RNA–Protein interactions for RNA: ENST00000441438.2

SYNE2-206, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,084 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-206ENST00000441438 ADARB2-AS1A8MUL3 147 aa8.32□□□□□ -1.08
SYNE2-206ENST00000441438 CDX4O14627 284 aaPredicted RBP8.32□□□□□ -1.08
SYNE2-206ENST00000441438 SRSF10O75494 262 aaKnown RBP8.32□□□□□ -1.08
SYNE2-206ENST00000441438 TMEM255BQ8WV15 326 aa8.32□□□□□ -1.08
SYNE2-206ENST00000441438 FGF22Q9HCT0 170 aa8.32□□□□□ -1.08
SYNE2-206ENST00000441438 CACNG5Q9UF02 275 aa8.32□□□□□ -1.08
SYNE2-206ENST00000441438 PIN1P1O15428 100 aa8.31□□□□□ -1.08
SYNE2-206ENST00000441438 PDCD6O75340 191 aa8.31□□□□□ -1.08
SYNE2-206ENST00000441438 NNATQ16517 81 aa8.31□□□□□ -1.08
SYNE2-206ENST00000441438 AMTNQ6UX39 209 aa8.31□□□□□ -1.08
SYNE2-206ENST00000441438 WFDC11Q8NEX6 87 aa8.31□□□□□ -1.08
SYNE2-206ENST00000441438 VSTM2AQ8TAG5 236 aa8.31□□□□□ -1.08
SYNE2-206ENST00000441438 IGFBPL1Q8WX77 278 aa8.31□□□□□ -1.08
SYNE2-206ENST00000441438 FXYD5Q96DB9 178 aa8.31□□□□□ -1.08
SYNE2-206ENST00000441438 METTL26Q96S19 204 aa8.31□□□□□ -1.08
SYNE2-206ENST00000441438 PRSS27Q9BQR3 290 aa8.31□□□□□ -1.08
SYNE2-206ENST00000441438 ESM1Q9NQ30 184 aa8.31□□□□□ -1.08
SYNE2-206ENST00000441438 UQCRQO14949 82 aa8.31□□□□□ -1.08
SYNE2-206ENST00000441438 DUSP14O95147 198 aaKnown RBP8.31□□□□□ -1.08
SYNE2-206ENST00000441438 SPAG17Q6Q759 2223 aa8.31□□□□□ -1.08
SYNE2-206ENST00000441438 TRAPPC6BQ86SZ2 158 aa8.31□□□□□ -1.08
SYNE2-206ENST00000441438 ZNF114Q8NC26 417 aa8.31□□□□□ -1.08
SYNE2-206ENST00000441438 ATP6V0E2Q8NHE4 81 aa8.31□□□□□ -1.08
SYNE2-206ENST00000441438 ZNF727A8MUV8 499 aa8.3□□□□□ -1.08
SYNE2-206ENST00000441438 TMEM250H0YL14 139 aa8.3□□□□□ -1.08
SYNE2-206ENST00000441438 GYPBP06028 91 aa8.3□□□□□ -1.08
SYNE2-206ENST00000441438 DEFB110Q30KQ9 67 aa8.3□□□□□ -1.08
SYNE2-206ENST00000441438 C4orf45Q96LM5 186 aa8.3□□□□□ -1.08
SYNE2-206ENST00000441438 ANAPC10Q9UM13 185 aa8.3□□□□□ -1.08
SYNE2-206ENST00000441438 SPCS1Q9Y6A9 102 aa8.3□□□□□ -1.08
SYNE2-206ENST00000441438 HEATR5AQ86XA9 2040 aa8.3□□□□□ -1.08
SYNE2-206ENST00000441438 LMO1P25800 156 aa8.3□□□□□ -1.08
SYNE2-206ENST00000441438 PEBP1P30086 187 aaKnown RBP8.3□□□□□ -1.08
SYNE2-206ENST00000441438 DPTQ07507 201 aa8.3□□□□□ -1.08
SYNE2-206ENST00000441438 TMEM187Q14656 261 aa8.3□□□□□ -1.08
SYNE2-206ENST00000441438 SLC25A34Q6PIV7 304 aa8.3□□□□□ -1.08
SYNE2-206ENST00000441438 ABCA7Q8IZY2 2146 aa8.3□□□□□ -1.08
SYNE2-206ENST00000441438 MS4A6EQ96DS6 147 aa8.3□□□□□ -1.08
SYNE2-206ENST00000441438 IGKV1D-8A0A087WSZ0 117 aa8.29□□□□□ -1.08
SYNE2-206ENST00000441438 H3BSH0 61 aa8.29□□□□□ -1.08
SYNE2-206ENST00000441438 SOCS1O15524 211 aa8.29□□□□□ -1.08
SYNE2-206ENST00000441438 SLC25A5P05141 298 aaKnown RBP8.29□□□□□ -1.08
SYNE2-206ENST00000441438 ZNF136P52737 540 aa8.29□□□□□ -1.08
SYNE2-206ENST00000441438 AAED1Q7RTV5 226 aa8.29□□□□□ -1.08
SYNE2-206ENST00000441438 COX14Q96I36 57 aa8.29□□□□□ -1.08
SYNE2-206ENST00000441438 PRR32B1ATL7 298 aa8.29□□□□□ -1.08
SYNE2-206ENST00000441438 H3BRM9 83 aa8.29□□□□□ -1.08
SYNE2-206ENST00000441438 TIMM23O14925 209 aa8.29□□□□□ -1.08
SYNE2-206ENST00000441438 GP1BBP13224 206 aa8.29□□□□□ -1.08
SYNE2-206ENST00000441438 RRN3P1Q2M238 152 aa8.29□□□□□ -1.08
SYNE2-206ENST00000441438 ZNF260Q3ZCT1 412 aa8.29□□□□□ -1.08
SYNE2-206ENST00000441438 Q6ZWC4 215 aa8.29□□□□□ -1.08
SYNE2-206ENST00000441438 C16orf95Q9H693 158 aa8.29□□□□□ -1.08
SYNE2-206ENST00000441438 CACNA1HO95180 2353 aa8.29□□□□□ -1.08
SYNE2-206ENST00000441438 TRBV6-7A0A0A0MS04 114 aa8.28□□□□□ -1.08
SYNE2-206ENST00000441438 M0R2P5 195 aa8.28□□□□□ -1.08
SYNE2-206ENST00000441438 PPP1R3DO95685 299 aa8.28□□□□□ -1.08
SYNE2-206ENST00000441438 CA6P23280 308 aa8.28□□□□□ -1.08
SYNE2-206ENST00000441438 RIGQ13278 110 aa8.28□□□□□ -1.08
SYNE2-206ENST00000441438 KLF17Q5JT82 389 aaPredicted RBP8.28□□□□□ -1.08
SYNE2-206ENST00000441438 ACP7Q6ZNF0 438 aa8.28□□□□□ -1.08
SYNE2-206ENST00000441438 ZIC4Q8N9L1 334 aa8.28□□□□□ -1.08
SYNE2-206ENST00000441438 OR10AG1Q8NH19 301 aa8.28□□□□□ -1.08
SYNE2-206ENST00000441438 LAMTOR3Q9UHA4 124 aa8.28□□□□□ -1.08
SYNE2-206ENST00000441438 COL27A1Q8IZC6 1860 aaPredicted RBP8.28□□□□□ -1.08
SYNE2-206ENST00000441438 CEP192Q8TEP8 1941 aa8.28□□□□□ -1.08
SYNE2-206ENST00000441438 MUC21A0A140T8X8 626 aa8.28□□□□□ -1.08
SYNE2-206ENST00000441438 WI2-2373I1.2A0A1W2PRP0 233 aa8.28□□□□□ -1.08
SYNE2-206ENST00000441438 SNURFLB1AK76 121 aa8.28□□□□□ -1.08
SYNE2-206ENST00000441438 ETV2O00321 342 aaPredicted RBP8.28□□□□□ -1.08
SYNE2-206ENST00000441438 MPV17L2Q567V2 206 aa8.28□□□□□ -1.08
SYNE2-206ENST00000441438 MUC21Q5SSG8 566 aa8.28□□□□□ -1.08
SYNE2-206ENST00000441438 KLK5Q9Y337 293 aaPredicted RBP8.28□□□□□ -1.08
SYNE2-206ENST00000441438 TPT1P13693 172 aaKnown RBP8.28□□□□□ -1.08
SYNE2-206ENST00000441438 SPRNQ5BIV9 151 aa8.28□□□□□ -1.08
SYNE2-206ENST00000441438 STPG1Q5TH74 334 aa8.28□□□□□ -1.08
SYNE2-206ENST00000441438 GVQW1Q8N7I0 195 aa8.28□□□□□ -1.08
SYNE2-206ENST00000441438 IZUMO1RA6ND01 250 aa8.27□□□□□ -1.09
SYNE2-206ENST00000441438 SEC11AP67812 179 aa8.27□□□□□ -1.09
SYNE2-206ENST00000441438 RAB42Q8N4Z0 105 aa8.27□□□□□ -1.09
SYNE2-206ENST00000441438 PFN4Q8NHR9 129 aa8.27□□□□□ -1.09
SYNE2-206ENST00000441438 NMNAT3Q96T66 252 aa8.27□□□□□ -1.09
SYNE2-206ENST00000441438 SPANXDQ9BXN6 97 aa8.27□□□□□ -1.09
SYNE2-206ENST00000441438 FRYQ5TBA9 3013 aa8.27□□□□□ -1.09
SYNE2-206ENST00000441438 TRBV19A0A075B6N1 114 aa8.27□□□□□ -1.09
SYNE2-206ENST00000441438 IGLV1-36A0A0B4J1U3 117 aa8.27□□□□□ -1.09
SYNE2-206ENST00000441438 LOC107986453A0A1B0GWG9 222 aa8.27□□□□□ -1.09
SYNE2-206ENST00000441438 GPANK1O95872 356 aa8.27□□□□□ -1.09
SYNE2-206ENST00000441438 CRYGSP22914 178 aa8.27□□□□□ -1.09
SYNE2-206ENST00000441438 RFLNBQ8N5W9 214 aa8.27□□□□□ -1.09
SYNE2-206ENST00000441438 FAM186AA6NE01 2351 aa8.27□□□□□ -1.09
SYNE2-206ENST00000441438 FOXS1O43638 330 aa8.26□□□□□ -1.09
SYNE2-206ENST00000441438 TAS2R19P59542 299 aa8.26□□□□□ -1.09
SYNE2-206ENST00000441438 GAGE13Q4V321 117 aa8.26□□□□□ -1.09
SYNE2-206ENST00000441438 PCP2Q8IVA1 136 aa8.26□□□□□ -1.09
SYNE2-206ENST00000441438 NDUFS7O75251 213 aa8.26□□□□□ -1.09
SYNE2-206ENST00000441438 IGHG1P01857 330 aa8.26□□□□□ -1.09
SYNE2-206ENST00000441438 CRISP2P16562 243 aa8.26□□□□□ -1.09
SYNE2-206ENST00000441438 POU3F1Q03052 451 aaPredicted RBP8.26□□□□□ -1.09
SYNE2-206ENST00000441438 FAM222AQ5U5X8 452 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms