RNA–Protein interactions for RNA: ENST00000445369.2

CLDN9-201, Transcript of claudin 9, humanhuman

APPRIS P1 BASIC

Gene CLDN9, Length 2,050 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9-201ENST00000445369 TSKUQ8WUA8 353 aa14.1□□□□□ -0.15
CLDN9-201ENST00000445369 ZNF331Q9NQX6 463 aaPredicted RBP14.1□□□□□ -0.15
CLDN9-201ENST00000445369 POLR3KQ9Y2Y1 108 aaPredicted RBP14.1□□□□□ -0.15
CLDN9-201ENST00000445369 CD24P25063 80 aa14.1□□□□□ -0.15
CLDN9-201ENST00000445369 FAM103A1Q9BTL3 118 aaKnown RBP14.1□□□□□ -0.15
CLDN9-201ENST00000445369 OTORQ9NRC9 128 aa14.1□□□□□ -0.15
CLDN9-201ENST00000445369 ZNF586Q9NXT0 402 aa14.1□□□□□ -0.15
CLDN9-201ENST00000445369 SRIP30626 198 aa14.09□□□□□ -0.15
CLDN9-201ENST00000445369 BRS3P32247 399 aa14.09□□□□□ -0.15
CLDN9-201ENST00000445369 GPR6P46095 362 aaPredicted RBP14.09□□□□□ -0.15
CLDN9-201ENST00000445369 C5orf64Q2M2E5 130 aa14.09□□□□□ -0.15
CLDN9-201ENST00000445369 NEU1Q99519 415 aa14.09□□□□□ -0.15
CLDN9-201ENST00000445369 HSPB9Q9BQS6 159 aa14.09□□□□□ -0.15
CLDN9-201ENST00000445369 ZZEF1O43149 2961 aa14.08□□□□□ -0.15
CLDN9-201ENST00000445369 APCSP02743 223 aa14.08□□□□□ -0.15
CLDN9-201ENST00000445369 SLAQ13239 276 aa14.08□□□□□ -0.15
CLDN9-201ENST00000445369 TMEM68Q96MH6 324 aa14.08□□□□□ -0.15
CLDN9-201ENST00000445369 NDUFAF3Q9BU61 184 aa14.08□□□□□ -0.15
CLDN9-201ENST00000445369 ABCA1O95477 2261 aa14.08□□□□□ -0.16
CLDN9-201ENST00000445369 A0A1W2PPR1 153 aa14.08□□□□□ -0.16
CLDN9-201ENST00000445369 A0A1W2PRD5 423 aa14.08□□□□□ -0.16
CLDN9-201ENST00000445369 A0A1W2PRF3 423 aa14.08□□□□□ -0.16
CLDN9-201ENST00000445369 A0A1W2PRM7 423 aa14.08□□□□□ -0.16
CLDN9-201ENST00000445369 LINC00322Q6ZN03 302 aaPredicted RBP14.08□□□□□ -0.16
CLDN9-201ENST00000445369 C1orf122Q6ZSJ8 110 aa14.08□□□□□ -0.16
CLDN9-201ENST00000445369 KIR3DL3Q8N743 410 aa14.08□□□□□ -0.16
CLDN9-201ENST00000445369 RBM14Q96PK6 669 aaKnown RBP14.08□□□□□ -0.16
CLDN9-201ENST00000445369 SAMD10Q9BYL1 202 aa14.08□□□□□ -0.16
CLDN9-201ENST00000445369 ZNF492Q9P255 531 aa14.08□□□□□ -0.16
CLDN9-201ENST00000445369 KIR2DL5BA0A0G2JN68 375 aa14.07□□□□□ -0.16
CLDN9-201ENST00000445369 KIR2DL5BA0A0G2JPC4 375 aa14.07□□□□□ -0.16
CLDN9-201ENST00000445369 HIGD1CA8MV81 97 aa14.07□□□□□ -0.16
CLDN9-201ENST00000445369 H3BRN7 92 aa14.07□□□□□ -0.16
CLDN9-201ENST00000445369 CD33P20138 364 aa14.07□□□□□ -0.16
CLDN9-201ENST00000445369 HES1Q14469 280 aa14.07□□□□□ -0.16
CLDN9-201ENST00000445369 GDF5OSQ5U4N7 250 aa14.07□□□□□ -0.16
CLDN9-201ENST00000445369 VMO1Q7Z5L0 202 aa14.07□□□□□ -0.16
CLDN9-201ENST00000445369 KIR2DL5AQ8N109 375 aa14.07□□□□□ -0.16
CLDN9-201ENST00000445369 KCNS1Q96KK3 526 aa14.07□□□□□ -0.16
CLDN9-201ENST00000445369 RCHY1Q96PM5 261 aa14.07□□□□□ -0.16
CLDN9-201ENST00000445369 SHANK2-AS3Q9BTD1 123 aa14.07□□□□□ -0.16
CLDN9-201ENST00000445369 PRSS22Q9GZN4 317 aa14.07□□□□□ -0.16
CLDN9-201ENST00000445369 DCHS2Q6V1P9 2916 aa14.07□□□□□ -0.16
CLDN9-201ENST00000445369 C19orf71A6NCJ1 209 aa14.06□□□□□ -0.16
CLDN9-201ENST00000445369 ZNF253O75346 499 aa14.06□□□□□ -0.16
CLDN9-201ENST00000445369 C1orf194Q5T5A4 169 aa14.06□□□□□ -0.16
CLDN9-201ENST00000445369 DYNAPQ8N1N2 210 aa14.06□□□□□ -0.16
CLDN9-201ENST00000445369 TBX15Q96SF7 602 aa14.06□□□□□ -0.16
CLDN9-201ENST00000445369 RPP21Q9H633 154 aaKnown RBP14.06□□□□□ -0.16
CLDN9-201ENST00000445369 VWC2LB2RUY7 222 aa14.06□□□□□ -0.16
CLDN9-201ENST00000445369 GPX1P07203 203 aa14.06□□□□□ -0.16
CLDN9-201ENST00000445369 HOXB4P17483 251 aaPredicted RBP14.06□□□□□ -0.16
CLDN9-201ENST00000445369 LY6DQ14210 128 aa14.06□□□□□ -0.16
CLDN9-201ENST00000445369 CT83Q5H943 113 aa14.06□□□□□ -0.16
CLDN9-201ENST00000445369 CCDC144NLQ6NUI1 221 aa14.06□□□□□ -0.16
CLDN9-201ENST00000445369 ATP5L2Q7Z4Y8 100 aa14.06□□□□□ -0.16
CLDN9-201ENST00000445369 Q86TA4 180 aa14.06□□□□□ -0.16
CLDN9-201ENST00000445369 ZNF491Q8N8L2 437 aa14.06□□□□□ -0.16
CLDN9-201ENST00000445369 HRNRQ86YZ3 2850 aaPredicted RBP14.06□□□□□ -0.16
CLDN9-201ENST00000445369 LRBAP50851 2863 aa14.05□□□□□ -0.16
CLDN9-201ENST00000445369 IGLV11-55A0A075B6I3 123 aa14.05□□□□□ -0.16
CLDN9-201ENST00000445369 A0A1B0GXF2 115 aa14.05□□□□□ -0.16
CLDN9-201ENST00000445369 NPIPB5A8MRT5 1133 aa14.05□□□□□ -0.16
CLDN9-201ENST00000445369 CDKN1AP38936 164 aa14.05□□□□□ -0.16
CLDN9-201ENST00000445369 KLF17Q5JT82 389 aaPredicted RBP14.05□□□□□ -0.16
CLDN9-201ENST00000445369 Q8N6K4 173 aa14.05□□□□□ -0.16
CLDN9-201ENST00000445369 A0A1W2PS18 150 aa14.05□□□□□ -0.16
CLDN9-201ENST00000445369 A6NNC1 897 aa14.05□□□□□ -0.16
CLDN9-201ENST00000445369 ZNF705FA8MVS1 300 aaPredicted RBP14.05□□□□□ -0.16
CLDN9-201ENST00000445369 OOSP1A8MZH6 123 aa14.05□□□□□ -0.16
CLDN9-201ENST00000445369 ZNF705DP0CH99 300 aaPredicted RBP14.05□□□□□ -0.16
CLDN9-201ENST00000445369 ZNF705BP0CI00 300 aaPredicted RBP14.05□□□□□ -0.16
CLDN9-201ENST00000445369 ZFP36P26651 326 aaKnown RBP14.05□□□□□ -0.16
CLDN9-201ENST00000445369 TOMM20LQ6UXN7 152 aa14.05□□□□□ -0.16
CLDN9-201ENST00000445369 ZNF562Q6V9R5 426 aa14.05□□□□□ -0.16
CLDN9-201ENST00000445369 EXOC3-AS1Q8N2X6 119 aa14.05□□□□□ -0.16
CLDN9-201ENST00000445369 SIGLECL1Q8N7X8 197 aa14.05□□□□□ -0.16
CLDN9-201ENST00000445369 TMEM190Q8WZ59 177 aa14.05□□□□□ -0.16
CLDN9-201ENST00000445369 RNF125Q96EQ8 232 aa14.05□□□□□ -0.16
CLDN9-201ENST00000445369 FANCD2OSQ96PS1 177 aa14.05□□□□□ -0.16
CLDN9-201ENST00000445369 IGLV2-11P01706 119 aa14.04□□□□□ -0.16
CLDN9-201ENST00000445369 IGLC2P0DOY2 106 aa14.04□□□□□ -0.16
CLDN9-201ENST00000445369 NDPQ00604 133 aa14.04□□□□□ -0.16
CLDN9-201ENST00000445369 MINOS1Q5TGZ0 78 aa14.04□□□□□ -0.16
CLDN9-201ENST00000445369 TEX43Q6ZNM6 134 aa14.04□□□□□ -0.16
CLDN9-201ENST00000445369 BPIFA4PQ86YQ2 179 aa14.04□□□□□ -0.16
CLDN9-201ENST00000445369 ARPC1AQ92747 370 aa14.04□□□□□ -0.16
CLDN9-201ENST00000445369 ZNF48Q96MX3 618 aaPredicted RBP14.04□□□□□ -0.16
CLDN9-201ENST00000445369 RNF114Q9Y508 228 aa14.04□□□□□ -0.16
CLDN9-201ENST00000445369 MINOS1-NBL1R4GNA1 71 aa14.04□□□□□ -0.16
CLDN9-201ENST00000445369 ATRXP46100 2492 aa14.04□□□□□ -0.16
CLDN9-201ENST00000445369 NBASA2RRP1 2371 aa14.04□□□□□ -0.16
CLDN9-201ENST00000445369 TRBV19A0A075B6N1 114 aa14.03□□□□□ -0.16
CLDN9-201ENST00000445369 WI2-2373I1.2A0A1W2PRP0 233 aa14.03□□□□□ -0.16
CLDN9-201ENST00000445369 OR2J3O76001 311 aa14.03□□□□□ -0.16
CLDN9-201ENST00000445369 EBI3Q14213 229 aa14.03□□□□□ -0.16
CLDN9-201ENST00000445369 C18orf32Q8TCD1 76 aa14.03□□□□□ -0.16
CLDN9-201ENST00000445369 PRORYQ9H606 182 aa14.03□□□□□ -0.16
CLDN9-201ENST00000445369 FBXL7Q9UJT9 491 aa14.03□□□□□ -0.16
CLDN9-201ENST00000445369 TBL2Q9Y4P3 447 aaKnown RBP14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 113 ms