RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 LEMD1Q68G75 181 aa11.37□□□□□ -0.59
SMARCA4-204ENST00000444061 PEF1Q9UBV8 284 aaKnown RBP11.36□□□□□ -0.59
SMARCA4-204ENST00000444061 WDR83OSQ9Y284 106 aa11.36□□□□□ -0.59
SMARCA4-204ENST00000444061 TRBV9A0A0B4J1U6 114 aa11.36□□□□□ -0.59
SMARCA4-204ENST00000444061 RNF222A6NCQ9 220 aa11.36□□□□□ -0.59
SMARCA4-204ENST00000444061 MGPP08493 103 aa11.36□□□□□ -0.59
SMARCA4-204ENST00000444061 OR11H6Q8NGC7 330 aa11.36□□□□□ -0.59
SMARCA4-204ENST00000444061 RNF166Q96A37 237 aaPredicted RBP11.36□□□□□ -0.59
SMARCA4-204ENST00000444061 SGK494Q96LW2 274 aa11.36□□□□□ -0.59
SMARCA4-204ENST00000444061 RNF126Q9BV68 326 aa11.36□□□□□ -0.59
SMARCA4-204ENST00000444061 TMEM250H0YL14 139 aa11.36□□□□□ -0.59
SMARCA4-204ENST00000444061 HLA-DQA1P01909 254 aa11.36□□□□□ -0.59
SMARCA4-204ENST00000444061 RPL24P83731 157 aaKnown RBP11.36□□□□□ -0.59
SMARCA4-204ENST00000444061 LOXL1Q08397 574 aaPredicted RBP11.36□□□□□ -0.59
SMARCA4-204ENST00000444061 MST1LQ2TV78 715 aa11.36□□□□□ -0.59
SMARCA4-204ENST00000444061 FAM120AOSQ5T036 256 aa11.36□□□□□ -0.59
SMARCA4-204ENST00000444061 BIVMQ86UB2 503 aa11.36□□□□□ -0.59
SMARCA4-204ENST00000444061 DIAPH2-AS1Q14236 149 aa11.35□□□□□ -0.59
SMARCA4-204ENST00000444061 FAM110DQ8TAY7 271 aaPredicted RBP11.35□□□□□ -0.59
SMARCA4-204ENST00000444061 SLC50A1Q9BRV3 221 aa11.35□□□□□ -0.59
SMARCA4-204ENST00000444061 A0A1W2PPI3 338 aa11.35□□□□□ -0.59
SMARCA4-204ENST00000444061 G3V318 75 aa11.35□□□□□ -0.59
SMARCA4-204ENST00000444061 SAPCD1Q5SSQ6 148 aa11.35□□□□□ -0.59
SMARCA4-204ENST00000444061 MIR17HGQ75NE6 70 aa11.35□□□□□ -0.59
SMARCA4-204ENST00000444061 SYT8Q8NBV8 401 aa11.35□□□□□ -0.59
SMARCA4-204ENST00000444061 STHQ8IWL8 128 aa11.35□□□□□ -0.59
SMARCA4-204ENST00000444061 C8orf31Q8N9H6 132 aa11.35□□□□□ -0.59
SMARCA4-204ENST00000444061 ANAPC10Q9UM13 185 aa11.35□□□□□ -0.59
SMARCA4-204ENST00000444061 NAV3Q8IVL0 2385 aa11.35□□□□□ -0.59
SMARCA4-204ENST00000444061 ZNF462Q96JM2 2506 aa11.35□□□□□ -0.59
SMARCA4-204ENST00000444061 CENPVL3A0A0U1RRI6 287 aa11.35□□□□□ -0.59
SMARCA4-204ENST00000444061 A8MWL6 223 aa11.35□□□□□ -0.59
SMARCA4-204ENST00000444061 H0YIZ8 118 aa11.35□□□□□ -0.59
SMARCA4-204ENST00000444061 SPATA45Q537H7 98 aa11.35□□□□□ -0.59
SMARCA4-204ENST00000444061 DGAT2L7PQ6IED9 249 aa11.35□□□□□ -0.59
SMARCA4-204ENST00000444061 FAM159AQ6UWV7 190 aa11.35□□□□□ -0.59
SMARCA4-204ENST00000444061 TMEM116Q8NCL8 245 aa11.35□□□□□ -0.59
SMARCA4-204ENST00000444061 FHITP49789 147 aa11.34□□□□□ -0.59
SMARCA4-204ENST00000444061 MFAP2P55001 183 aa11.34□□□□□ -0.59
SMARCA4-204ENST00000444061 TCF24Q7RTU0 167 aa11.34□□□□□ -0.59
SMARCA4-204ENST00000444061 ARFGEF3Q5TH69 2177 aa11.34□□□□□ -0.59
SMARCA4-204ENST00000444061 PAX1P15863 534 aa11.34□□□□□ -0.59
SMARCA4-204ENST00000444061 LURAP1LQ8IV03 231 aa11.34□□□□□ -0.59
SMARCA4-204ENST00000444061 FAM181BA6NEQ2 426 aa11.34□□□□□ -0.59
SMARCA4-204ENST00000444061 CD5P06127 495 aa11.34□□□□□ -0.59
SMARCA4-204ENST00000444061 PSG1P11464 419 aa11.34□□□□□ -0.59
SMARCA4-204ENST00000444061 ZFP36P26651 326 aaKnown RBP11.33□□□□□ -0.6
SMARCA4-204ENST00000444061 CMC4P56277 68 aaPredicted RBP11.33□□□□□ -0.6
SMARCA4-204ENST00000444061 RARRES2Q99969 163 aa11.33□□□□□ -0.6
SMARCA4-204ENST00000444061 PARD6GQ9BYG4 376 aaPredicted RBP11.33□□□□□ -0.6
SMARCA4-204ENST00000444061 ABCA2Q9BZC7 2435 aa11.33□□□□□ -0.6
SMARCA4-204ENST00000444061 HTTP42858 3142 aa11.33□□□□□ -0.6
SMARCA4-204ENST00000444061 A0A0G2JRQ6 117 aa11.33□□□□□ -0.6
SMARCA4-204ENST00000444061 IFITM10A6NMD0 228 aa11.33□□□□□ -0.6
SMARCA4-204ENST00000444061 MRPL54Q6P161 138 aaKnown RBP11.33□□□□□ -0.6
SMARCA4-204ENST00000444061 WFDC11Q8NEX6 87 aa11.33□□□□□ -0.6
SMARCA4-204ENST00000444061 RNASE2P10153 161 aaKnown RBP11.32□□□□□ -0.6
SMARCA4-204ENST00000444061 TREML4Q6UXN2 200 aa11.32□□□□□ -0.6
SMARCA4-204ENST00000444061 PHLDA3Q9Y5J5 127 aa11.32□□□□□ -0.6
SMARCA4-204ENST00000444061 PKD1L2Q7Z442 2459 aa11.32□□□□□ -0.6
SMARCA4-204ENST00000444061 PRSS57Q6UWY2 283 aa11.32□□□□□ -0.6
SMARCA4-204ENST00000444061 Q6ZRM9 215 aa11.32□□□□□ -0.6
SMARCA4-204ENST00000444061 DUSP14O95147 198 aaKnown RBP11.32□□□□□ -0.6
SMARCA4-204ENST00000444061 MDKP21741 143 aaPredicted RBP11.32□□□□□ -0.6
SMARCA4-204ENST00000444061 NDUFAF3Q9BU61 184 aa11.32□□□□□ -0.6
SMARCA4-204ENST00000444061 SYNJ2BPP57105 145 aa11.32□□□□□ -0.6
SMARCA4-204ENST00000444061 SIGLEC15Q6ZMC9 328 aa11.32□□□□□ -0.6
SMARCA4-204ENST00000444061 TRGV9Q99603 122 aa11.32□□□□□ -0.6
SMARCA4-204ENST00000444061 OVOL3O00110 214 aa11.31□□□□□ -0.6
SMARCA4-204ENST00000444061 CDSNQ15517 529 aa11.31□□□□□ -0.6
SMARCA4-204ENST00000444061 PRDM13Q9H4Q3 707 aa11.31□□□□□ -0.6
SMARCA4-204ENST00000444061 SCGB1C2P0DMR2 95 aa11.31□□□□□ -0.6
SMARCA4-204ENST00000444061 RPS20P60866 119 aaKnown RBP11.31□□□□□ -0.6
SMARCA4-204ENST00000444061 IBA57Q5T440 356 aaKnown RBP11.31□□□□□ -0.6
SMARCA4-204ENST00000444061 TMEM14EPQ6UXP3 125 aa11.31□□□□□ -0.6
SMARCA4-204ENST00000444061 OR1N2Q8NGR9 330 aa11.31□□□□□ -0.6
SMARCA4-204ENST00000444061 ZFP30Q9Y2G7 519 aa11.31□□□□□ -0.6
SMARCA4-204ENST00000444061 GAGE10A6NGK3 116 aa11.3□□□□□ -0.6
SMARCA4-204ENST00000444061 LMO4P61968 165 aa11.3□□□□□ -0.6
SMARCA4-204ENST00000444061 DEFB121Q5J5C9 76 aa11.3□□□□□ -0.6
SMARCA4-204ENST00000444061 BBC3Q96PG8 261 aaPredicted RBP11.3□□□□□ -0.6
SMARCA4-204ENST00000444061 MRPL18Q9H0U6 180 aaKnown RBP11.3□□□□□ -0.6
SMARCA4-204ENST00000444061 Q9H3A6 140 aa11.3□□□□□ -0.6
SMARCA4-204ENST00000444061 SELENOKQ9Y6D0 94 aa11.3□□□□□ -0.6
SMARCA4-204ENST00000444061 ELANEP08246 267 aa11.3□□□□□ -0.6
SMARCA4-204ENST00000444061 SRP19P09132 144 aaKnown RBP11.3□□□□□ -0.6
SMARCA4-204ENST00000444061 TMEM14BQ9NUH8 114 aa11.3□□□□□ -0.6
SMARCA4-204ENST00000444061 C5orf52A6NGY3 159 aa11.3□□□□□ -0.6
SMARCA4-204ENST00000444061 DUX3Q96PT4 197 aa11.3□□□□□ -0.6
SMARCA4-204ENST00000444061 LINC01587Q99440 93 aa11.3□□□□□ -0.6
SMARCA4-204ENST00000444061 LRRK2Q5S007 2527 aa11.29□□□□□ -0.6
SMARCA4-204ENST00000444061 PSMG4Q5JS54 123 aa11.29□□□□□ -0.6
SMARCA4-204ENST00000444061 GGTLC1Q9BX51 225 aa11.29□□□□□ -0.6
SMARCA4-204ENST00000444061 DAZ1Q9NQZ3 744 aaKnown RBP11.29□□□□□ -0.6
SMARCA4-204ENST00000444061 NDUFB8O95169 186 aa11.29□□□□□ -0.6
SMARCA4-204ENST00000444061 RPL15P61313 204 aaKnown RBP11.29□□□□□ -0.6
SMARCA4-204ENST00000444061 C1QL4Q86Z23 238 aa11.29□□□□□ -0.6
SMARCA4-204ENST00000444061 PMCHL2Q9BQD1 86 aa11.29□□□□□ -0.6
SMARCA4-204ENST00000444061 NDUFA4L2Q9NRX3 87 aa11.29□□□□□ -0.6
SMARCA4-204ENST00000444061 PRRC2AP48634 2157 aaKnown RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms