RNA–Protein interactions for RNA: ENST00000446690.2

COL6A4P1-201, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 2 BASIC

Gene COL6A4P1, Length 2,336 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-201ENST00000446690 POLR3KQ9Y2Y1 108 aaPredicted RBP7.51□□□□□ -1.21
COL6A4P1-201ENST00000446690 ARL2-SNX15V9GYD0 113 aa7.51□□□□□ -1.21
COL6A4P1-201ENST00000446690 CSMD2Q7Z408 3487 aa7.5□□□□□ -1.21
COL6A4P1-201ENST00000446690 IGHV1-69DA0A0B4J2H0 117 aa7.5□□□□□ -1.21
COL6A4P1-201ENST00000446690 K7EN84 100 aa7.5□□□□□ -1.21
COL6A4P1-201ENST00000446690 IGHV1-69P01742 117 aa7.5□□□□□ -1.21
COL6A4P1-201ENST00000446690 GZMBP10144 247 aa7.5□□□□□ -1.21
COL6A4P1-201ENST00000446690 EGR2P11161 476 aaPredicted RBP7.5□□□□□ -1.21
COL6A4P1-201ENST00000446690 COL8A1P27658 744 aa7.5□□□□□ -1.21
COL6A4P1-201ENST00000446690 OR5I1Q13606 314 aa7.5□□□□□ -1.21
COL6A4P1-201ENST00000446690 CENPWQ5EE01 88 aa7.5□□□□□ -1.21
COL6A4P1-201ENST00000446690 CYB5R2Q6BCY4 276 aa7.5□□□□□ -1.21
COL6A4P1-201ENST00000446690 STXBP6Q8NFX7 210 aa7.5□□□□□ -1.21
COL6A4P1-201ENST00000446690 LINC00479Q96M42 142 aa7.5□□□□□ -1.21
COL6A4P1-201ENST00000446690 SOX21Q9Y651 276 aaPredicted RBP7.5□□□□□ -1.21
COL6A4P1-201ENST00000446690 ZFHX3Q15911 3703 aa7.5□□□□□ -1.21
COL6A4P1-201ENST00000446690 IGLV11-55A0A075B6I3 123 aa7.5□□□□□ -1.21
COL6A4P1-201ENST00000446690 NDUFB8O95169 186 aa7.5□□□□□ -1.21
COL6A4P1-201ENST00000446690 NBEAP1P0C6P0 100 aa7.5□□□□□ -1.21
COL6A4P1-201ENST00000446690 MFAP4P55083 255 aa7.5□□□□□ -1.21
COL6A4P1-201ENST00000446690 UNQ5815/PRO19632Q6UWF5 114 aa7.5□□□□□ -1.21
COL6A4P1-201ENST00000446690 SLC25A39Q9BZJ4 359 aaPredicted RBP7.5□□□□□ -1.21
COL6A4P1-201ENST00000446690 THYN1Q9P016 225 aa7.5□□□□□ -1.21
COL6A4P1-201ENST00000446690 RPH3ALQ9UNE2 315 aa7.5□□□□□ -1.21
COL6A4P1-201ENST00000446690 FLNCQ14315 2725 aa7.49□□□□□ -1.21
COL6A4P1-201ENST00000446690 TRBV24-1A0A075B6N3 115 aa7.49□□□□□ -1.21
COL6A4P1-201ENST00000446690 LINC01548A6NM66 108 aa7.49□□□□□ -1.21
COL6A4P1-201ENST00000446690 IL4P05112 153 aa7.49□□□□□ -1.21
COL6A4P1-201ENST00000446690 MSMBP08118 114 aa7.49□□□□□ -1.21
COL6A4P1-201ENST00000446690 IGHV4-38-2P0DP08 117 aa7.49□□□□□ -1.21
COL6A4P1-201ENST00000446690 MGST1P10620 155 aaKnown RBP7.49□□□□□ -1.21
COL6A4P1-201ENST00000446690 ERVFC1-1P60608 527 aa7.49□□□□□ -1.21
COL6A4P1-201ENST00000446690 KCNIP4Q6PIL6 250 aa7.49□□□□□ -1.21
COL6A4P1-201ENST00000446690 ZNF329Q86UD4 541 aa7.49□□□□□ -1.21
COL6A4P1-201ENST00000446690 OR10G8Q8NGN5 311 aa7.49□□□□□ -1.21
COL6A4P1-201ENST00000446690 ATG101Q9BSB4 218 aa7.49□□□□□ -1.21
COL6A4P1-201ENST00000446690 PITPNC1Q9UKF7 332 aa7.49□□□□□ -1.21
COL6A4P1-201ENST00000446690 DOPEY1Q5JWR5 2465 aa7.49□□□□□ -1.21
COL6A4P1-201ENST00000446690 TRAV34A0A0B4J273 112 aa7.49□□□□□ -1.21
COL6A4P1-201ENST00000446690 PGPA6NDG6 321 aa7.49□□□□□ -1.21
COL6A4P1-201ENST00000446690 OR2T8A6NH00 312 aa7.49□□□□□ -1.21
COL6A4P1-201ENST00000446690 C9JCJ5 164 aa7.49□□□□□ -1.21
COL6A4P1-201ENST00000446690 PPP5D1E7EU14 171 aa7.49□□□□□ -1.21
COL6A4P1-201ENST00000446690 SLC17A3O00476 420 aa7.49□□□□□ -1.21
COL6A4P1-201ENST00000446690 ATP6V0E1O15342 81 aa7.49□□□□□ -1.21
COL6A4P1-201ENST00000446690 HLA-DRB1P01911 266 aa7.49□□□□□ -1.21
COL6A4P1-201ENST00000446690 AMBPP02760 352 aa7.49□□□□□ -1.21
COL6A4P1-201ENST00000446690 PLP1P60201 277 aa7.49□□□□□ -1.21
COL6A4P1-201ENST00000446690 GNG5P63218 68 aa7.49□□□□□ -1.21
COL6A4P1-201ENST00000446690 NHLRC2Q8NBF2 726 aa7.49□□□□□ -1.21
COL6A4P1-201ENST00000446690 SGMS2Q8NHU3 365 aa7.49□□□□□ -1.21
COL6A4P1-201ENST00000446690 SGK494Q96LW2 274 aa7.49□□□□□ -1.21
COL6A4P1-201ENST00000446690 HIF1ANQ9NWT6 349 aa7.49□□□□□ -1.21
COL6A4P1-201ENST00000446690 C21orf62Q9NYP8 219 aa7.49□□□□□ -1.21
COL6A4P1-201ENST00000446690 FBXL7Q9UJT9 491 aa7.49□□□□□ -1.21
COL6A4P1-201ENST00000446690 ZFYVE26Q68DK2 2539 aa7.48□□□□□ -1.21
COL6A4P1-201ENST00000446690 UTP20O75691 2785 aaKnown RBP7.48□□□□□ -1.21
COL6A4P1-201ENST00000446690 G3V318 75 aa7.48□□□□□ -1.21
COL6A4P1-201ENST00000446690 TGOLN2O43493 480 aa7.48□□□□□ -1.21
COL6A4P1-201ENST00000446690 SLC25A5P05141 298 aaKnown RBP7.48□□□□□ -1.21
COL6A4P1-201ENST00000446690 CD99P14209 185 aa7.48□□□□□ -1.21
COL6A4P1-201ENST00000446690 FCGR2BP31994 310 aaPredicted RBP7.48□□□□□ -1.21
COL6A4P1-201ENST00000446690 SRP14P37108 136 aaKnown RBP7.48□□□□□ -1.21
COL6A4P1-201ENST00000446690 TEX38Q6PEX7 206 aa7.48□□□□□ -1.21
COL6A4P1-201ENST00000446690 TMEM183AQ8IXX5 376 aa7.48□□□□□ -1.21
COL6A4P1-201ENST00000446690 MAPK1IP1LQ8NDC0 245 aa7.48□□□□□ -1.21
COL6A4P1-201ENST00000446690 USP9XQ93008 2570 aaPredicted RBP7.48□□□□□ -1.21
COL6A4P1-201ENST00000446690 ZNF462Q96JM2 2506 aa7.48□□□□□ -1.21
COL6A4P1-201ENST00000446690 TRAV30A0A087WSZ9 112 aa7.47□□□□□ -1.21
COL6A4P1-201ENST00000446690 ZNF320A2RRD8 509 aa7.47□□□□□ -1.21
COL6A4P1-201ENST00000446690 TOMM40O96008 361 aa7.47□□□□□ -1.21
COL6A4P1-201ENST00000446690 G0S2P27469 103 aa7.47□□□□□ -1.21
COL6A4P1-201ENST00000446690 LY6EQ16553 131 aa7.47□□□□□ -1.21
COL6A4P1-201ENST00000446690 ZNF491Q8N8L2 437 aa7.47□□□□□ -1.21
COL6A4P1-201ENST00000446690 RNF125Q96EQ8 232 aa7.47□□□□□ -1.21
COL6A4P1-201ENST00000446690 MS4A10Q96PG2 267 aa7.47□□□□□ -1.21
COL6A4P1-201ENST00000446690 RNASE7Q9H1E1 156 aaKnown RBP7.47□□□□□ -1.21
COL6A4P1-201ENST00000446690 MRPL27Q9P0M9 148 aaKnown RBP7.47□□□□□ -1.21
COL6A4P1-201ENST00000446690 CRYBG3Q68DQ2 2970 aa7.47□□□□□ -1.21
COL6A4P1-201ENST00000446690 IGHV3-35A0A0C4DH35 117 aa7.47□□□□□ -1.21
COL6A4P1-201ENST00000446690 B4DSR2 109 aa7.47□□□□□ -1.21
COL6A4P1-201ENST00000446690 PEX7O00628 323 aa7.47□□□□□ -1.21
COL6A4P1-201ENST00000446690 GP9P14770 177 aa7.47□□□□□ -1.21
COL6A4P1-201ENST00000446690 CNN1P51911 297 aaKnown RBP7.47□□□□□ -1.21
COL6A4P1-201ENST00000446690 DSCR9P59020 149 aa7.47□□□□□ -1.21
COL6A4P1-201ENST00000446690 BCL6BQ8N143 479 aaPredicted RBP7.47□□□□□ -1.21
COL6A4P1-201ENST00000446690 C5orf56Q8N8D9 126 aa7.47□□□□□ -1.21
COL6A4P1-201ENST00000446690 SNHG12Q9BXW3 62 aa7.47□□□□□ -1.21
COL6A4P1-201ENST00000446690 LINC00527Q9UJ94 153 aa7.47□□□□□ -1.21
COL6A4P1-201ENST00000446690 IGHV3OR16-8A0A075B7F1 116 aa7.46□□□□□ -1.21
COL6A4P1-201ENST00000446690 F8W735 103 aaPredicted RBP7.46□□□□□ -1.21
COL6A4P1-201ENST00000446690 PRB4P10163 310 aaPredicted RBP7.46□□□□□ -1.21
COL6A4P1-201ENST00000446690 C15orf32Q32M92 178 aa7.46□□□□□ -1.21
COL6A4P1-201ENST00000446690 PYGO2Q9BRQ0 406 aa7.46□□□□□ -1.21
COL6A4P1-201ENST00000446690 Q9H3A6 140 aa7.46□□□□□ -1.21
COL6A4P1-201ENST00000446690 SRD5A3Q9H8P0 318 aa7.46□□□□□ -1.21
COL6A4P1-201ENST00000446690 SERTAD4Q9NUC0 356 aa7.46□□□□□ -1.21
COL6A4P1-201ENST00000446690 EPDR1Q9UM22 224 aa7.46□□□□□ -1.21
COL6A4P1-201ENST00000446690 LY96Q9Y6Y9 160 aa7.46□□□□□ -1.21
COL6A4P1-201ENST00000446690 ABCA1O95477 2261 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms