RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 ZNF207O43670 478 aaKnown RBP10.3□□□□□ -0.76
PDLIM2-213ENST00000448520 DFFBO76075 338 aa10.3□□□□□ -0.76
PDLIM2-213ENST00000448520 CD7P09564 240 aa10.3□□□□□ -0.76
PDLIM2-213ENST00000448520 RBMY1DP0C7P1 496 aaKnown RBP10.3□□□□□ -0.76
PDLIM2-213ENST00000448520 GUCA2BQ16661 112 aa10.3□□□□□ -0.76
PDLIM2-213ENST00000448520 FAM106AQ4KMX7 169 aa10.3□□□□□ -0.76
PDLIM2-213ENST00000448520 SPSB3Q6PJ21 355 aa10.3□□□□□ -0.76
PDLIM2-213ENST00000448520 TEPPQ6URK8 271 aa10.3□□□□□ -0.76
PDLIM2-213ENST00000448520 CYP2G1PQ6ZSU1 146 aa10.3□□□□□ -0.76
PDLIM2-213ENST00000448520 DEFB125Q8N687 156 aa10.3□□□□□ -0.76
PDLIM2-213ENST00000448520 RSG1Q9BU20 258 aa10.3□□□□□ -0.76
PDLIM2-213ENST00000448520 GGTLC1Q9BX51 225 aa10.3□□□□□ -0.76
PDLIM2-213ENST00000448520 WDR61Q9GZS3 305 aaKnown RBP10.3□□□□□ -0.76
PDLIM2-213ENST00000448520 TRAV30A0A087WSZ9 112 aa10.29□□□□□ -0.76
PDLIM2-213ENST00000448520 A0A0D9SG52 128 aa10.29□□□□□ -0.76
PDLIM2-213ENST00000448520 BCL2L11O43521 198 aa10.29□□□□□ -0.76
PDLIM2-213ENST00000448520 TOMM40O96008 361 aa10.29□□□□□ -0.76
PDLIM2-213ENST00000448520 PSG1P11464 419 aa10.29□□□□□ -0.76
PDLIM2-213ENST00000448520 CBLN1P23435 193 aa10.29□□□□□ -0.76
PDLIM2-213ENST00000448520 MIC13Q5XKP0 118 aa10.29□□□□□ -0.76
PDLIM2-213ENST00000448520 TOMM20LQ6UXN7 152 aa10.29□□□□□ -0.76
PDLIM2-213ENST00000448520 ZNF600Q6ZNG1 722 aa10.29□□□□□ -0.76
PDLIM2-213ENST00000448520 HSD17B11Q8NBQ5 300 aa10.29□□□□□ -0.76
PDLIM2-213ENST00000448520 BPIFCQ8NFQ6 507 aa10.29□□□□□ -0.76
PDLIM2-213ENST00000448520 ATP6V0BQ99437 205 aa10.29□□□□□ -0.76
PDLIM2-213ENST00000448520 ARPC5LQ9BPX5 153 aa10.29□□□□□ -0.76
PDLIM2-213ENST00000448520 C20orf24Q9BUV8 137 aa10.29□□□□□ -0.76
PDLIM2-213ENST00000448520 SRD5A3Q9H8P0 318 aa10.29□□□□□ -0.76
PDLIM2-213ENST00000448520 ZFAND3Q9H8U3 227 aa10.29□□□□□ -0.76
PDLIM2-213ENST00000448520 SLC45A2Q9UMX9 530 aa10.29□□□□□ -0.76
PDLIM2-213ENST00000448520 PUS1Q9Y606 427 aaKnown RBP eCLIP10.29□□□□□ -0.76
PDLIM2-213ENST00000448520 SELENOKQ9Y6D0 94 aa10.29□□□□□ -0.76
PDLIM2-213ENST00000448520 ZNF320A2RRD8 509 aa10.28□□□□□ -0.76
PDLIM2-213ENST00000448520 YIF1AO95070 293 aa10.28□□□□□ -0.76
PDLIM2-213ENST00000448520 IFNA5P01569 189 aa10.28□□□□□ -0.76
PDLIM2-213ENST00000448520 RD3LP0DJH9 198 aa10.28□□□□□ -0.76
PDLIM2-213ENST00000448520 CAMLGP49069 296 aa10.28□□□□□ -0.76
PDLIM2-213ENST00000448520 YPEL3P61236 119 aaPredicted RBP10.28□□□□□ -0.76
PDLIM2-213ENST00000448520 OPCMLQ14982 345 aa10.28□□□□□ -0.76
PDLIM2-213ENST00000448520 OR51G1Q8NGK1 321 aa10.28□□□□□ -0.76
PDLIM2-213ENST00000448520 SCGB1C1Q8TD33 95 aa10.28□□□□□ -0.76
PDLIM2-213ENST00000448520 NPCDR1Q9BY65 106 aa10.28□□□□□ -0.76
PDLIM2-213ENST00000448520 SH3BGRL3Q9H299 93 aa10.28□□□□□ -0.76
PDLIM2-213ENST00000448520 RETNQ9HD89 108 aa10.28□□□□□ -0.76
PDLIM2-213ENST00000448520 DOK5Q9P104 306 aa10.28□□□□□ -0.76
PDLIM2-213ENST00000448520 IGHV3-49A0A0A0MS15 119 aa10.27□□□□□ -0.77
PDLIM2-213ENST00000448520 KANTRA0A1W2PQU2 76 aa10.27□□□□□ -0.77
PDLIM2-213ENST00000448520 HNRNPCP07910 306 aaKnown RBP eCLIP10.27□□□□□ -0.77
PDLIM2-213ENST00000448520 LINC00869P0C866 280 aa10.27□□□□□ -0.77
PDLIM2-213ENST00000448520 LYZP61626 148 aa10.27□□□□□ -0.77
PDLIM2-213ENST00000448520 RELQ04864 619 aaPredicted RBP10.27□□□□□ -0.77
PDLIM2-213ENST00000448520 USF2Q15853 346 aaPredicted RBP10.27□□□□□ -0.77
PDLIM2-213ENST00000448520 TM4SF20Q53R12 229 aa10.27□□□□□ -0.77
PDLIM2-213ENST00000448520 TMEM190Q8WZ59 177 aa10.27□□□□□ -0.77
PDLIM2-213ENST00000448520 FAM110AQ9BQ89 295 aa10.27□□□□□ -0.77
PDLIM2-213ENST00000448520 ZNF471Q9BX82 626 aaPredicted RBP10.27□□□□□ -0.77
PDLIM2-213ENST00000448520 IGHV3OR16-13A0A075B7E8 117 aa10.26□□□□□ -0.77
PDLIM2-213ENST00000448520 BORCS7-ASMTA0A0B4J1R7 106 aa10.26□□□□□ -0.77
PDLIM2-213ENST00000448520 IGHV3-74A0A0B4J1X5 117 aa10.26□□□□□ -0.77
PDLIM2-213ENST00000448520 NDUFA4O00483 81 aa10.26□□□□□ -0.77
PDLIM2-213ENST00000448520 IL4P05112 153 aa10.26□□□□□ -0.77
PDLIM2-213ENST00000448520 ATP6V0CP27449 155 aa10.26□□□□□ -0.77
PDLIM2-213ENST00000448520 PRR20EP86478 221 aa10.26□□□□□ -0.77
PDLIM2-213ENST00000448520 PRR20CP86479 221 aa10.26□□□□□ -0.77
PDLIM2-213ENST00000448520 PRR20DP86480 221 aa10.26□□□□□ -0.77
PDLIM2-213ENST00000448520 PRR20BP86481 221 aa10.26□□□□□ -0.77
PDLIM2-213ENST00000448520 PRR20AP86496 221 aa10.26□□□□□ -0.77
PDLIM2-213ENST00000448520 ZNF266Q14584 549 aa10.26□□□□□ -0.77
PDLIM2-213ENST00000448520 GCSAMLQ5JQS6 135 aa10.26□□□□□ -0.77
PDLIM2-213ENST00000448520 STPG3Q8N7X2 389 aa10.26□□□□□ -0.77
PDLIM2-213ENST00000448520 Q8WTZ3 238 aa10.26□□□□□ -0.77
PDLIM2-213ENST00000448520 PBDC1Q9BVG4 233 aa10.26□□□□□ -0.77
PDLIM2-213ENST00000448520 PXMP4Q9Y6I8 212 aa10.26□□□□□ -0.77
PDLIM2-213ENST00000448520 TRAV25A0A0B4J276 109 aa10.25□□□□□ -0.77
PDLIM2-213ENST00000448520 TMEM213A2RRL7 107 aa10.25□□□□□ -0.77
PDLIM2-213ENST00000448520 A8MWP6 167 aa10.25□□□□□ -0.77
PDLIM2-213ENST00000448520 TAAR5O14804 337 aa10.25□□□□□ -0.77
PDLIM2-213ENST00000448520 SCGB2A1O75556 95 aa10.25□□□□□ -0.77
PDLIM2-213ENST00000448520 APOHP02749 345 aaPredicted RBP10.25□□□□□ -0.77
PDLIM2-213ENST00000448520 ELLP55199 621 aaPredicted RBP10.25□□□□□ -0.77
PDLIM2-213ENST00000448520 MARC2Q969Z3 335 aa10.25□□□□□ -0.77
PDLIM2-213ENST00000448520 RNF125Q96EQ8 232 aa10.25□□□□□ -0.77
PDLIM2-213ENST00000448520 PARD6GQ9BYG4 376 aaPredicted RBP10.25□□□□□ -0.77
PDLIM2-213ENST00000448520 WFDC10AQ9H1F0 79 aa10.25□□□□□ -0.77
PDLIM2-213ENST00000448520 SLC39A9Q9NUM3 307 aa10.25□□□□□ -0.77
PDLIM2-213ENST00000448520 LOC102724200A0A096LPH7 203 aaPredicted RBP10.24□□□□□ -0.77
PDLIM2-213ENST00000448520 IGHV3-66A0A0C4DH42 116 aa10.24□□□□□ -0.77
PDLIM2-213ENST00000448520 MPDU1O75352 247 aa10.24□□□□□ -0.77
PDLIM2-213ENST00000448520 EIF3GO75821 320 aaKnown RBP eCLIP10.24□□□□□ -0.77
PDLIM2-213ENST00000448520 FABP1P07148 127 aa10.24□□□□□ -0.77
PDLIM2-213ENST00000448520 ORM2P19652 201 aa10.24□□□□□ -0.77
PDLIM2-213ENST00000448520 RPL29P47914 159 aaKnown RBP10.24□□□□□ -0.77
PDLIM2-213ENST00000448520 B2MP61769 119 aa10.24□□□□□ -0.77
PDLIM2-213ENST00000448520 RAB31Q13636 194 aa10.24□□□□□ -0.77
PDLIM2-213ENST00000448520 FFAR4Q5NUL3 377 aa10.24□□□□□ -0.77
PDLIM2-213ENST00000448520 PATE2Q6UY27 113 aa10.24□□□□□ -0.77
PDLIM2-213ENST00000448520 TMEM61Q8N0U2 210 aa10.24□□□□□ -0.77
PDLIM2-213ENST00000448520 ZNF709Q8N972 641 aa10.24□□□□□ -0.77
PDLIM2-213ENST00000448520 OR1B1Q8NGR6 318 aa10.24□□□□□ -0.77
PDLIM2-213ENST00000448520 GINS3Q9BRX5 216 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms