RNA–Protein interactions for RNA: ENST00000442975.6

CDKN3-204, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best) BASIC

Gene CDKN3, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-204ENST00000442975 LYSTQ99698 3801 aa15.4■□□□□ 0.06
CDKN3-204ENST00000442975 JTBO76095 146 aa15.4■□□□□ 0.06
CDKN3-204ENST00000442975 SPP1P10451 314 aa15.4■□□□□ 0.06
CDKN3-204ENST00000442975 PAX9P55771 341 aa15.4■□□□□ 0.06
CDKN3-204ENST00000442975 C1orf194Q5T5A4 169 aa15.4■□□□□ 0.06
CDKN3-204ENST00000442975 GSG1LQ6UXU4 331 aa15.4■□□□□ 0.06
CDKN3-204ENST00000442975 LINC00052Q96N35 136 aa15.4■□□□□ 0.06
CDKN3-204ENST00000442975 TMEM147Q9BVK8 224 aa15.4■□□□□ 0.06
CDKN3-204ENST00000442975 DOK5Q9P104 306 aa15.4■□□□□ 0.06
CDKN3-204ENST00000442975 C5orf51A6NDU8 294 aa15.39■□□□□ 0.05
CDKN3-204ENST00000442975 A6NHS1 94 aa15.39■□□□□ 0.05
CDKN3-204ENST00000442975 MBPP02686 304 aaPredicted RBP15.39■□□□□ 0.05
CDKN3-204ENST00000442975 PLECQ15149 4684 aaKnown RBP15.39■□□□□ 0.05
CDKN3-204ENST00000442975 MORN3Q6PF18 240 aaPredicted RBP15.39■□□□□ 0.05
CDKN3-204ENST00000442975 TMEM14EPQ6UXP3 125 aa15.39■□□□□ 0.05
CDKN3-204ENST00000442975 TMEM182Q6ZP80 229 aaPredicted RBP15.39■□□□□ 0.05
CDKN3-204ENST00000442975 TMEM144Q7Z5S9 345 aa15.39■□□□□ 0.05
CDKN3-204ENST00000442975 WDR12Q9GZL7 423 aaKnown RBP15.39■□□□□ 0.05
CDKN3-204ENST00000442975 PTTG2Q9NZH5 202 aa15.39■□□□□ 0.05
CDKN3-204ENST00000442975 MGAT4CQ9UBM8 478 aa15.39■□□□□ 0.05
CDKN3-204ENST00000442975 PMS2P5A8MQ11 134 aa15.38■□□□□ 0.05
CDKN3-204ENST00000442975 L7N2F9 121 aa15.38■□□□□ 0.05
CDKN3-204ENST00000442975 TSC22D2O75157 780 aa15.38■□□□□ 0.05
CDKN3-204ENST00000442975 IL5P05113 134 aa15.38■□□□□ 0.05
CDKN3-204ENST00000442975 TAS2R30P59541 319 aa15.38■□□□□ 0.05
CDKN3-204ENST00000442975 VAMP2P63027 116 aa15.38■□□□□ 0.05
CDKN3-204ENST00000442975 DLK1P80370 383 aa15.38■□□□□ 0.05
CDKN3-204ENST00000442975 ASAH1Q13510 395 aa15.38■□□□□ 0.05
CDKN3-204ENST00000442975 CYP2G1PQ6ZSU1 146 aa15.38■□□□□ 0.05
CDKN3-204ENST00000442975 C12orf45Q8N5I9 185 aaPredicted RBP15.38■□□□□ 0.05
CDKN3-204ENST00000442975 OR10P1Q8NGE3 313 aa15.38■□□□□ 0.05
CDKN3-204ENST00000442975 ENKURQ8TC29 256 aa15.38■□□□□ 0.05
CDKN3-204ENST00000442975 SLC25A32Q9H2D1 315 aa15.38■□□□□ 0.05
CDKN3-204ENST00000442975 SEPSECSQ9HD40 501 aaKnown RBP15.38■□□□□ 0.05
CDKN3-204ENST00000442975 CLEC5AQ9NY25 188 aa15.38■□□□□ 0.05
CDKN3-204ENST00000442975 LSM5Q9Y4Y9 91 aaKnown RBP15.38■□□□□ 0.05
CDKN3-204ENST00000442975 ALMS1Q8TCU4 4167 aa15.38■□□□□ 0.05
CDKN3-204ENST00000442975 DEFB4AO15263 64 aa15.37■□□□□ 0.05
CDKN3-204ENST00000442975 GIG44P09565 113 aaPredicted RBP15.37■□□□□ 0.05
CDKN3-204ENST00000442975 ID1P41134 155 aa15.37■□□□□ 0.05
CDKN3-204ENST00000442975 TMEM41BQ5BJD5 291 aa15.37■□□□□ 0.05
CDKN3-204ENST00000442975 SLC45A2Q9UMX9 530 aa15.37■□□□□ 0.05
CDKN3-204ENST00000442975 DNAH1Q9P2D7 4330 aa15.36■□□□□ 0.05
CDKN3-204ENST00000442975 C7orf66A4D0T2 115 aa15.36■□□□□ 0.05
CDKN3-204ENST00000442975 NUPR2A6NF83 97 aa15.36■□□□□ 0.05
CDKN3-204ENST00000442975 LINC00869P0C866 280 aa15.36■□□□□ 0.05
CDKN3-204ENST00000442975 GALR1P47211 349 aa15.36■□□□□ 0.05
CDKN3-204ENST00000442975 PSMB3P49720 205 aa15.36■□□□□ 0.05
CDKN3-204ENST00000442975 BCAP31P51572 246 aa15.36■□□□□ 0.05
CDKN3-204ENST00000442975 DEFB1P60022 68 aa15.36■□□□□ 0.05
CDKN3-204ENST00000442975 S100A10P60903 97 aa15.36■□□□□ 0.05
CDKN3-204ENST00000442975 SLC38A11Q08AI6 406 aa15.36■□□□□ 0.05
CDKN3-204ENST00000442975 SCRT1Q9BWW7 348 aa15.36■□□□□ 0.05
CDKN3-204ENST00000442975 C11orf68Q9H3H3 251 aaKnown RBP15.36■□□□□ 0.05
CDKN3-204ENST00000442975 ZNF98A6NK75 572 aa15.35■□□□□ 0.05
CDKN3-204ENST00000442975 UPK1BO75841 260 aa15.35■□□□□ 0.05
CDKN3-204ENST00000442975 ATF4P18848 351 aaPredicted RBP15.35■□□□□ 0.05
CDKN3-204ENST00000442975 S100A7P31151 101 aa15.35■□□□□ 0.05
CDKN3-204ENST00000442975 CAV2P51636 162 aa15.35■□□□□ 0.05
CDKN3-204ENST00000442975 H3BMM0 161 aa15.34■□□□□ 0.05
CDKN3-204ENST00000442975 K7EPK0 472 aa15.34■□□□□ 0.05
CDKN3-204ENST00000442975 SOCS3O14543 225 aa15.34■□□□□ 0.05
CDKN3-204ENST00000442975 IGKV3-20P01619 116 aa15.34■□□□□ 0.05
CDKN3-204ENST00000442975 HLA-DRB4P13762 266 aa15.34■□□□□ 0.05
CDKN3-204ENST00000442975 RAP2BP61225 183 aa15.34■□□□□ 0.05
CDKN3-204ENST00000442975 NUTF2P61970 127 aaKnown RBP15.34■□□□□ 0.05
CDKN3-204ENST00000442975 C16orf92Q96LL3 132 aa15.34■□□□□ 0.05
CDKN3-204ENST00000442975 C2orf50Q96LR7 162 aa15.34■□□□□ 0.05
CDKN3-204ENST00000442975 HIGD1AQ9Y241 93 aa15.34■□□□□ 0.05
CDKN3-204ENST00000442975 HLA-DRB4X5D2U9 266 aa15.34■□□□□ 0.05
CDKN3-204ENST00000442975 ISLRO14498 428 aa15.33■□□□□ 0.04
CDKN3-204ENST00000442975 OR5G3P0C626 314 aa15.33■□□□□ 0.04
CDKN3-204ENST00000442975 SELENOTP62341 195 aa15.33■□□□□ 0.04
CDKN3-204ENST00000442975 ARL16Q0P5N6 197 aa15.33■□□□□ 0.04
CDKN3-204ENST00000442975 GDF5OSQ5U4N7 250 aa15.33■□□□□ 0.04
CDKN3-204ENST00000442975 SAMD13Q5VXD3 122 aa15.33■□□□□ 0.04
CDKN3-204ENST00000442975 TEPPQ6URK8 271 aa15.33■□□□□ 0.04
CDKN3-204ENST00000442975 RSG1Q9BU20 258 aa15.33■□□□□ 0.04
CDKN3-204ENST00000442975 NPVFQ9HCQ7 196 aa15.33■□□□□ 0.04
CDKN3-204ENST00000442975 IGHV4-28A0A0C4DH34 117 aa15.32■□□□□ 0.04
CDKN3-204ENST00000442975 FNDC10F2Z333 226 aa15.32■□□□□ 0.04
CDKN3-204ENST00000442975 HYPMO75409 117 aa15.32■□□□□ 0.04
CDKN3-204ENST00000442975 MEOX2P50222 304 aa15.32■□□□□ 0.04
CDKN3-204ENST00000442975 NANOS2P60321 138 aaKnown RBP15.32■□□□□ 0.04
CDKN3-204ENST00000442975 CEMP1Q6PRD7 247 aaPredicted RBP15.32■□□□□ 0.04
CDKN3-204ENST00000442975 FOXI2Q6ZQN5 318 aa15.32■□□□□ 0.04
CDKN3-204ENST00000442975 C11orf45Q8TAV5 145 aa15.32■□□□□ 0.04
CDKN3-204ENST00000442975 SLC25A39Q9BZJ4 359 aaPredicted RBP15.32■□□□□ 0.04
CDKN3-204ENST00000442975 XCL2Q9UBD3 114 aa15.32■□□□□ 0.04
CDKN3-204ENST00000442975 H3BRN7 92 aa15.31■□□□□ 0.04
CDKN3-204ENST00000442975 PVALBP20472 110 aaPredicted RBP15.31■□□□□ 0.04
CDKN3-204ENST00000442975 ZNF546Q86UE3 836 aa15.31■□□□□ 0.04
CDKN3-204ENST00000442975 Q8NAQ8 132 aa15.31■□□□□ 0.04
CDKN3-204ENST00000442975 GPR82Q96P67 336 aa15.31■□□□□ 0.04
CDKN3-204ENST00000442975 UHRF2Q96PU4 802 aa15.31■□□□□ 0.04
CDKN3-204ENST00000442975 SHANK2-AS3Q9BTD1 123 aa15.31■□□□□ 0.04
CDKN3-204ENST00000442975 C1QTNF4Q9BXJ3 329 aa15.31■□□□□ 0.04
CDKN3-204ENST00000442975 ARL6Q9H0F7 186 aa15.31■□□□□ 0.04
CDKN3-204ENST00000442975 SAV1Q9H4B6 383 aaPredicted RBP15.31■□□□□ 0.04
CDKN3-204ENST00000442975 CST7O76096 145 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms