RNA–Protein interactions for RNA: ENST00000454018.6

SYNE1-214, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 1 (best)

Gene SYNE1, Length 1,546 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-214ENST00000454018 ZNF320A2RRD8 509 aa6.67□□□□□ -1.34
SYNE1-214ENST00000454018 TMEM213A2RRL7 107 aa6.67□□□□□ -1.34
SYNE1-214ENST00000454018 HMSDA8MTL9 139 aa6.67□□□□□ -1.34
SYNE1-214ENST00000454018 SMLR1H3BR10 107 aa6.67□□□□□ -1.34
SYNE1-214ENST00000454018 ARPC5O15511 151 aa6.67□□□□□ -1.34
SYNE1-214ENST00000454018 YIF1AO95070 293 aa6.67□□□□□ -1.34
SYNE1-214ENST00000454018 CFDP00746 253 aaPredicted RBP6.67□□□□□ -1.34
SYNE1-214ENST00000454018 IL4P05112 153 aa6.67□□□□□ -1.34
SYNE1-214ENST00000454018 RD3LP0DJH9 198 aa6.67□□□□□ -1.34
SYNE1-214ENST00000454018 PCP4P48539 62 aa6.67□□□□□ -1.34
SYNE1-214ENST00000454018 SELENOTP62341 195 aa6.67□□□□□ -1.34
SYNE1-214ENST00000454018 RAB31Q13636 194 aa6.67□□□□□ -1.34
SYNE1-214ENST00000454018 ZNF266Q14584 549 aa6.67□□□□□ -1.34
SYNE1-214ENST00000454018 TOMM20LQ6UXN7 152 aa6.67□□□□□ -1.34
SYNE1-214ENST00000454018 UNQ9165/PRO28630Q6UXU0 137 aa6.67□□□□□ -1.34
SYNE1-214ENST00000454018 OR51G1Q8NGK1 321 aa6.67□□□□□ -1.34
SYNE1-214ENST00000454018 Q8WTZ3 238 aa6.67□□□□□ -1.34
SYNE1-214ENST00000454018 MARC2Q969Z3 335 aa6.67□□□□□ -1.34
SYNE1-214ENST00000454018 ZNF414Q96IQ9 312 aa6.67□□□□□ -1.34
SYNE1-214ENST00000454018 WDR83OSQ9Y284 106 aa6.67□□□□□ -1.34
SYNE1-214ENST00000454018 C2orf70A6NJV1 201 aa6.66□□□□□ -1.34
SYNE1-214ENST00000454018 SEC14L6B5MCN3 397 aa6.66□□□□□ -1.34
SYNE1-214ENST00000454018 K7EMT4 169 aa6.66□□□□□ -1.34
SYNE1-214ENST00000454018 C1QBP02746 253 aa6.66□□□□□ -1.34
SYNE1-214ENST00000454018 PSG1P11464 419 aa6.66□□□□□ -1.34
SYNE1-214ENST00000454018 FGF7P21781 194 aa6.66□□□□□ -1.34
SYNE1-214ENST00000454018 BMI1P35226 326 aa6.66□□□□□ -1.34
SYNE1-214ENST00000454018 INSL3P51460 131 aa6.66□□□□□ -1.34
SYNE1-214ENST00000454018 ZNF90Q03938 601 aa6.66□□□□□ -1.34
SYNE1-214ENST00000454018 OR2F1Q13607 317 aa6.66□□□□□ -1.34
SYNE1-214ENST00000454018 C9orf66Q5T8R8 295 aa6.66□□□□□ -1.34
SYNE1-214ENST00000454018 CYP2G1PQ6ZSU1 146 aa6.66□□□□□ -1.34
SYNE1-214ENST00000454018 BPIFCQ8NFQ6 507 aa6.66□□□□□ -1.34
SYNE1-214ENST00000454018 MGST2Q99735 147 aa6.66□□□□□ -1.34
SYNE1-214ENST00000454018 C20orf24Q9BUV8 137 aa6.66□□□□□ -1.34
SYNE1-214ENST00000454018 PARD6GQ9BYG4 376 aaPredicted RBP6.66□□□□□ -1.34
SYNE1-214ENST00000454018 SMIM3Q9BZL3 60 aa6.66□□□□□ -1.34
SYNE1-214ENST00000454018 KCNIP2Q9NS61 270 aa6.66□□□□□ -1.34
SYNE1-214ENST00000454018 SIGLEC8Q9NYZ4 499 aa6.66□□□□□ -1.34
SYNE1-214ENST00000454018 FBXL17Q9UF56 701 aa6.66□□□□□ -1.34
SYNE1-214ENST00000454018 NOTCH1P46531 2555 aa6.66□□□□□ -1.34
SYNE1-214ENST00000454018 NBEAL1Q6ZS30 2694 aa6.66□□□□□ -1.34
SYNE1-214ENST00000454018 AGPAT2O15120 278 aa6.66□□□□□ -1.34
SYNE1-214ENST00000454018 SAP30O75446 220 aa6.66□□□□□ -1.34
SYNE1-214ENST00000454018 IFNA5P01569 189 aa6.66□□□□□ -1.34
SYNE1-214ENST00000454018 CAMLGP49069 296 aa6.66□□□□□ -1.34
SYNE1-214ENST00000454018 AP2S1P53680 142 aaPredicted RBP6.66□□□□□ -1.34
SYNE1-214ENST00000454018 BTNL8Q6UX41 500 aa6.66□□□□□ -1.34
SYNE1-214ENST00000454018 NARS2Q96I59 477 aaKnown RBP6.66□□□□□ -1.34
SYNE1-214ENST00000454018 METTL26Q96S19 204 aa6.66□□□□□ -1.34
SYNE1-214ENST00000454018 GGTLC1Q9BX51 225 aa6.66□□□□□ -1.34
SYNE1-214ENST00000454018 NPCDR1Q9BY65 106 aa6.66□□□□□ -1.34
SYNE1-214ENST00000454018 WDR61Q9GZS3 305 aaKnown RBP6.66□□□□□ -1.34
SYNE1-214ENST00000454018 MFFQ9GZY8 342 aa6.66□□□□□ -1.34
SYNE1-214ENST00000454018 MRPL27Q9P0M9 148 aaKnown RBP6.66□□□□□ -1.34
SYNE1-214ENST00000454018 IGHV3OR16-8A0A075B7F1 116 aa6.65□□□□□ -1.35
SYNE1-214ENST00000454018 IGHV7-4-1A0A0J9YVY3 117 aa6.65□□□□□ -1.35
SYNE1-214ENST00000454018 WI2-2373I1.2A0A1W2PRP0 233 aa6.65□□□□□ -1.35
SYNE1-214ENST00000454018 TAAR5O14804 337 aa6.65□□□□□ -1.35
SYNE1-214ENST00000454018 TRIAP1O43715 76 aa6.65□□□□□ -1.35
SYNE1-214ENST00000454018 CSN3P07498 182 aa6.65□□□□□ -1.35
SYNE1-214ENST00000454018 LINC00869P0C866 280 aa6.65□□□□□ -1.35
SYNE1-214ENST00000454018 C8orf88P0DMB2 117 aa6.65□□□□□ -1.35
SYNE1-214ENST00000454018 FOLR2P14207 255 aa6.65□□□□□ -1.35
SYNE1-214ENST00000454018 CBLN1P23435 193 aa6.65□□□□□ -1.35
SYNE1-214ENST00000454018 S100A7P31151 101 aa6.65□□□□□ -1.35
SYNE1-214ENST00000454018 LYZP61626 148 aa6.65□□□□□ -1.35
SYNE1-214ENST00000454018 OPCMLQ14982 345 aa6.65□□□□□ -1.35
SYNE1-214ENST00000454018 USF2Q15853 346 aaPredicted RBP6.65□□□□□ -1.35
SYNE1-214ENST00000454018 PXDC1Q5TGL8 231 aa6.65□□□□□ -1.35
SYNE1-214ENST00000454018 IL34Q6ZMJ4 242 aa6.65□□□□□ -1.35
SYNE1-214ENST00000454018 OR11H4Q8NGC9 324 aa6.65□□□□□ -1.35
SYNE1-214ENST00000454018 DYNLRB2Q8TF09 96 aa6.65□□□□□ -1.35
SYNE1-214ENST00000454018 HYLS1Q96M11 299 aa6.65□□□□□ -1.35
SYNE1-214ENST00000454018 PBDC1Q9BVG4 233 aa6.65□□□□□ -1.35
SYNE1-214ENST00000454018 TMEM231Q9H6L2 316 aa6.65□□□□□ -1.35
SYNE1-214ENST00000454018 RABAC1Q9UI14 185 aa6.65□□□□□ -1.35
SYNE1-214ENST00000454018 BORCS7-ASMTA0A0B4J1R7 106 aa6.64□□□□□ -1.35
SYNE1-214ENST00000454018 A0A0D9SG52 128 aa6.64□□□□□ -1.35
SYNE1-214ENST00000454018 A0A1W2PS18 150 aa6.64□□□□□ -1.35
SYNE1-214ENST00000454018 C17orf112F2Z3M2 114 aa6.64□□□□□ -1.35
SYNE1-214ENST00000454018 ZNF207O43670 478 aaKnown RBP6.64□□□□□ -1.35
SYNE1-214ENST00000454018 HNRNPCP07910 306 aaKnown RBP eCLIP6.64□□□□□ -1.35
SYNE1-214ENST00000454018 IGLL1P15814 213 aa6.64□□□□□ -1.35
SYNE1-214ENST00000454018 NPPCP23582 126 aa6.64□□□□□ -1.35
SYNE1-214ENST00000454018 CRYBB3P26998 211 aa6.64□□□□□ -1.35
SYNE1-214ENST00000454018 RPL29P47914 159 aaKnown RBP6.64□□□□□ -1.35
SYNE1-214ENST00000454018 EIF2B2P49770 351 aaKnown RBP6.64□□□□□ -1.35
SYNE1-214ENST00000454018 PLP1P60201 277 aa6.64□□□□□ -1.35
SYNE1-214ENST00000454018 ZFP69Q49AA0 526 aa6.64□□□□□ -1.35
SYNE1-214ENST00000454018 S100A7AQ86SG5 101 aa6.64□□□□□ -1.35
SYNE1-214ENST00000454018 KCNRGQ8N5I3 272 aa6.64□□□□□ -1.35
SYNE1-214ENST00000454018 ZNF709Q8N972 641 aa6.64□□□□□ -1.35
SYNE1-214ENST00000454018 SCGB1C1Q8TD33 95 aa6.64□□□□□ -1.35
SYNE1-214ENST00000454018 TECRQ9NZ01 308 aaKnown RBP6.64□□□□□ -1.35
SYNE1-214ENST00000454018 IGLV1-51P01701 117 aa6.63□□□□□ -1.35
SYNE1-214ENST00000454018 CD5P06127 495 aa6.63□□□□□ -1.35
SYNE1-214ENST00000454018 GATA2P23769 480 aaPredicted RBP6.63□□□□□ -1.35
SYNE1-214ENST00000454018 B2MP61769 119 aa6.63□□□□□ -1.35
SYNE1-214ENST00000454018 CD300CQ08708 224 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms