RNA–Protein interactions for RNA: ENST00000453705.1

BRCC3-208, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 2,694 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-208ENST00000453705 RBMY1EA6NEQ0 496 aaKnown RBP6.17□□□□□ -1.42
BRCC3-208ENST00000453705 ANGPTL7O43827 346 aa6.17□□□□□ -1.42
BRCC3-208ENST00000453705 RBMY1DP0C7P1 496 aaKnown RBP6.17□□□□□ -1.42
BRCC3-208ENST00000453705 RBMY1A1P0DJD3 496 aaKnown RBP6.17□□□□□ -1.42
BRCC3-208ENST00000453705 PGAM2P15259 253 aa6.17□□□□□ -1.42
BRCC3-208ENST00000453705 SNCAP37840 140 aa6.17□□□□□ -1.42
BRCC3-208ENST00000453705 SP6Q3SY56 376 aa6.17□□□□□ -1.42
BRCC3-208ENST00000453705 SLC35E4Q6ICL7 350 aa6.17□□□□□ -1.42
BRCC3-208ENST00000453705 NUP37Q8NFH4 326 aa6.17□□□□□ -1.42
BRCC3-208ENST00000453705 MRPL30Q8TCC3 161 aaKnown RBP6.17□□□□□ -1.42
BRCC3-208ENST00000453705 RNF7Q9UBF6 113 aa6.17□□□□□ -1.42
BRCC3-208ENST00000453705 AKAP13Q12802 2813 aa6.17□□□□□ -1.42
BRCC3-208ENST00000453705 GTF3C1Q12789 2109 aa6.17□□□□□ -1.42
BRCC3-208ENST00000453705 A0A087WZ39 114 aa6.17□□□□□ -1.42
BRCC3-208ENST00000453705 IGHV1-18A0A0C4DH31 117 aa6.17□□□□□ -1.42
BRCC3-208ENST00000453705 CCDC179H3BU77 68 aa6.17□□□□□ -1.42
BRCC3-208ENST00000453705 TRGC1P0CF51 173 aa6.17□□□□□ -1.42
BRCC3-208ENST00000453705 SLC25A6P12236 298 aa6.17□□□□□ -1.42
BRCC3-208ENST00000453705 G6PCP35575 357 aa6.17□□□□□ -1.42
BRCC3-208ENST00000453705 RPL29P47914 159 aaKnown RBP6.17□□□□□ -1.42
BRCC3-208ENST00000453705 THBS3P49746 956 aa6.17□□□□□ -1.42
BRCC3-208ENST00000453705 TNFAIP6P98066 277 aaPredicted RBP6.17□□□□□ -1.42
BRCC3-208ENST00000453705 PIGYQ3MUY2 71 aa6.17□□□□□ -1.42
BRCC3-208ENST00000453705 WDR86Q86TI4 376 aa6.17□□□□□ -1.42
BRCC3-208ENST00000453705 C5orf17Q8NAS9 161 aa6.17□□□□□ -1.42
BRCC3-208ENST00000453705 OR2G3Q8NGZ4 309 aa6.17□□□□□ -1.42
BRCC3-208ENST00000453705 SLC25A40Q8TBP6 338 aa6.17□□□□□ -1.42
BRCC3-208ENST00000453705 PHLDA1Q8WV24 401 aaPredicted RBP6.17□□□□□ -1.42
BRCC3-208ENST00000453705 C18orf12Q96KH6 178 aa6.17□□□□□ -1.42
BRCC3-208ENST00000453705 C2orf50Q96LR7 162 aa6.17□□□□□ -1.42
BRCC3-208ENST00000453705 TMEM147Q9BVK8 224 aa6.17□□□□□ -1.42
BRCC3-208ENST00000453705 NAA60Q9H7X0 242 aa6.17□□□□□ -1.42
BRCC3-208ENST00000453705 IGHV3-13P01766 116 aa6.16□□□□□ -1.42
BRCC3-208ENST00000453705 CECR9P0C854 216 aa6.16□□□□□ -1.42
BRCC3-208ENST00000453705 GPM6AP51674 278 aa6.16□□□□□ -1.42
BRCC3-208ENST00000453705 HLA-DRB3P79483 266 aa6.16□□□□□ -1.42
BRCC3-208ENST00000453705 ZNF154Q13106 437 aa6.16□□□□□ -1.42
BRCC3-208ENST00000453705 IQCJQ1A5X6 159 aa6.16□□□□□ -1.42
BRCC3-208ENST00000453705 ZNF718Q3SXZ3 478 aa6.16□□□□□ -1.42
BRCC3-208ENST00000453705 ZNF497Q6ZNH5 498 aa6.16□□□□□ -1.42
BRCC3-208ENST00000453705 C11orf53Q8IXP5 236 aa6.16□□□□□ -1.42
BRCC3-208ENST00000453705 ZNF491Q8N8L2 437 aa6.16□□□□□ -1.42
BRCC3-208ENST00000453705 KLF14Q8TD94 323 aaPredicted RBP6.16□□□□□ -1.42
BRCC3-208ENST00000453705 VN1R17PQ8TDU5 208 aa6.16□□□□□ -1.42
BRCC3-208ENST00000453705 FXYD5Q96DB9 178 aa6.16□□□□□ -1.42
BRCC3-208ENST00000453705 AQP10Q96PS8 301 aa6.16□□□□□ -1.42
BRCC3-208ENST00000453705 DERL1Q9BUN8 251 aa6.16□□□□□ -1.42
BRCC3-208ENST00000453705 SLC35B3Q9H1N7 401 aa6.16□□□□□ -1.42
BRCC3-208ENST00000453705 JPT2Q9H910 190 aa6.16□□□□□ -1.42
BRCC3-208ENST00000453705 A0A1B0GX51 115 aa6.16□□□□□ -1.42
BRCC3-208ENST00000453705 LYRM9A8MSI8 78 aa6.16□□□□□ -1.42
BRCC3-208ENST00000453705 UMAD1C9J7I0 102 aa6.16□□□□□ -1.42
BRCC3-208ENST00000453705 HBZP02008 142 aa6.16□□□□□ -1.42
BRCC3-208ENST00000453705 RHOGP84095 191 aa6.16□□□□□ -1.42
BRCC3-208ENST00000453705 Q6ZVQ6 151 aa6.16□□□□□ -1.42
BRCC3-208ENST00000453705 SLC35G3Q8N808 338 aa6.16□□□□□ -1.42
BRCC3-208ENST00000453705 RNF126Q9BV68 326 aa6.16□□□□□ -1.42
BRCC3-208ENST00000453705 OR2W1Q9Y3N9 320 aa6.16□□□□□ -1.42
BRCC3-208ENST00000453705 GAGE12HA6NDE8 117 aa6.15□□□□□ -1.42
BRCC3-208ENST00000453705 ATP5G1P05496 136 aa6.15□□□□□ -1.42
BRCC3-208ENST00000453705 CD55P08174 381 aa6.15□□□□□ -1.42
BRCC3-208ENST00000453705 CXCL1P09341 107 aa6.15□□□□□ -1.42
BRCC3-208ENST00000453705 ZNF728P0DKX0 622 aa6.15□□□□□ -1.42
BRCC3-208ENST00000453705 TMEM30BQ3MIR4 351 aa6.15□□□□□ -1.42
BRCC3-208ENST00000453705 FBXL19-AS1Q494R0 122 aa6.15□□□□□ -1.42
BRCC3-208ENST00000453705 SGPP2Q8IWX5 399 aa6.15□□□□□ -1.42
BRCC3-208ENST00000453705 FER1L6-AS1Q8NA97 138 aa6.15□□□□□ -1.42
BRCC3-208ENST00000453705 SUMF2Q8NBJ7 301 aa6.15□□□□□ -1.42
BRCC3-208ENST00000453705 Q8TCH9 128 aa6.15□□□□□ -1.42
BRCC3-208ENST00000453705 LIME1Q9H400 295 aa6.15□□□□□ -1.42
BRCC3-208ENST00000453705 PLEKHA3Q9HB20 300 aa6.15□□□□□ -1.42
BRCC3-208ENST00000453705 TAF9BQ9HBM6 251 aa6.15□□□□□ -1.42
BRCC3-208ENST00000453705 INTS1Q8N201 2190 aaKnown RBP6.15□□□□□ -1.42
BRCC3-208ENST00000453705 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.15□□□□□ -1.43
BRCC3-208ENST00000453705 KALRNO60229 2985 aa6.15□□□□□ -1.43
BRCC3-208ENST00000453705 TRGC2P03986 189 aa6.15□□□□□ -1.43
BRCC3-208ENST00000453705 RPS28P62857 69 aaKnown RBP6.15□□□□□ -1.43
BRCC3-208ENST00000453705 MEF2BQ02080 365 aaPredicted RBP6.15□□□□□ -1.43
BRCC3-208ENST00000453705 MIDNQ504T8 468 aa6.15□□□□□ -1.43
BRCC3-208ENST00000453705 ZNF506Q5JVG8 444 aa6.15□□□□□ -1.43
BRCC3-208ENST00000453705 FAM201AQ5SY85 155 aa6.15□□□□□ -1.43
BRCC3-208ENST00000453705 PCSK4Q6UW60 755 aa6.15□□□□□ -1.43
BRCC3-208ENST00000453705 FRZBQ92765 325 aa6.15□□□□□ -1.43
BRCC3-208ENST00000453705 PRADC1Q9BSG0 188 aa6.15□□□□□ -1.43
BRCC3-208ENST00000453705 C11orf1Q9H5F2 150 aa6.15□□□□□ -1.43
BRCC3-208ENST00000453705 COX11Q9Y6N1 276 aa6.15□□□□□ -1.43
BRCC3-208ENST00000453705 GAGE12BA1L429 117 aa6.14□□□□□ -1.43
BRCC3-208ENST00000453705 LYZL6O75951 148 aa6.14□□□□□ -1.43
BRCC3-208ENST00000453705 PPYP01298 95 aa6.14□□□□□ -1.43
BRCC3-208ENST00000453705 ZNF83P51522 516 aa6.14□□□□□ -1.43
BRCC3-208ENST00000453705 HSD52Q0P140 79 aa6.14□□□□□ -1.43
BRCC3-208ENST00000453705 IAH1Q2TAA2 248 aaPredicted RBP6.14□□□□□ -1.43
BRCC3-208ENST00000453705 Q5XG85 94 aa6.14□□□□□ -1.43
BRCC3-208ENST00000453705 GTF2H5Q6ZYL4 71 aa6.14□□□□□ -1.43
BRCC3-208ENST00000453705 RITA1Q96K30 269 aa6.14□□□□□ -1.43
BRCC3-208ENST00000453705 FAM19A4Q96LR4 140 aa6.14□□□□□ -1.43
BRCC3-208ENST00000453705 HDHD3Q9BSH5 251 aaPredicted RBP6.14□□□□□ -1.43
BRCC3-208ENST00000453705 SSBP3Q9BWW4 388 aaPredicted RBP6.14□□□□□ -1.43
BRCC3-208ENST00000453705 TMEM242Q9NWH2 141 aa6.14□□□□□ -1.43
BRCC3-208ENST00000453705 CYSLTR1Q9Y271 337 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms