RNA–Protein interactions for RNA: ENST00000456506.2

LMCD1-206, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2

Gene LMCD1, Length 1,059 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-206ENST00000456506 Q8WTZ3 238 aa8.42□□□□□ -1.06
LMCD1-206ENST00000456506 GLYATL2Q8WU03 294 aa8.42□□□□□ -1.06
LMCD1-206ENST00000456506 SCGB3A2Q96PL1 93 aa8.42□□□□□ -1.06
LMCD1-206ENST00000456506 PDCD10Q9BUL8 212 aa8.42□□□□□ -1.06
LMCD1-206ENST00000456506 SAV1Q9H4B6 383 aaPredicted RBP8.42□□□□□ -1.06
LMCD1-206ENST00000456506 NUDT15Q9NV35 164 aa8.42□□□□□ -1.06
LMCD1-206ENST00000456506 MCUBQ9NWR8 336 aa8.42□□□□□ -1.06
LMCD1-206ENST00000456506 RPS10-NUDT3A0A1W2PQS6 291 aa8.41□□□□□ -1.06
LMCD1-206ENST00000456506 TMEM189A5PLL7 270 aa8.41□□□□□ -1.06
LMCD1-206ENST00000456506 SLC25A4P12235 298 aa8.41□□□□□ -1.06
LMCD1-206ENST00000456506 FXYD7P58549 80 aa8.41□□□□□ -1.06
LMCD1-206ENST00000456506 UBE2MP61081 183 aaKnown RBP8.41□□□□□ -1.06
LMCD1-206ENST00000456506 C1orf158Q8N1D5 194 aa8.41□□□□□ -1.06
LMCD1-206ENST00000456506 NIPSNAP3BQ9BS92 247 aa8.41□□□□□ -1.06
LMCD1-206ENST00000456506 TMEM222Q9H0R3 208 aa8.41□□□□□ -1.06
LMCD1-206ENST00000456506 C20orf85Q9H1P6 137 aa8.41□□□□□ -1.06
LMCD1-206ENST00000456506 RFNGQ9Y644 331 aa8.41□□□□□ -1.06
LMCD1-206ENST00000456506 HERC1Q15751 4861 aa8.41□□□□□ -1.06
LMCD1-206ENST00000456506 A8MTW9 85 aa8.4□□□□□ -1.06
LMCD1-206ENST00000456506 SCGB2A1O75556 95 aa8.4□□□□□ -1.06
LMCD1-206ENST00000456506 ATG12O94817 140 aa8.4□□□□□ -1.06
LMCD1-206ENST00000456506 IFNA21P01568 189 aa8.4□□□□□ -1.06
LMCD1-206ENST00000456506 PSG1P11464 419 aa8.4□□□□□ -1.06
LMCD1-206ENST00000456506 EMP1P54849 157 aa8.4□□□□□ -1.06
LMCD1-206ENST00000456506 GSG1LQ6UXU4 331 aa8.4□□□□□ -1.06
LMCD1-206ENST00000456506 FAM219AQ8IW50 185 aa8.4□□□□□ -1.06
LMCD1-206ENST00000456506 SELENOHQ8IZQ5 122 aaKnown RBP8.4□□□□□ -1.06
LMCD1-206ENST00000456506 SLC24A4Q8NFF2 622 aa8.4□□□□□ -1.06
LMCD1-206ENST00000456506 MARCH1Q8TCQ1 289 aa8.4□□□□□ -1.06
LMCD1-206ENST00000456506 NPIPB3Q92617 1050 aa8.4□□□□□ -1.06
LMCD1-206ENST00000456506 GPR146Q96CH1 333 aa8.4□□□□□ -1.06
LMCD1-206ENST00000456506 RRNAD1Q96FB5 475 aaKnown RBP8.4□□□□□ -1.06
LMCD1-206ENST00000456506 RTBDNQ9BSG5 229 aaPredicted RBP8.4□□□□□ -1.06
LMCD1-206ENST00000456506 SLC35B3Q9H1N7 401 aa8.4□□□□□ -1.06
LMCD1-206ENST00000456506 ENY2Q9NPA8 101 aa8.4□□□□□ -1.06
LMCD1-206ENST00000456506 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.4□□□□□ -1.06
LMCD1-206ENST00000456506 IGKV1D-37A0A075B6S9 117 aa8.39□□□□□ -1.07
LMCD1-206ENST00000456506 SNRPGP15A8MWD9 76 aa8.39□□□□□ -1.07
LMCD1-206ENST00000456506 B3GALNT1O75752 331 aa8.39□□□□□ -1.07
LMCD1-206ENST00000456506 CDK2AP2O75956 126 aa8.39□□□□□ -1.07
LMCD1-206ENST00000456506 IGKV3-20P01619 116 aa8.39□□□□□ -1.07
LMCD1-206ENST00000456506 OR5AC1P0C628 307 aa8.39□□□□□ -1.07
LMCD1-206ENST00000456506 BCAP31P51572 246 aa8.39□□□□□ -1.07
LMCD1-206ENST00000456506 PAX9P55771 341 aa8.39□□□□□ -1.07
LMCD1-206ENST00000456506 TNP2Q05952 138 aa8.39□□□□□ -1.07
LMCD1-206ENST00000456506 NMSQ5H8A3 153 aa8.39□□□□□ -1.07
LMCD1-206ENST00000456506 C1orf134Q5TEV5 83 aa8.39□□□□□ -1.07
LMCD1-206ENST00000456506 TMEM88Q6PEY1 159 aa8.39□□□□□ -1.07
LMCD1-206ENST00000456506 FOXI2Q6ZQN5 318 aa8.39□□□□□ -1.07
LMCD1-206ENST00000456506 UBE2DNLQ8IWF7 75 aa8.39□□□□□ -1.07
LMCD1-206ENST00000456506 OR51G1Q8NGK1 321 aa8.39□□□□□ -1.07
LMCD1-206ENST00000456506 ZFAND1Q8TCF1 268 aa8.39□□□□□ -1.07
LMCD1-206ENST00000456506 C17orf77Q96MU5 243 aa8.39□□□□□ -1.07
LMCD1-206ENST00000456506 HEYLQ9NQ87 328 aaPredicted RBP8.39□□□□□ -1.07
LMCD1-206ENST00000456506 CACNG5Q9UF02 275 aa8.39□□□□□ -1.07
LMCD1-206ENST00000456506 FLVCR2Q9UPI3 526 aa8.39□□□□□ -1.07
LMCD1-206ENST00000456506 TRAV6A0A075B6T7 132 aa8.38□□□□□ -1.07
LMCD1-206ENST00000456506 TEX13DA0A0J9YY54 714 aaPredicted RBP8.38□□□□□ -1.07
LMCD1-206ENST00000456506 RD3LP0DJH9 198 aa8.38□□□□□ -1.07
LMCD1-206ENST00000456506 PSMB3P49720 205 aa8.38□□□□□ -1.07
LMCD1-206ENST00000456506 SCGB2B2Q4G0G5 96 aa8.38□□□□□ -1.07
LMCD1-206ENST00000456506 TMEM128Q5BJH2 165 aa8.38□□□□□ -1.07
LMCD1-206ENST00000456506 AMTNQ6UX39 209 aa8.38□□□□□ -1.07
LMCD1-206ENST00000456506 CCDC71LQ8N9Z2 235 aa8.38□□□□□ -1.07
LMCD1-206ENST00000456506 RBPMSQ93062 196 aaKnown RBP8.38□□□□□ -1.07
LMCD1-206ENST00000456506 RNF125Q96EQ8 232 aa8.38□□□□□ -1.07
LMCD1-206ENST00000456506 NAA60Q9H7X0 242 aa8.38□□□□□ -1.07
LMCD1-206ENST00000456506 YTHDF2Q9Y5A9 579 aaKnown RBP8.38□□□□□ -1.07
LMCD1-206ENST00000456506 IGHV3OR16-12A0A075B7B8 117 aa8.37□□□□□ -1.07
LMCD1-206ENST00000456506 A0A0B4J2A0 478 aa8.37□□□□□ -1.07
LMCD1-206ENST00000456506 TEX48A0A1B0GUV7 120 aa8.37□□□□□ -1.07
LMCD1-206ENST00000456506 F6UB75 175 aa8.37□□□□□ -1.07
LMCD1-206ENST00000456506 SOHLH1Q5JUK2 328 aa8.37□□□□□ -1.07
LMCD1-206ENST00000456506 OR8G2PQ6IF36 304 aa8.37□□□□□ -1.07
LMCD1-206ENST00000456506 ACY3Q96HD9 319 aa8.37□□□□□ -1.07
LMCD1-206ENST00000456506 SHPKQ9UHJ6 478 aa8.37□□□□□ -1.07
LMCD1-206ENST00000456506 ALG5Q9Y673 324 aa8.37□□□□□ -1.07
LMCD1-206ENST00000456506 TMEM56-RWDD3S4R434 201 aa8.37□□□□□ -1.07
LMCD1-206ENST00000456506 A0A0J9YX75 114 aa8.36□□□□□ -1.07
LMCD1-206ENST00000456506 LOC102723971A0A1B0GUV8 181 aa8.36□□□□□ -1.07
LMCD1-206ENST00000456506 CRYM-AS1A6NIL9 109 aa8.36□□□□□ -1.07
LMCD1-206ENST00000456506 OR4E1P0C645 316 aa8.36□□□□□ -1.07
LMCD1-206ENST00000456506 ANXA7P20073 488 aaKnown RBP8.36□□□□□ -1.07
LMCD1-206ENST00000456506 FAM3BP58499 235 aaPredicted RBP8.36□□□□□ -1.07
LMCD1-206ENST00000456506 ZNF90Q03938 601 aa8.36□□□□□ -1.07
LMCD1-206ENST00000456506 ETFRF1Q6IPR1 90 aa8.36□□□□□ -1.07
LMCD1-206ENST00000456506 ZNRF2Q8NHG8 242 aa8.36□□□□□ -1.07
LMCD1-206ENST00000456506 RNASE11Q8TAA1 199 aaKnown RBP8.36□□□□□ -1.07
LMCD1-206ENST00000456506 C20orf173Q96LM9 149 aa8.36□□□□□ -1.07
LMCD1-206ENST00000456506 LINC00052Q96N35 136 aa8.36□□□□□ -1.07
LMCD1-206ENST00000456506 GPN1Q9HCN4 374 aaPredicted RBP8.36□□□□□ -1.07
LMCD1-206ENST00000456506 PLAC8L1A1L4L8 177 aa8.35□□□□□ -1.07
LMCD1-206ENST00000456506 CRXO43186 299 aaPredicted RBP8.35□□□□□ -1.07
LMCD1-206ENST00000456506 HTN3P15516 51 aa8.35□□□□□ -1.07
LMCD1-206ENST00000456506 SUPT4H1P63272 117 aaKnown RBP8.35□□□□□ -1.07
LMCD1-206ENST00000456506 PSG9Q00887 426 aa8.35□□□□□ -1.07
LMCD1-206ENST00000456506 C1orf194Q5T5A4 169 aa8.35□□□□□ -1.07
LMCD1-206ENST00000456506 FAM78BQ5VT40 261 aa8.35□□□□□ -1.07
LMCD1-206ENST00000456506 TMEM268Q5VZI3 342 aa8.35□□□□□ -1.07
LMCD1-206ENST00000456506 SPATA31B1PQ5VZV4 182 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms