RNA–Protein interactions for RNA: ENST00000455220.6

CCDC90B-202, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-202ENST00000455220 PFDN5Q99471 154 aa12.64□□□□□ -0.39
CCDC90B-202ENST00000455220 VSIRQ9H7M9 311 aa12.64□□□□□ -0.39
CCDC90B-202ENST00000455220 DNAJC4Q9NNZ3 241 aa12.64□□□□□ -0.39
CCDC90B-202ENST00000455220 PLA2G2EQ9NZK7 142 aa12.64□□□□□ -0.39
CCDC90B-202ENST00000455220 DOK5Q9P104 306 aa12.64□□□□□ -0.39
CCDC90B-202ENST00000455220 RABAC1Q9UI14 185 aa12.64□□□□□ -0.39
CCDC90B-202ENST00000455220 TMEM213A2RRL7 107 aa12.64□□□□□ -0.39
CCDC90B-202ENST00000455220 COX7A2P2O60397 106 aa12.64□□□□□ -0.39
CCDC90B-202ENST00000455220 MBP02144 154 aa12.64□□□□□ -0.39
CCDC90B-202ENST00000455220 CRYBB3P26998 211 aa12.64□□□□□ -0.39
CCDC90B-202ENST00000455220 ACOT6Q3I5F7 207 aaPredicted RBP12.64□□□□□ -0.39
CCDC90B-202ENST00000455220 LINC00482Q8N8I6 264 aa12.64□□□□□ -0.39
CCDC90B-202ENST00000455220 OR9G4Q8NGQ1 327 aa12.64□□□□□ -0.39
CCDC90B-202ENST00000455220 METTL26Q96S19 204 aa12.64□□□□□ -0.39
CCDC90B-202ENST00000455220 HIGD1AQ9Y241 93 aa12.64□□□□□ -0.39
CCDC90B-202ENST00000455220 U3KQE9 123 aa12.64□□□□□ -0.39
CCDC90B-202ENST00000455220 M0QZ24 198 aa12.63□□□□□ -0.39
CCDC90B-202ENST00000455220 OR5G3P0C626 314 aa12.63□□□□□ -0.39
CCDC90B-202ENST00000455220 RAB2AP61019 212 aa12.63□□□□□ -0.39
CCDC90B-202ENST00000455220 TM4SF20Q53R12 229 aa12.63□□□□□ -0.39
CCDC90B-202ENST00000455220 C10orf113Q5VZT2 155 aa12.63□□□□□ -0.39
CCDC90B-202ENST00000455220 PEMTQ9UBM1 199 aa12.63□□□□□ -0.39
CCDC90B-202ENST00000455220 UMAD1C9J7I0 102 aa12.62□□□□□ -0.39
CCDC90B-202ENST00000455220 OVOL1O14753 267 aa12.62□□□□□ -0.39
CCDC90B-202ENST00000455220 ZNF207O43670 478 aaKnown RBP12.62□□□□□ -0.39
CCDC90B-202ENST00000455220 C8orf88P0DMB2 117 aa12.62□□□□□ -0.39
CCDC90B-202ENST00000455220 NPPCP23582 126 aa12.62□□□□□ -0.39
CCDC90B-202ENST00000455220 TMEM41BQ5BJD5 291 aa12.62□□□□□ -0.39
CCDC90B-202ENST00000455220 AKR1C8PQ5T2L2 129 aa12.62□□□□□ -0.39
CCDC90B-202ENST00000455220 IL34Q6ZMJ4 242 aa12.62□□□□□ -0.39
CCDC90B-202ENST00000455220 UHRF2Q96PU4 802 aa12.62□□□□□ -0.39
CCDC90B-202ENST00000455220 SLC25A39Q9BZJ4 359 aaPredicted RBP12.62□□□□□ -0.39
CCDC90B-202ENST00000455220 RPRMQ9NS64 109 aa12.62□□□□□ -0.39
CCDC90B-202ENST00000455220 CMYA5Q8N3K9 4069 aa12.61□□□□□ -0.39
CCDC90B-202ENST00000455220 IGHV7-4-1A0A0J9YVY3 117 aa12.61□□□□□ -0.39
CCDC90B-202ENST00000455220 C2orf70A6NJV1 201 aa12.61□□□□□ -0.39
CCDC90B-202ENST00000455220 H3BRN7 92 aa12.61□□□□□ -0.39
CCDC90B-202ENST00000455220 TEX261Q6UWH6 196 aa12.61□□□□□ -0.39
CCDC90B-202ENST00000455220 LINC00305Q7Z4B0 112 aa12.61□□□□□ -0.39
CCDC90B-202ENST00000455220 S100A7AQ86SG5 101 aa12.61□□□□□ -0.39
CCDC90B-202ENST00000455220 RPP25LQ8N5L8 163 aaKnown RBP12.61□□□□□ -0.39
CCDC90B-202ENST00000455220 OR10G4Q8NGN3 311 aa12.61□□□□□ -0.39
CCDC90B-202ENST00000455220 OR10G9Q8NGN4 311 aa12.61□□□□□ -0.39
CCDC90B-202ENST00000455220 OR10G7Q8NGN6 311 aa12.61□□□□□ -0.39
CCDC90B-202ENST00000455220 MARC2Q969Z3 335 aa12.61□□□□□ -0.39
CCDC90B-202ENST00000455220 RNF2Q99496 336 aa12.61□□□□□ -0.39
CCDC90B-202ENST00000455220 SHANK2-AS3Q9BTD1 123 aa12.61□□□□□ -0.39
CCDC90B-202ENST00000455220 SEPSECSQ9HD40 501 aaKnown RBP12.61□□□□□ -0.39
CCDC90B-202ENST00000455220 SEC14L6B5MCN3 397 aa12.6□□□□□ -0.39
CCDC90B-202ENST00000455220 BUB3O43684 328 aa12.6□□□□□ -0.39
CCDC90B-202ENST00000455220 APOHP02749 345 aaPredicted RBP12.6□□□□□ -0.39
CCDC90B-202ENST00000455220 EDN2P20800 178 aa12.6□□□□□ -0.39
CCDC90B-202ENST00000455220 S100A7P31151 101 aa12.6□□□□□ -0.39
CCDC90B-202ENST00000455220 SULT1A2P50226 295 aa12.6□□□□□ -0.39
CCDC90B-202ENST00000455220 FAM78BQ5VT40 261 aa12.6□□□□□ -0.39
CCDC90B-202ENST00000455220 ALKAL2Q6UX46 152 aa12.6□□□□□ -0.39
CCDC90B-202ENST00000455220 MRPL32Q9BYC8 188 aaKnown RBP12.6□□□□□ -0.39
CCDC90B-202ENST00000455220 SMPXQ9UHP9 88 aa12.6□□□□□ -0.39
CCDC90B-202ENST00000455220 PFDN2Q9UHV9 154 aa12.6□□□□□ -0.39
CCDC90B-202ENST00000455220 FUT9Q9Y231 359 aa12.6□□□□□ -0.39
CCDC90B-202ENST00000455220 ZNF98A6NK75 572 aa12.6□□□□□ -0.39
CCDC90B-202ENST00000455220 CSN3P07498 182 aa12.6□□□□□ -0.39
CCDC90B-202ENST00000455220 CBLN1P23435 193 aa12.6□□□□□ -0.39
CCDC90B-202ENST00000455220 RAB5CP51148 216 aa12.6□□□□□ -0.39
CCDC90B-202ENST00000455220 RHOBP62745 196 aa12.6□□□□□ -0.39
CCDC90B-202ENST00000455220 MORN5Q5VZ52 161 aa12.6□□□□□ -0.39
CCDC90B-202ENST00000455220 ADAMTSL5Q6ZMM2 481 aa12.6□□□□□ -0.39
CCDC90B-202ENST00000455220 SIGLEC8Q9NYZ4 499 aa12.6□□□□□ -0.39
CCDC90B-202ENST00000455220 TECRQ9NZ01 308 aaKnown RBP12.6□□□□□ -0.39
CCDC90B-202ENST00000455220 FOLR2P14207 255 aa12.59□□□□□ -0.39
CCDC90B-202ENST00000455220 SPATA31B1PQ5VZV4 182 aa12.59□□□□□ -0.39
CCDC90B-202ENST00000455220 DPPA3Q6W0C5 159 aa12.59□□□□□ -0.39
CCDC90B-202ENST00000455220 ZNF680Q8NEM1 530 aa12.59□□□□□ -0.39
CCDC90B-202ENST00000455220 NARS2Q96I59 477 aaKnown RBP12.59□□□□□ -0.39
CCDC90B-202ENST00000455220 SCRT1Q9BWW7 348 aa12.59□□□□□ -0.39
CCDC90B-202ENST00000455220 FBN3Q75N90 2809 aa12.59□□□□□ -0.39
CCDC90B-202ENST00000455220 IGHV3-49A0A0A0MS15 119 aa12.58□□□□□ -0.4
CCDC90B-202ENST00000455220 A0A1W2PS18 150 aa12.58□□□□□ -0.4
CCDC90B-202ENST00000455220 CHEK1O14757 476 aa12.58□□□□□ -0.4
CCDC90B-202ENST00000455220 CDC34P49427 236 aaPredicted RBP12.58□□□□□ -0.4
CCDC90B-202ENST00000455220 ZNF726P1Q15940 193 aa12.58□□□□□ -0.4
CCDC90B-202ENST00000455220 FAM74A1Q5RGS3 127 aa12.58□□□□□ -0.4
CCDC90B-202ENST00000455220 C1orf194Q5T5A4 169 aa12.58□□□□□ -0.4
CCDC90B-202ENST00000455220 FAM122CQ6P4D5 195 aa12.58□□□□□ -0.4
CCDC90B-202ENST00000455220 MIR17HGQ75NE6 70 aa12.58□□□□□ -0.4
CCDC90B-202ENST00000455220 WFDC9Q8NEX5 89 aa12.58□□□□□ -0.4
CCDC90B-202ENST00000455220 ELOVL1Q9BW60 279 aa12.58□□□□□ -0.4
CCDC90B-202ENST00000455220 RHPN1-AS1Q9BWJ2 59 aa12.58□□□□□ -0.4
CCDC90B-202ENST00000455220 RNF24Q9Y225 148 aa12.58□□□□□ -0.4
CCDC90B-202ENST00000455220 A0A1W2PPV4 95 aa12.57□□□□□ -0.4
CCDC90B-202ENST00000455220 BMI1P35226 326 aa12.57□□□□□ -0.4
CCDC90B-202ENST00000455220 FHITP49789 147 aa12.57□□□□□ -0.4
CCDC90B-202ENST00000455220 C16orf54Q6UWD8 224 aa12.57□□□□□ -0.4
CCDC90B-202ENST00000455220 SPATA3Q8NHX4 192 aa12.57□□□□□ -0.4
CCDC90B-202ENST00000455220 FAM167A-AS1Q96KT0 104 aa12.57□□□□□ -0.4
CCDC90B-202ENST00000455220 ACTR3CQ9C0K3 210 aaPredicted RBP12.57□□□□□ -0.4
CCDC90B-202ENST00000455220 SLC25A22Q9H936 323 aa12.57□□□□□ -0.4
CCDC90B-202ENST00000455220 IGHV3OR16-13A0A075B7E8 117 aa12.56□□□□□ -0.4
CCDC90B-202ENST00000455220 IGHV3-74A0A0B4J1X5 117 aa12.56□□□□□ -0.4
CCDC90B-202ENST00000455220 CTXND1A0A1B0GTU2 59 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms