown RBP12.43□□□□□ -0.42
LMNB1-203ENST00000460265 C8orf88P0DMB2 117 aa12.43□□□□□ -0.42
LMNB1-203ENST00000460265 MC5RP33032 325 aa12.43□□□□□ -0.42
LMNB1-203ENST00000460265 CENPWQ5EE01 88 aa12.43□□□□□ -0.42
LMNB1-203ENST00000460265 EBLN2Q6P2I7 272 aa12.43□□□□□ -0.42
LMNB1-203ENST00000460265 LINC00479Q96M42 142 aa12.43□□□□□ -0.42
LMNB1-203ENST00000460265 K7EN84 100 aa12.43□□□□□ -0.42
LMNB1-203ENST00000460265 RNASE2P10153 161 aaKnown RBP12.43□□□□□ -0.42
LMNB1-203ENST00000460265 RPL24P83731 157 aaKnown RBP12.43□□□□□ -0.42
LMNB1-203ENST00000460265 SMAGPQ0VAQ4 97 aa12.43□□□□□ -0.42
LMNB1-203ENST00000460265 ZNF672Q499Z4 452 aaPredicted RBP12.43□□□□□ -0.42
LMNB1-203ENST00000460265 SLC25A33Q9BSK2 321 aa12.43□□□□□ -0.42
LMNB1-203ENST00000460265 PAXXQ9BUH6 204 aa12.43□□□□□ -0.42
LMNB1-203ENST00000460265 A0A087X0K7 114 aa12.42□□□□□ -0.42
LMNB1-203ENST00000460265 C7orf71A4D174 169 aa12.42□□□□□ -0.42
LMNB1-203ENST00000460265 HLA-DQA1P01909 254 aa12.42□□□□□ -0.42
LMNB1-203ENST00000460265 TMEM136Q6ZRR5 245 aa12.42□□□□□ -0.42
LMNB1-203ENST00000460265 UBTD1Q9HAC8 227 aa12.42□□□□□ -0.42
LMNB1-203ENST00000460265 CLEC5AQ9NY25 188 aa12.42□□□□□ -0.42
LMNB1-203ENST00000460265 TLN2Q9Y4G6 2542 aa12.42□□□□□ -0.42
LMNB1-203ENST00000460265 A0A1B0GV72 72 aa12.42□□□□□ -0.42
LMNB1-203ENST00000460265 CD5LO43866 347 aa12.42□□□□□ -0.42
LMNB1-203ENST00000460265 AREGP15514 252 aa12.42□□□□□ -0.42
LMNB1-203ENST00000460265 UQCRFS1P47985 274 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms