RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 TMEM217Q8N7C4 229 aa8.16□□□□□ -1.1
USP39-210ENST00000459775 Q8N9W7 124 aa8.16□□□□□ -1.1
USP39-210ENST00000459775 TMEM167AQ8TBQ9 72 aa8.16□□□□□ -1.1
USP39-210ENST00000459775 HSPB9Q9BQS6 159 aa8.16□□□□□ -1.1
USP39-210ENST00000459775 SLC25A33Q9BSK2 321 aa8.16□□□□□ -1.1
USP39-210ENST00000459775 BET1LQ9NYM9 111 aa8.16□□□□□ -1.1
USP39-210ENST00000459775 CARHSP1Q9Y2V2 147 aaKnown RBP8.16□□□□□ -1.1
USP39-210ENST00000459775 IFITM10A6NMD0 228 aa8.15□□□□□ -1.1
USP39-210ENST00000459775 BLCAPP62952 87 aa8.15□□□□□ -1.1
USP39-210ENST00000459775 NDPQ00604 133 aa8.15□□□□□ -1.1
USP39-210ENST00000459775 STHQ8IWL8 128 aa8.15□□□□□ -1.1
USP39-210ENST00000459775 NPBQ8NG41 125 aa8.15□□□□□ -1.1
USP39-210ENST00000459775 RCHY1Q96PM5 261 aa8.15□□□□□ -1.1
USP39-210ENST00000459775 SPIN2AQ99865 258 aa8.15□□□□□ -1.1
USP39-210ENST00000459775 SPIN2BQ9BPZ2 258 aa8.15□□□□□ -1.1
USP39-210ENST00000459775 TMEM14BQ9NUH8 114 aa8.15□□□□□ -1.1
USP39-210ENST00000459775 CDC42EP3Q9UKI2 254 aa8.15□□□□□ -1.1
USP39-210ENST00000459775 TCF19Q9Y242 345 aa8.15□□□□□ -1.1
USP39-210ENST00000459775 A6NDX4 124 aa8.15□□□□□ -1.11
USP39-210ENST00000459775 CEBPZOSA8MTT3 80 aa8.15□□□□□ -1.11
USP39-210ENST00000459775 SLC25A6P12236 298 aa8.15□□□□□ -1.11
USP39-210ENST00000459775 AZU1P20160 251 aa8.15□□□□□ -1.11
USP39-210ENST00000459775 Q6YL49 198 aa8.15□□□□□ -1.11
USP39-210ENST00000459775 TEX45Q8NA69 505 aa8.15□□□□□ -1.11
USP39-210ENST00000459775 OR10D4PQ8NGN7 298 aa8.15□□□□□ -1.11
USP39-210ENST00000459775 DCUN1D4Q92564 292 aa8.15□□□□□ -1.11
USP39-210ENST00000459775 JMJD8Q96S16 334 aa8.15□□□□□ -1.11
USP39-210ENST00000459775 ARL6Q9H0F7 186 aa8.15□□□□□ -1.11
USP39-210ENST00000459775 SMCO4Q9NRQ5 59 aa8.15□□□□□ -1.11
USP39-210ENST00000459775 LINC00527Q9UJ94 153 aa8.15□□□□□ -1.11
USP39-210ENST00000459775 TET2Q6N021 2002 aaPredicted RBP8.14□□□□□ -1.11
USP39-210ENST00000459775 FAM24AA6NFZ4 105 aa8.14□□□□□ -1.11
USP39-210ENST00000459775 PHOX2AO14813 284 aa8.14□□□□□ -1.11
USP39-210ENST00000459775 SYNGR2O43760 224 aa8.14□□□□□ -1.11
USP39-210ENST00000459775 DEDDO75618 318 aa8.14□□□□□ -1.11
USP39-210ENST00000459775 NDUFA3O95167 84 aa8.14□□□□□ -1.11
USP39-210ENST00000459775 CXCL2P19875 107 aa8.14□□□□□ -1.11
USP39-210ENST00000459775 CX3CL1P78423 397 aa8.14□□□□□ -1.11
USP39-210ENST00000459775 CYCSP99999 105 aaKnown RBP8.14□□□□□ -1.11
USP39-210ENST00000459775 C9orf139Q6ZV77 190 aa8.14□□□□□ -1.11
USP39-210ENST00000459775 SLC35E3Q7Z769 313 aa8.14□□□□□ -1.11
USP39-210ENST00000459775 CBLN2Q8IUK8 224 aa8.14□□□□□ -1.11
USP39-210ENST00000459775 C11orf1Q9H5F2 150 aa8.14□□□□□ -1.11
USP39-210ENST00000459775 TUBA4BQ9H853 241 aa8.14□□□□□ -1.11
USP39-210ENST00000459775 KIAA1456Q9P272 454 aa8.14□□□□□ -1.11
USP39-210ENST00000459775 MALP21145 153 aa8.14□□□□□ -1.11
USP39-210ENST00000459775 DYNLT3P51808 116 aa8.14□□□□□ -1.11
USP39-210ENST00000459775 HSPE1P61604 102 aaKnown RBP8.14□□□□□ -1.11
USP39-210ENST00000459775 C5orf56Q8N8D9 126 aa8.14□□□□□ -1.11
USP39-210ENST00000459775 SLC35E1Q96K37 410 aa8.14□□□□□ -1.11
USP39-210ENST00000459775 COMMD5Q9GZQ3 224 aa8.14□□□□□ -1.11
USP39-210ENST00000459775 PPDPFQ9H3Y8 114 aa8.14□□□□□ -1.11
USP39-210ENST00000459775 ESM1Q9NQ30 184 aa8.14□□□□□ -1.11
USP39-210ENST00000459775 CST7O76096 145 aa8.13□□□□□ -1.11
USP39-210ENST00000459775 WT1-ASQ06250 92 aa8.13□□□□□ -1.11
USP39-210ENST00000459775 TMEM267Q0VDI3 215 aaPredicted RBP8.13□□□□□ -1.11
USP39-210ENST00000459775 FXYD3Q14802 87 aa8.13□□□□□ -1.11
USP39-210ENST00000459775 LGALSLQ3ZCW2 172 aaPredicted RBP8.13□□□□□ -1.11
USP39-210ENST00000459775 SPANXN5Q5MJ07 72 aa8.13□□□□□ -1.11
USP39-210ENST00000459775 PRSS54Q6PEW0 395 aa8.13□□□□□ -1.11
USP39-210ENST00000459775 ZNF429Q86V71 674 aa8.13□□□□□ -1.11
USP39-210ENST00000459775 VSTM2AQ8TAG5 236 aa8.13□□□□□ -1.11
USP39-210ENST00000459775 TMEM170AQ8WVE7 144 aa8.13□□□□□ -1.11
USP39-210ENST00000459775 RNF5Q99942 180 aa8.13□□□□□ -1.11
USP39-210ENST00000459775 PRNDQ9UKY0 176 aa8.13□□□□□ -1.11
USP39-210ENST00000459775 TNFSF18Q9UNG2 199 aa8.13□□□□□ -1.11
USP39-210ENST00000459775 IGHV7-81A0A0B4J1V7 117 aa8.12□□□□□ -1.11
USP39-210ENST00000459775 RNF222A6NCQ9 220 aa8.12□□□□□ -1.11
USP39-210ENST00000459775 K7EN84 100 aa8.12□□□□□ -1.11
USP39-210ENST00000459775 PRH1P02810 166 aa8.12□□□□□ -1.11
USP39-210ENST00000459775 VDAC2P45880 294 aaPredicted RBP8.12□□□□□ -1.11
USP39-210ENST00000459775 WFDC3Q8IUB2 231 aa8.12□□□□□ -1.11
USP39-210ENST00000459775 MMD2Q8IY49 270 aa8.12□□□□□ -1.11
USP39-210ENST00000459775 OR10G9Q8NGN4 311 aa8.12□□□□□ -1.11
USP39-210ENST00000459775 ABHD5Q8WTS1 349 aa8.12□□□□□ -1.11
USP39-210ENST00000459775 Q8WTZ3 238 aa8.12□□□□□ -1.11
USP39-210ENST00000459775 SRSF12Q8WXF0 261 aaKnown RBP8.12□□□□□ -1.11
USP39-210ENST00000459775 OR4C12Q96R67 309 aa8.12□□□□□ -1.11
USP39-210ENST00000459775 RASL11BQ9BPW5 248 aa8.12□□□□□ -1.11
USP39-210ENST00000459775 SMIM3Q9BZL3 60 aa8.12□□□□□ -1.11
USP39-210ENST00000459775 CTDSP1Q9GZU7 261 aa8.12□□□□□ -1.11
USP39-210ENST00000459775 NDUFA4L2Q9NRX3 87 aa8.12□□□□□ -1.11
USP39-210ENST00000459775 HSPB8Q9UJY1 196 aa8.12□□□□□ -1.11
USP39-210ENST00000459775 WSB1Q9Y6I7 421 aa8.12□□□□□ -1.11
USP39-210ENST00000459775 TYMSP04818 313 aa8.12□□□□□ -1.11
USP39-210ENST00000459775 EGR2P11161 476 aaPredicted RBP8.12□□□□□ -1.11
USP39-210ENST00000459775 SRD5A1P18405 259 aa8.12□□□□□ -1.11
USP39-210ENST00000459775 TCTAP57738 103 aa8.12□□□□□ -1.11
USP39-210ENST00000459775 EIF5AP63241 154 aaKnown RBP8.12□□□□□ -1.11
USP39-210ENST00000459775 PRCDQ00LT1 54 aa8.12□□□□□ -1.11
USP39-210ENST00000459775 ARL16Q0P5N6 197 aa8.12□□□□□ -1.11
USP39-210ENST00000459775 OR1L8Q8NGR8 309 aa8.12□□□□□ -1.11
USP39-210ENST00000459775 SSMEM1Q8WWF3 244 aa8.12□□□□□ -1.11
USP39-210ENST00000459775 C16orf92Q96LL3 132 aa8.12□□□□□ -1.11
USP39-210ENST00000459775 PSENENQ9NZ42 101 aa8.12□□□□□ -1.11
USP39-210ENST00000459775 MOB4Q9Y3A3 225 aa8.12□□□□□ -1.11
USP39-210ENST00000459775 G3V318 75 aa8.11□□□□□ -1.11
USP39-210ENST00000459775 GCGP01275 180 aa8.11□□□□□ -1.11
USP39-210ENST00000459775 IGHV3-48P01763 117 aa8.11□□□□□ -1.11
USP39-210ENST00000459775 HKR1P10072 659 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms