RNA–Protein interactions for RNA: ENST00000448850.5

APP-210, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 1,846 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-210ENST00000448850 USF2Q15853 346 aaPredicted RBP11.16□□□□□ -0.62
APP-210ENST00000448850 FAM106AQ4KMX7 169 aa11.16□□□□□ -0.62
APP-210ENST00000448850 PATE2Q6UY27 113 aa11.16□□□□□ -0.62
APP-210ENST00000448850 OR10G4Q8NGN3 311 aa11.16□□□□□ -0.62
APP-210ENST00000448850 OR10G9Q8NGN4 311 aa11.16□□□□□ -0.62
APP-210ENST00000448850 OR10G7Q8NGN6 311 aa11.16□□□□□ -0.62
APP-210ENST00000448850 RAX2Q96IS3 184 aa11.16□□□□□ -0.62
APP-210ENST00000448850 DUX3Q96PT4 197 aa11.16□□□□□ -0.62
APP-210ENST00000448850 PFDN5Q99471 154 aa11.16□□□□□ -0.62
APP-210ENST00000448850 DNAJC4Q9NNZ3 241 aa11.16□□□□□ -0.62
APP-210ENST00000448850 IGHV3OR16-8A0A075B7F1 116 aa11.16□□□□□ -0.62
APP-210ENST00000448850 ELOA3CA0A087WX78 387 aaPredicted RBP11.16□□□□□ -0.62
APP-210ENST00000448850 UNQ9165/PRO28630Q6UXU0 137 aa11.16□□□□□ -0.62
APP-210ENST00000448850 GATAD1Q8WUU5 269 aa11.16□□□□□ -0.62
APP-210ENST00000448850 TMEM190Q8WZ59 177 aa11.16□□□□□ -0.62
APP-210ENST00000448850 MRPL27Q9P0M9 148 aaKnown RBP11.16□□□□□ -0.62
APP-210ENST00000448850 ZNF320A2RRD8 509 aa11.15□□□□□ -0.62
APP-210ENST00000448850 CCL24O00175 119 aa11.15□□□□□ -0.62
APP-210ENST00000448850 RAB5CP51148 216 aa11.15□□□□□ -0.62
APP-210ENST00000448850 SLURP1P55000 103 aa11.15□□□□□ -0.62
APP-210ENST00000448850 FHL3Q13643 280 aa11.15□□□□□ -0.62
APP-210ENST00000448850 C10orf113Q5VZT2 155 aa11.15□□□□□ -0.62
APP-210ENST00000448850 RPP25LQ8N5L8 163 aaKnown RBP11.15□□□□□ -0.62
APP-210ENST00000448850 C20orf24Q9BUV8 137 aa11.15□□□□□ -0.62
APP-210ENST00000448850 UBQLN2Q9UHD9 624 aa11.15□□□□□ -0.62
APP-210ENST00000448850 HIGD1AQ9Y241 93 aa11.15□□□□□ -0.62
APP-210ENST00000448850 KLF5Q13887 457 aaPredicted RBP11.14□□□□□ -0.63
APP-210ENST00000448850 FAM78BQ5VT40 261 aa11.14□□□□□ -0.63
APP-210ENST00000448850 FAM122CQ6P4D5 195 aa11.14□□□□□ -0.63
APP-210ENST00000448850 C12orf54Q6X4T0 127 aa11.14□□□□□ -0.63
APP-210ENST00000448850 ZNF767PQ75MW2 155 aa11.14□□□□□ -0.63
APP-210ENST00000448850 RNF141Q8WVD5 230 aa11.14□□□□□ -0.63
APP-210ENST00000448850 UHRF2Q96PU4 802 aa11.14□□□□□ -0.63
APP-210ENST00000448850 RNF2Q99496 336 aa11.14□□□□□ -0.63
APP-210ENST00000448850 ZNF747Q9BV97 191 aa11.14□□□□□ -0.63
APP-210ENST00000448850 RABAC1Q9UI14 185 aa11.14□□□□□ -0.63
APP-210ENST00000448850 A0A1W2PPV4 95 aa11.14□□□□□ -0.63
APP-210ENST00000448850 LGALS9O00182 355 aa11.14□□□□□ -0.63
APP-210ENST00000448850 FHITP49789 147 aa11.14□□□□□ -0.63
APP-210ENST00000448850 SYNJ2BPP57105 145 aa11.14□□□□□ -0.63
APP-210ENST00000448850 RHOBP62745 196 aa11.14□□□□□ -0.63
APP-210ENST00000448850 DPPA3Q6W0C5 159 aa11.14□□□□□ -0.63
APP-210ENST00000448850 LINC00305Q7Z4B0 112 aa11.14□□□□□ -0.63
APP-210ENST00000448850 REC114Q7Z4M0 266 aa11.14□□□□□ -0.63
APP-210ENST00000448850 C1QL4Q86Z23 238 aa11.14□□□□□ -0.63
APP-210ENST00000448850 SEPSECSQ9HD40 501 aaKnown RBP11.14□□□□□ -0.63
APP-210ENST00000448850 SEC14L6B5MCN3 397 aa11.13□□□□□ -0.63
APP-210ENST00000448850 ZNF207O43670 478 aaKnown RBP11.13□□□□□ -0.63
APP-210ENST00000448850 MYCNOSP40205 109 aa11.13□□□□□ -0.63
APP-210ENST00000448850 C3orf56Q8N813 242 aa11.13□□□□□ -0.63
APP-210ENST00000448850 FAM213BQ8TBF2 198 aa11.13□□□□□ -0.63
APP-210ENST00000448850 METTL26Q96S19 204 aa11.13□□□□□ -0.63
APP-210ENST00000448850 MRPL32Q9BYC8 188 aaKnown RBP11.13□□□□□ -0.63
APP-210ENST00000448850 ACTR3CQ9C0K3 210 aaPredicted RBP11.13□□□□□ -0.63
APP-210ENST00000448850 FUT9Q9Y231 359 aa11.13□□□□□ -0.63
APP-210ENST00000448850 K7EMT4 169 aa11.12□□□□□ -0.63
APP-210ENST00000448850 NPPCP23582 126 aa11.12□□□□□ -0.63
APP-210ENST00000448850 CDC34P49427 236 aaPredicted RBP11.12□□□□□ -0.63
APP-210ENST00000448850 SPATA31B1PQ5VZV4 182 aa11.12□□□□□ -0.63
APP-210ENST00000448850 S100A7AQ86SG5 101 aa11.12□□□□□ -0.63
APP-210ENST00000448850 SLC25A39Q9BZJ4 359 aaPredicted RBP11.12□□□□□ -0.63
APP-210ENST00000448850 SLC25A22Q9H936 323 aa11.12□□□□□ -0.63
APP-210ENST00000448850 DAZ1Q9NQZ3 744 aaKnown RBP11.12□□□□□ -0.63
APP-210ENST00000448850 PFDN2Q9UHV9 154 aa11.12□□□□□ -0.63
APP-210ENST00000448850 UFC1Q9Y3C8 167 aa11.12□□□□□ -0.63
APP-210ENST00000448850 CTXND1A0A1B0GTU2 59 aa11.12□□□□□ -0.63
APP-210ENST00000448850 ZNF705EA8MWA4 302 aaPredicted RBP11.12□□□□□ -0.63
APP-210ENST00000448850 A8MWP6 167 aa11.12□□□□□ -0.63
APP-210ENST00000448850 CRYBB3P26998 211 aa11.12□□□□□ -0.63
APP-210ENST00000448850 S100A7P31151 101 aa11.12□□□□□ -0.63
APP-210ENST00000448850 ZNF726P1Q15940 193 aa11.12□□□□□ -0.63
APP-210ENST00000448850 TM4SF20Q53R12 229 aa11.12□□□□□ -0.63
APP-210ENST00000448850 MORN5Q5VZ52 161 aa11.12□□□□□ -0.63
APP-210ENST00000448850 MIR17HGQ75NE6 70 aa11.12□□□□□ -0.63
APP-210ENST00000448850 LRRC20Q8TCA0 184 aa11.12□□□□□ -0.63
APP-210ENST00000448850 DLX4Q92988 240 aaPredicted RBP11.12□□□□□ -0.63
APP-210ENST00000448850 RAB24Q969Q5 203 aa11.12□□□□□ -0.63
APP-210ENST00000448850 SHANK2-AS3Q9BTD1 123 aa11.12□□□□□ -0.63
APP-210ENST00000448850 H3BRN7 92 aa11.11□□□□□ -0.63
APP-210ENST00000448850 RGS13O14921 159 aa11.11□□□□□ -0.63
APP-210ENST00000448850 SSX7Q7RTT5 188 aa11.11□□□□□ -0.63
APP-210ENST00000448850 U3KQE9 123 aa11.11□□□□□ -0.63
APP-210ENST00000448850 ZNF98A6NK75 572 aa11.1□□□□□ -0.63
APP-210ENST00000448850 EIF3GO75821 320 aaKnown RBP eCLIP11.1□□□□□ -0.63
APP-210ENST00000448850 BLOC1S1P78537 153 aa11.1□□□□□ -0.63
APP-210ENST00000448850 SHISA2Q6UWI4 295 aa11.1□□□□□ -0.63
APP-210ENST00000448850 OR4F17Q8NGA8 305 aa11.1□□□□□ -0.63
APP-210ENST00000448850 SAT2Q96F10 170 aaPredicted RBP11.1□□□□□ -0.63
APP-210ENST00000448850 OR4F4Q96R69 305 aa11.1□□□□□ -0.63
APP-210ENST00000448850 SCRT1Q9BWW7 348 aa11.1□□□□□ -0.63
APP-210ENST00000448850 PPP1R14DQ9NXH3 145 aa11.1□□□□□ -0.63
APP-210ENST00000448850 IGHV3-49A0A0A0MS15 119 aa11.09□□□□□ -0.63
APP-210ENST00000448850 TRAV5A0A0B4J249 113 aa11.09□□□□□ -0.63
APP-210ENST00000448850 IGHV7-4-1A0A0J9YVY3 117 aa11.09□□□□□ -0.63
APP-210ENST00000448850 TMEM213A2RRL7 107 aa11.09□□□□□ -0.63
APP-210ENST00000448850 HMGB3O15347 200 aaKnown RBP11.09□□□□□ -0.63
APP-210ENST00000448850 BUB3O43684 328 aa11.09□□□□□ -0.63
APP-210ENST00000448850 APOHP02749 345 aaPredicted RBP11.09□□□□□ -0.63
APP-210ENST00000448850 H2AFB1P0C5Y9 115 aa11.09□□□□□ -0.63
APP-210ENST00000448850 C8orf88P0DMB2 117 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms