RNA–Protein interactions for RNA: ENST00000459954.1

UBQLN4-202, Transcript of ubiquilin 4, humanhuman

TSL 2

Gene UBQLN4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-202ENST00000459954 MFAP2P55001 183 aa4.92□□□□□ -1.62
UBQLN4-202ENST00000459954 HBBP68871 147 aa4.92□□□□□ -1.62
UBQLN4-202ENST00000459954 SLAQ13239 276 aa4.92□□□□□ -1.62
UBQLN4-202ENST00000459954 FXYD3Q14802 87 aa4.92□□□□□ -1.62
UBQLN4-202ENST00000459954 ADIPOQQ15848 244 aa4.92□□□□□ -1.62
UBQLN4-202ENST00000459954 TMEM155Q4W5P6 130 aa4.92□□□□□ -1.62
UBQLN4-202ENST00000459954 MRPL54Q6P161 138 aaKnown RBP4.92□□□□□ -1.62
UBQLN4-202ENST00000459954 DUX4L9Q6RFH8 374 aaPredicted RBP4.92□□□□□ -1.62
UBQLN4-202ENST00000459954 VHLLQ6RSH7 139 aa4.92□□□□□ -1.62
UBQLN4-202ENST00000459954 S100A7AQ86SG5 101 aa4.92□□□□□ -1.62
UBQLN4-202ENST00000459954 LYPD1Q8N2G4 141 aa4.92□□□□□ -1.62
UBQLN4-202ENST00000459954 DEFB108BQ8NET1 73 aa4.92□□□□□ -1.62
UBQLN4-202ENST00000459954 OR2T6Q8NHC8 308 aa4.92□□□□□ -1.62
UBQLN4-202ENST00000459954 C8orf46Q8TAG6 207 aa4.92□□□□□ -1.62
UBQLN4-202ENST00000459954 ORAOV1Q8WV07 137 aa4.92□□□□□ -1.62
UBQLN4-202ENST00000459954 RCHY1Q96PM5 261 aa4.92□□□□□ -1.62
UBQLN4-202ENST00000459954 NDFIP1Q9BT67 221 aa4.92□□□□□ -1.62
UBQLN4-202ENST00000459954 RPP21Q9H633 154 aaKnown RBP4.92□□□□□ -1.62
UBQLN4-202ENST00000459954 LPAR2Q9HBW0 351 aa4.92□□□□□ -1.62
UBQLN4-202ENST00000459954 TNFRSF19Q9NS68 423 aa4.92□□□□□ -1.62
UBQLN4-202ENST00000459954 GCN1Q92616 2671 aaKnown RBP4.92□□□□□ -1.62
UBQLN4-202ENST00000459954 ADGRG4Q8IZF6 3080 aa4.91□□□□□ -1.62
UBQLN4-202ENST00000459954 IGHV2-26A0A0B4J1V2 119 aa4.91□□□□□ -1.62
UBQLN4-202ENST00000459954 TRAV5A0A0B4J249 113 aa4.91□□□□□ -1.62
UBQLN4-202ENST00000459954 A0A1W2PPI3 338 aa4.91□□□□□ -1.62
UBQLN4-202ENST00000459954 IGLC7A0M8Q6 106 aa4.91□□□□□ -1.62
UBQLN4-202ENST00000459954 PGPA6NDG6 321 aa4.91□□□□□ -1.62
UBQLN4-202ENST00000459954 FAM181BA6NEQ2 426 aa4.91□□□□□ -1.62
UBQLN4-202ENST00000459954 C2orf70A6NJV1 201 aa4.91□□□□□ -1.62
UBQLN4-202ENST00000459954 HIGD1CA8MV81 97 aa4.91□□□□□ -1.62
UBQLN4-202ENST00000459954 E7EUB6 86 aa4.91□□□□□ -1.62
UBQLN4-202ENST00000459954 CCL21O00585 134 aa4.91□□□□□ -1.62
UBQLN4-202ENST00000459954 SLC25A5P05141 298 aaKnown RBP4.91□□□□□ -1.62
UBQLN4-202ENST00000459954 HOXB4P17483 251 aaPredicted RBP4.91□□□□□ -1.62
UBQLN4-202ENST00000459954 RPL27AP46776 148 aaKnown RBP4.91□□□□□ -1.62
UBQLN4-202ENST00000459954 HNRNPA3P51991 378 aaKnown RBP4.91□□□□□ -1.62
UBQLN4-202ENST00000459954 TNXAQ16473 311 aa4.91□□□□□ -1.62
UBQLN4-202ENST00000459954 MRGPRG-AS1Q2M3A8 158 aa4.91□□□□□ -1.62
UBQLN4-202ENST00000459954 KIAA1644Q3SXP7 199 aa4.91□□□□□ -1.62
UBQLN4-202ENST00000459954 FBXL19-AS1Q494R0 122 aa4.91□□□□□ -1.62
UBQLN4-202ENST00000459954 MORN5Q5VZ52 161 aa4.91□□□□□ -1.62
UBQLN4-202ENST00000459954 RBPMS2Q6ZRY4 209 aaKnown RBP4.91□□□□□ -1.62
UBQLN4-202ENST00000459954 LINC00305Q7Z4B0 112 aa4.91□□□□□ -1.62
UBQLN4-202ENST00000459954 OR2D3Q8NGH3 330 aa4.91□□□□□ -1.62
UBQLN4-202ENST00000459954 FAM168AQ92567 244 aa4.91□□□□□ -1.62
UBQLN4-202ENST00000459954 FAM103A1Q9BTL3 118 aaKnown RBP4.91□□□□□ -1.62
UBQLN4-202ENST00000459954 CLEC7AQ9BXN2 247 aa4.91□□□□□ -1.62
UBQLN4-202ENST00000459954 ST20Q9HBF5 79 aa4.91□□□□□ -1.62
UBQLN4-202ENST00000459954 NGBQ9NPG2 151 aa4.91□□□□□ -1.62
UBQLN4-202ENST00000459954 OTORQ9NRC9 128 aa4.91□□□□□ -1.62
UBQLN4-202ENST00000459954 LAMTOR2Q9Y2Q5 125 aa4.91□□□□□ -1.62
UBQLN4-202ENST00000459954 SPTAN1Q13813 2472 aaKnown RBP4.91□□□□□ -1.62
UBQLN4-202ENST00000459954 HIVEP3Q5T1R4 2406 aa4.91□□□□□ -1.62
UBQLN4-202ENST00000459954 USP9XQ93008 2570 aaPredicted RBP4.9□□□□□ -1.62
UBQLN4-202ENST00000459954 SPTBN1Q01082 2364 aaKnown RBP4.9□□□□□ -1.62
UBQLN4-202ENST00000459954 SERTM2A0A1B0GWG4 89 aa4.9□□□□□ -1.63
UBQLN4-202ENST00000459954 FBLL1A6NHQ2 334 aaKnown RBP4.9□□□□□ -1.63
UBQLN4-202ENST00000459954 HSBP1L1C9JCN9 74 aa4.9□□□□□ -1.63
UBQLN4-202ENST00000459954 M0R2Z0 102 aa4.9□□□□□ -1.63
UBQLN4-202ENST00000459954 FCN3O75636 299 aa4.9□□□□□ -1.63
UBQLN4-202ENST00000459954 MOSP00540 346 aa4.9□□□□□ -1.63
UBQLN4-202ENST00000459954 IGLV1-47P01700 117 aa4.9□□□□□ -1.63
UBQLN4-202ENST00000459954 P01737 135 aa4.9□□□□□ -1.63
UBQLN4-202ENST00000459954 TCRAP04437 139 aa4.9□□□□□ -1.63
UBQLN4-202ENST00000459954 IGHV1-8P0DP01 117 aa4.9□□□□□ -1.63
UBQLN4-202ENST00000459954 PYYP10082 97 aa4.9□□□□□ -1.63
UBQLN4-202ENST00000459954 GP9P14770 177 aa4.9□□□□□ -1.63
UBQLN4-202ENST00000459954 CCL3L1P16619 93 aa4.9□□□□□ -1.63
UBQLN4-202ENST00000459954 CD33P20138 364 aa4.9□□□□□ -1.63
UBQLN4-202ENST00000459954 GNLYP22749 145 aa4.9□□□□□ -1.63
UBQLN4-202ENST00000459954 LOXP28300 417 aaPredicted RBP4.9□□□□□ -1.63
UBQLN4-202ENST00000459954 TSPOP30536 169 aa4.9□□□□□ -1.63
UBQLN4-202ENST00000459954 TCL1AP56279 114 aa4.9□□□□□ -1.63
UBQLN4-202ENST00000459954 RPS20P60866 119 aaKnown RBP4.9□□□□□ -1.63
UBQLN4-202ENST00000459954 CCL8P80075 99 aa4.9□□□□□ -1.63
UBQLN4-202ENST00000459954 FAM27E3Q08E93 113 aa4.9□□□□□ -1.63
UBQLN4-202ENST00000459954 GDF5OSQ5U4N7 250 aa4.9□□□□□ -1.63
UBQLN4-202ENST00000459954 Q6AWC8 147 aa4.9□□□□□ -1.63
UBQLN4-202ENST00000459954 RNASE6Q93091 150 aaKnown RBP4.9□□□□□ -1.63
UBQLN4-202ENST00000459954 DAZAP1Q96EP5 407 aaKnown RBP4.9□□□□□ -1.63
UBQLN4-202ENST00000459954 TXN2Q99757 166 aa4.9□□□□□ -1.63
UBQLN4-202ENST00000459954 TMEM70Q9BUB7 260 aa4.9□□□□□ -1.63
UBQLN4-202ENST00000459954 TMEM133Q9H2Q1 129 aa4.9□□□□□ -1.63
UBQLN4-202ENST00000459954 MS4A6AQ9H2W1 248 aa4.9□□□□□ -1.63
UBQLN4-202ENST00000459954 RNF114Q9Y508 228 aa4.9□□□□□ -1.63
UBQLN4-202ENST00000459954 F11RQ9Y624 299 aaKnown RBP4.9□□□□□ -1.63
UBQLN4-202ENST00000459954 USP9YO00507 2555 aaPredicted RBP4.9□□□□□ -1.63
UBQLN4-202ENST00000459954 IGHV1-69-2A0A0G2JMI3 117 aa4.89□□□□□ -1.63
UBQLN4-202ENST00000459954 SLC25A17O43808 307 aa4.89□□□□□ -1.63
UBQLN4-202ENST00000459954 SPINK4O60575 86 aa4.89□□□□□ -1.63
UBQLN4-202ENST00000459954 HLA-DRB1P01911 266 aa4.89□□□□□ -1.63
UBQLN4-202ENST00000459954 LIPFP07098 398 aa4.89□□□□□ -1.63
UBQLN4-202ENST00000459954 NTF3P20783 257 aa4.89□□□□□ -1.63
UBQLN4-202ENST00000459954 PCP4P48539 62 aa4.89□□□□□ -1.63
UBQLN4-202ENST00000459954 SLC35B1P78383 322 aa4.89□□□□□ -1.63
UBQLN4-202ENST00000459954 SSBP2P81877 361 aaPredicted RBP4.89□□□□□ -1.63
UBQLN4-202ENST00000459954 PRR30Q53SZ7 412 aaPredicted RBP4.89□□□□□ -1.63
UBQLN4-202ENST00000459954 EBLN2Q6P2I7 272 aa4.89□□□□□ -1.63
UBQLN4-202ENST00000459954 PET117Q6UWS5 81 aa4.89□□□□□ -1.63
UBQLN4-202ENST00000459954 Q6ZN92 141 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms