RNA–Protein interactions for RNA: ENST00000443561.3

PDLIM2-212, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-212ENST00000443561 AGPAT2O15120 278 aa9.5□□□□□ -0.89
PDLIM2-212ENST00000443561 SCGB2A1O75556 95 aa9.5□□□□□ -0.89
PDLIM2-212ENST00000443561 MORN5Q5VZ52 161 aa9.5□□□□□ -0.89
PDLIM2-212ENST00000443561 LAMTOR1Q6IAA8 161 aa9.5□□□□□ -0.89
PDLIM2-212ENST00000443561 WFDC3Q8IUB2 231 aa9.5□□□□□ -0.89
PDLIM2-212ENST00000443561 APRG1Q8IVJ8 170 aa9.5□□□□□ -0.89
PDLIM2-212ENST00000443561 BPIFCQ8NFQ6 507 aa9.5□□□□□ -0.89
PDLIM2-212ENST00000443561 CHAC2Q8WUX2 184 aa9.5□□□□□ -0.89
PDLIM2-212ENST00000443561 FAM110AQ9BQ89 295 aa9.5□□□□□ -0.89
PDLIM2-212ENST00000443561 TMEM147Q9BVK8 224 aa9.5□□□□□ -0.89
PDLIM2-212ENST00000443561 SCRT1Q9BWW7 348 aa9.5□□□□□ -0.89
PDLIM2-212ENST00000443561 SLC25A32Q9H2D1 315 aa9.5□□□□□ -0.89
PDLIM2-212ENST00000443561 RETNQ9HD89 108 aa9.5□□□□□ -0.89
PDLIM2-212ENST00000443561 DOK5Q9P104 306 aa9.5□□□□□ -0.89
PDLIM2-212ENST00000443561 TRAV2A0A0B4J234 112 aa9.49□□□□□ -0.89
PDLIM2-212ENST00000443561 UBE2L5PA0A1B0GUS4 154 aa9.49□□□□□ -0.89
PDLIM2-212ENST00000443561 OR4C46A6NHA9 309 aa9.49□□□□□ -0.89
PDLIM2-212ENST00000443561 MRPS12O15235 138 aaKnown RBP9.49□□□□□ -0.89
PDLIM2-212ENST00000443561 PVALBP20472 110 aaPredicted RBP9.49□□□□□ -0.89
PDLIM2-212ENST00000443561 PRR20EP86478 221 aa9.49□□□□□ -0.89
PDLIM2-212ENST00000443561 PRR20CP86479 221 aa9.49□□□□□ -0.89
PDLIM2-212ENST00000443561 PRR20DP86480 221 aa9.49□□□□□ -0.89
PDLIM2-212ENST00000443561 PRR20BP86481 221 aa9.49□□□□□ -0.89
PDLIM2-212ENST00000443561 PRR20AP86496 221 aa9.49□□□□□ -0.89
PDLIM2-212ENST00000443561 CYCSP99999 105 aaKnown RBP9.49□□□□□ -0.89
PDLIM2-212ENST00000443561 LEMD1Q68G75 181 aa9.49□□□□□ -0.89
PDLIM2-212ENST00000443561 TEPPQ6URK8 271 aa9.49□□□□□ -0.89
PDLIM2-212ENST00000443561 STXBP6Q8NFX7 210 aa9.49□□□□□ -0.89
PDLIM2-212ENST00000443561 UHRF2Q96PU4 802 aa9.49□□□□□ -0.89
PDLIM2-212ENST00000443561 WFDC1Q9HC57 220 aa9.49□□□□□ -0.89
PDLIM2-212ENST00000443561 NBEAL2Q6ZNJ1 2754 aa9.48□□□□□ -0.89
PDLIM2-212ENST00000443561 A0A1W2PS18 150 aa9.48□□□□□ -0.89
PDLIM2-212ENST00000443561 ZNF98A6NK75 572 aa9.48□□□□□ -0.89
PDLIM2-212ENST00000443561 ORM2P19652 201 aa9.48□□□□□ -0.89
PDLIM2-212ENST00000443561 DEFB1P60022 68 aa9.48□□□□□ -0.89
PDLIM2-212ENST00000443561 OPCMLQ14982 345 aa9.48□□□□□ -0.89
PDLIM2-212ENST00000443561 MIC13Q5XKP0 118 aa9.48□□□□□ -0.89
PDLIM2-212ENST00000443561 SIGLEC15Q6ZMC9 328 aa9.48□□□□□ -0.89
PDLIM2-212ENST00000443561 OR5C1Q8NGR4 320 aa9.48□□□□□ -0.89
PDLIM2-212ENST00000443561 OR1B1Q8NGR6 318 aa9.48□□□□□ -0.89
PDLIM2-212ENST00000443561 TMEM37Q8WXS4 190 aa9.48□□□□□ -0.89
PDLIM2-212ENST00000443561 MED28Q9H204 178 aa9.48□□□□□ -0.89
PDLIM2-212ENST00000443561 TMEM231Q9H6L2 316 aa9.48□□□□□ -0.89
PDLIM2-212ENST00000443561 UQCC1Q9NVA1 299 aa9.48□□□□□ -0.89
PDLIM2-212ENST00000443561 HSPB11Q9Y547 144 aa9.48□□□□□ -0.89
PDLIM2-212ENST00000443561 ZNF688P0C7X2 276 aa9.47□□□□□ -0.89
PDLIM2-212ENST00000443561 S100A11P31949 105 aa9.47□□□□□ -0.89
PDLIM2-212ENST00000443561 BMI1P35226 326 aa9.47□□□□□ -0.89
PDLIM2-212ENST00000443561 DEFB131AP59861 70 aa9.47□□□□□ -0.89
PDLIM2-212ENST00000443561 SHANK2-AS3Q9BTD1 123 aa9.47□□□□□ -0.89
PDLIM2-212ENST00000443561 SLC25A39Q9BZJ4 359 aaPredicted RBP9.47□□□□□ -0.89
PDLIM2-212ENST00000443561 RFNGQ9Y644 331 aa9.47□□□□□ -0.89
PDLIM2-212ENST00000443561 CD5P06127 495 aa9.46□□□□□ -0.9
PDLIM2-212ENST00000443561 FABP1P07148 127 aa9.46□□□□□ -0.9
PDLIM2-212ENST00000443561 CAMLGP49069 296 aa9.46□□□□□ -0.9
PDLIM2-212ENST00000443561 SELENOTP62341 195 aa9.46□□□□□ -0.9
PDLIM2-212ENST00000443561 CLINT1Q14677 625 aa9.46□□□□□ -0.9
PDLIM2-212ENST00000443561 C1orf194Q5T5A4 169 aa9.46□□□□□ -0.9
PDLIM2-212ENST00000443561 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.46□□□□□ -0.9
PDLIM2-212ENST00000443561 STX12Q86Y82 276 aa9.46□□□□□ -0.9
PDLIM2-212ENST00000443561 THAP6Q8TBB0 222 aa9.46□□□□□ -0.9
PDLIM2-212ENST00000443561 C20orf173Q96LM9 149 aa9.46□□□□□ -0.9
PDLIM2-212ENST00000443561 ARL6Q9H0F7 186 aa9.46□□□□□ -0.9
PDLIM2-212ENST00000443561 TUBA4BQ9H853 241 aa9.46□□□□□ -0.9
PDLIM2-212ENST00000443561 HELTA6NFD8 242 aa9.45□□□□□ -0.9
PDLIM2-212ENST00000443561 CFDP00746 253 aaPredicted RBP9.45□□□□□ -0.9
PDLIM2-212ENST00000443561 RLN2P04090 185 aa9.45□□□□□ -0.9
PDLIM2-212ENST00000443561 GIG44P09565 113 aaPredicted RBP9.45□□□□□ -0.9
PDLIM2-212ENST00000443561 GIPP09681 153 aaPredicted RBP9.45□□□□□ -0.9
PDLIM2-212ENST00000443561 FGF7P21781 194 aa9.45□□□□□ -0.9
PDLIM2-212ENST00000443561 RPL11P62913 178 aaKnown RBP9.45□□□□□ -0.9
PDLIM2-212ENST00000443561 ATP6V1FQ16864 119 aa9.45□□□□□ -0.9
PDLIM2-212ENST00000443561 GCSAMLQ5JQS6 135 aa9.45□□□□□ -0.9
PDLIM2-212ENST00000443561 ZNF546Q86UE3 836 aa9.45□□□□□ -0.9
PDLIM2-212ENST00000443561 GRAMD2BQ96HH9 432 aa9.45□□□□□ -0.9
PDLIM2-212ENST00000443561 ARV1Q9H2C2 271 aa9.45□□□□□ -0.9
PDLIM2-212ENST00000443561 SLC25A22Q9H936 323 aa9.45□□□□□ -0.9
PDLIM2-212ENST00000443561 NRN1Q9NPD7 142 aa9.45□□□□□ -0.9
PDLIM2-212ENST00000443561 HIGD1AQ9Y241 93 aa9.45□□□□□ -0.9
PDLIM2-212ENST00000443561 TRAV8-2A0A0B4J237 113 aa9.44□□□□□ -0.9
PDLIM2-212ENST00000443561 RNF222A6NCQ9 220 aa9.44□□□□□ -0.9
PDLIM2-212ENST00000443561 KNCNA6PVL3 124 aa9.44□□□□□ -0.9
PDLIM2-212ENST00000443561 DNASE2O00115 360 aaPredicted RBP9.44□□□□□ -0.9
PDLIM2-212ENST00000443561 HYPMO75409 117 aa9.44□□□□□ -0.9
PDLIM2-212ENST00000443561 NHLRC4P0CG21 123 aaPredicted RBP9.44□□□□□ -0.9
PDLIM2-212ENST00000443561 RPL35AP18077 110 aaKnown RBP9.44□□□□□ -0.9
PDLIM2-212ENST00000443561 RPL12P30050 165 aaKnown RBP9.44□□□□□ -0.9
PDLIM2-212ENST00000443561 RPL29P47914 159 aaKnown RBP9.44□□□□□ -0.9
PDLIM2-212ENST00000443561 HBG1P69891 147 aa9.44□□□□□ -0.9
PDLIM2-212ENST00000443561 HBG2P69892 147 aa9.44□□□□□ -0.9
PDLIM2-212ENST00000443561 BAXQ07812 192 aa9.44□□□□□ -0.9
PDLIM2-212ENST00000443561 GDF5OSQ5U4N7 250 aa9.44□□□□□ -0.9
PDLIM2-212ENST00000443561 NARS2Q96I59 477 aaKnown RBP9.44□□□□□ -0.9
PDLIM2-212ENST00000443561 RCHY1Q96PM5 261 aa9.44□□□□□ -0.9
PDLIM2-212ENST00000443561 NPCDR1Q9BY65 106 aa9.44□□□□□ -0.9
PDLIM2-212ENST00000443561 SMIM3Q9BZL3 60 aa9.44□□□□□ -0.9
PDLIM2-212ENST00000443561 WDR61Q9GZS3 305 aaKnown RBP9.44□□□□□ -0.9
PDLIM2-212ENST00000443561 SLC25A31Q9H0C2 315 aa9.44□□□□□ -0.9
PDLIM2-212ENST00000443561 LOC102724200A0A096LPH7 203 aaPredicted RBP9.43□□□□□ -0.9
PDLIM2-212ENST00000443561 TRAV5A0A0B4J249 113 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms