RNA–Protein interactions for RNA: ENST00000449537.1

AC004540.1-204, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 727 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-204ENST00000449537 PRCDQ00LT1 54 aa8.91□□□□□ -0.98
AC004540.1-204ENST00000449537 VKORC1L1Q8N0U8 176 aa8.91□□□□□ -0.98
AC004540.1-204ENST00000449537 INO80EQ8NBZ0 244 aaPredicted RBP8.91□□□□□ -0.98
AC004540.1-204ENST00000449537 CSNK1G2-AS1Q8NCQ2 148 aa8.91□□□□□ -0.98
AC004540.1-204ENST00000449537 CIB3Q96Q77 187 aaPredicted RBP8.91□□□□□ -0.98
AC004540.1-204ENST00000449537 THYN1Q9P016 225 aa8.91□□□□□ -0.98
AC004540.1-204ENST00000449537 HSPB11Q9Y547 144 aa8.91□□□□□ -0.98
AC004540.1-204ENST00000449537 IGHV7-4-1A0A0J9YVY3 117 aa8.9□□□□□ -0.98
AC004540.1-204ENST00000449537 OR2T8A6NH00 312 aa8.9□□□□□ -0.98
AC004540.1-204ENST00000449537 KRTAP29-1A8MX34 341 aaPredicted RBP8.9□□□□□ -0.98
AC004540.1-204ENST00000449537 DNASE2O00115 360 aaPredicted RBP8.9□□□□□ -0.98
AC004540.1-204ENST00000449537 PITX3O75364 302 aa8.9□□□□□ -0.98
AC004540.1-204ENST00000449537 ADAP1O75689 374 aa8.9□□□□□ -0.98
AC004540.1-204ENST00000449537 REG1AP05451 166 aa8.9□□□□□ -0.98
AC004540.1-204ENST00000449537 HTN3P15516 51 aa8.9□□□□□ -0.98
AC004540.1-204ENST00000449537 BTF3P20290 206 aaKnown RBP8.9□□□□□ -0.98
AC004540.1-204ENST00000449537 PVALBP20472 110 aaPredicted RBP8.9□□□□□ -0.98
AC004540.1-204ENST00000449537 ATP5IP56385 69 aaPredicted RBP8.9□□□□□ -0.98
AC004540.1-204ENST00000449537 S100A10P60903 97 aa8.9□□□□□ -0.98
AC004540.1-204ENST00000449537 HSPE1P61604 102 aaKnown RBP8.9□□□□□ -0.98
AC004540.1-204ENST00000449537 LRRC37A5PQ49AS3 106 aa8.9□□□□□ -0.98
AC004540.1-204ENST00000449537 FAM90A2PQ658T7 463 aa8.9□□□□□ -0.98
AC004540.1-204ENST00000449537 TRPT1Q86TN4 253 aaKnown RBP8.9□□□□□ -0.98
AC004540.1-204ENST00000449537 OR1S1Q8NH92 325 aa8.9□□□□□ -0.98
AC004540.1-204ENST00000449537 ZNRF2Q8NHG8 242 aa8.9□□□□□ -0.98
AC004540.1-204ENST00000449537 PPP1R1CQ8WVI7 109 aa8.9□□□□□ -0.98
AC004540.1-204ENST00000449537 GPR146Q96CH1 333 aa8.9□□□□□ -0.98
AC004540.1-204ENST00000449537 ENY2Q9NPA8 101 aa8.9□□□□□ -0.98
AC004540.1-204ENST00000449537 PGPEP1Q9NXJ5 209 aa8.9□□□□□ -0.98
AC004540.1-204ENST00000449537 GSKIPQ9P0R6 139 aa8.9□□□□□ -0.98
AC004540.1-204ENST00000449537 HSPB7Q9UBY9 170 aa8.9□□□□□ -0.98
AC004540.1-204ENST00000449537 OR51B2Q9Y5P1 312 aa8.9□□□□□ -0.98
AC004540.1-204ENST00000449537 IGHV3-49A0A0A0MS15 119 aa8.89□□□□□ -0.99
AC004540.1-204ENST00000449537 A0A0D9SG52 128 aa8.89□□□□□ -0.99
AC004540.1-204ENST00000449537 A0A0G2JRQ6 117 aa8.89□□□□□ -0.99
AC004540.1-204ENST00000449537 WRBO00258 174 aa8.89□□□□□ -0.99
AC004540.1-204ENST00000449537 SLC25A4P12235 298 aa8.89□□□□□ -0.99
AC004540.1-204ENST00000449537 OR2B8PP59922 312 aa8.89□□□□□ -0.99
AC004540.1-204ENST00000449537 SPSB3Q6PJ21 355 aa8.89□□□□□ -0.99
AC004540.1-204ENST00000449537 Q6ZSN1 163 aa8.89□□□□□ -0.99
AC004540.1-204ENST00000449537 C9orf62Q8N4C0 152 aa8.89□□□□□ -0.99
AC004540.1-204ENST00000449537 ZBTB8BQ8NAP8 495 aaPredicted RBP8.89□□□□□ -0.99
AC004540.1-204ENST00000449537 ZNF114Q8NC26 417 aa8.89□□□□□ -0.99
AC004540.1-204ENST00000449537 OR4D5Q8NGN0 318 aa8.89□□□□□ -0.99
AC004540.1-204ENST00000449537 VN1R17PQ8TDU5 208 aa8.89□□□□□ -0.99
AC004540.1-204ENST00000449537 BSCL2Q96G97 398 aaPredicted RBP8.89□□□□□ -0.99
AC004540.1-204ENST00000449537 NDUFA4L2Q9NRX3 87 aa8.89□□□□□ -0.99
AC004540.1-204ENST00000449537 PRR13Q9NZ81 148 aa8.89□□□□□ -0.99
AC004540.1-204ENST00000449537 KANTRA0A1W2PQU2 76 aa8.88□□□□□ -0.99
AC004540.1-204ENST00000449537 ARPC5O15511 151 aa8.88□□□□□ -0.99
AC004540.1-204ENST00000449537 ST8SIA3O43173 380 aa8.88□□□□□ -0.99
AC004540.1-204ENST00000449537 MPC2O95563 127 aa8.88□□□□□ -0.99
AC004540.1-204ENST00000449537 SCGB1D2O95969 90 aa8.88□□□□□ -0.99
AC004540.1-204ENST00000449537 CD5P06127 495 aa8.88□□□□□ -0.99
AC004540.1-204ENST00000449537 NKX2-1P43699 371 aaPredicted RBP8.88□□□□□ -0.99
AC004540.1-204ENST00000449537 EMP1P54849 157 aa8.88□□□□□ -0.99
AC004540.1-204ENST00000449537 RPP30P78346 268 aaKnown RBP8.88□□□□□ -0.99
AC004540.1-204ENST00000449537 OR2F1Q13607 317 aa8.88□□□□□ -0.99
AC004540.1-204ENST00000449537 ZNF345Q14585 488 aa8.88□□□□□ -0.99
AC004540.1-204ENST00000449537 PRSS54Q6PEW0 395 aa8.88□□□□□ -0.99
AC004540.1-204ENST00000449537 TMEM88Q6PEY1 159 aa8.88□□□□□ -0.99
AC004540.1-204ENST00000449537 TCF24Q7RTU0 167 aa8.88□□□□□ -0.99
AC004540.1-204ENST00000449537 ZNF546Q86UE3 836 aa8.88□□□□□ -0.99
AC004540.1-204ENST00000449537 MBD2Q9UBB5 411 aa8.88□□□□□ -0.99
AC004540.1-204ENST00000449537 VPS13BQ7Z7G8 4022 aa8.88□□□□□ -0.99
AC004540.1-204ENST00000449537 CORTO00230 105 aa8.87□□□□□ -0.99
AC004540.1-204ENST00000449537 TSC22D2O75157 780 aa8.87□□□□□ -0.99
AC004540.1-204ENST00000449537 HOXA1P49639 335 aaPredicted RBP8.87□□□□□ -0.99
AC004540.1-204ENST00000449537 SUB1P53999 127 aaKnown RBP eCLIP8.87□□□□□ -0.99
AC004540.1-204ENST00000449537 TAS2R30P59541 319 aa8.87□□□□□ -0.99
AC004540.1-204ENST00000449537 VAMP2P63027 116 aa8.87□□□□□ -0.99
AC004540.1-204ENST00000449537 ERHP84090 104 aaKnown RBP8.87□□□□□ -0.99
AC004540.1-204ENST00000449537 ID3Q02535 119 aa8.87□□□□□ -0.99
AC004540.1-204ENST00000449537 C15orf53Q8NAA6 179 aa8.87□□□□□ -0.99
AC004540.1-204ENST00000449537 RAB40CQ96S21 281 aa8.87□□□□□ -0.99
AC004540.1-204ENST00000449537 NIPSNAP3BQ9BS92 247 aa8.87□□□□□ -0.99
AC004540.1-204ENST00000449537 MS4A6AQ9H2W1 248 aa8.87□□□□□ -0.99
AC004540.1-204ENST00000449537 PAIP2BQ9ULR5 123 aaKnown RBP8.87□□□□□ -0.99
AC004540.1-204ENST00000449537 HMCN2Q8NDA2 5059 aa8.87□□□□□ -0.99
AC004540.1-204ENST00000449537 IGHV3OR16-13A0A075B7E8 117 aa8.86□□□□□ -0.99
AC004540.1-204ENST00000449537 IGHV3-74A0A0B4J1X5 117 aa8.86□□□□□ -0.99
AC004540.1-204ENST00000449537 TRAV3A0A0B4J244 114 aa8.86□□□□□ -0.99
AC004540.1-204ENST00000449537 TEX50A0A1B0GTY4 177 aa8.86□□□□□ -0.99
AC004540.1-204ENST00000449537 IGLC7A0M8Q6 106 aa8.86□□□□□ -0.99
AC004540.1-204ENST00000449537 TMEM189A5PLL7 270 aa8.86□□□□□ -0.99
AC004540.1-204ENST00000449537 CEBPZOSA8MTT3 80 aa8.86□□□□□ -0.99
AC004540.1-204ENST00000449537 E5RGE8 158 aa8.86□□□□□ -0.99
AC004540.1-204ENST00000449537 SYNGR2O43760 224 aa8.86□□□□□ -0.99
AC004540.1-204ENST00000449537 S100A11P31949 105 aa8.86□□□□□ -0.99
AC004540.1-204ENST00000449537 HTR2BP41595 481 aa8.86□□□□□ -0.99
AC004540.1-204ENST00000449537 DLK1P80370 383 aa8.86□□□□□ -0.99
AC004540.1-204ENST00000449537 ACOT7LQ6ZUV0 252 aa8.86□□□□□ -0.99
AC004540.1-204ENST00000449537 DTD1Q8TEA8 209 aa8.86□□□□□ -0.99
AC004540.1-204ENST00000449537 OR10C1Q96KK4 312 aa8.86□□□□□ -0.99
AC004540.1-204ENST00000449537 ARL6Q9H0F7 186 aa8.86□□□□□ -0.99
AC004540.1-204ENST00000449537 NSG2Q9Y328 171 aa8.86□□□□□ -0.99
AC004540.1-204ENST00000449537 LSM5Q9Y4Y9 91 aaKnown RBP8.86□□□□□ -0.99
AC004540.1-204ENST00000449537 U3KQ87 197 aa8.86□□□□□ -0.99
AC004540.1-204ENST00000449537 TRAV14DV4A0A0A6YYC5 116 aa8.85□□□□□ -0.99
AC004540.1-204ENST00000449537 TRAV2A0A0B4J234 112 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms