RNA–Protein interactions for RNA: ENST00000441080.2

PFDN4-202, Transcript of prefoldin subunit 4, humanhuman

TSL 5

Gene PFDN4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-202ENST00000441080 SNRNP200O75643 2136 aaKnown RBP0.73□□□□□ -2.29
PFDN4-202ENST00000441080 FMN1Q68DA7 1419 aa0.72□□□□□ -2.29
PFDN4-202ENST00000441080 GPR98Q8WXG9 6306 aa0.72□□□□□ -2.29
PFDN4-202ENST00000441080 SCN10AQ9Y5Y9 1956 aa0.72□□□□□ -2.29
PFDN4-202ENST00000441080 MED12Q93074 2177 aa0.72□□□□□ -2.29
PFDN4-202ENST00000441080 AHNAKQ09666 5890 aaKnown RBP0.72□□□□□ -2.29
PFDN4-202ENST00000441080 TRBV19A0A075B6N1 114 aa0.72□□□□□ -2.29
PFDN4-202ENST00000441080 TLCD2A6NGC4 264 aa0.72□□□□□ -2.29
PFDN4-202ENST00000441080 NUPR1O60356 82 aa0.72□□□□□ -2.29
PFDN4-202ENST00000441080 BCL2L15Q5TBC7 163 aa0.72□□□□□ -2.29
PFDN4-202ENST00000441080 OR10K1Q8NGX5 313 aa0.72□□□□□ -2.29
PFDN4-202ENST00000441080 SLC25A21Q9BQT8 299 aaPredicted RBP0.72□□□□□ -2.29
PFDN4-202ENST00000441080 FAM32AQ9Y421 112 aaKnown RBP0.72□□□□□ -2.29
PFDN4-202ENST00000441080 MCM3APO60318 1980 aa0.71□□□□□ -2.3
PFDN4-202ENST00000441080 ATP5G3P48201 142 aa0.71□□□□□ -2.3
PFDN4-202ENST00000441080 LINC00052Q96N35 136 aa0.71□□□□□ -2.3
PFDN4-202ENST00000441080 IMUPQ9GZP8 106 aa0.71□□□□□ -2.3
PFDN4-202ENST00000441080 LY96Q9Y6Y9 160 aa0.71□□□□□ -2.3
PFDN4-202ENST00000441080 ARHGEF28Q8N1W1 1705 aaKnown RBP0.71□□□□□ -2.3
PFDN4-202ENST00000441080 CNTRLQ7Z7A1 2325 aa0.71□□□□□ -2.3
PFDN4-202ENST00000441080 COL1A1P02452 1464 aaPredicted RBP0.7□□□□□ -2.3
PFDN4-202ENST00000441080 TAX1BP3O14907 124 aa0.7□□□□□ -2.3
PFDN4-202ENST00000441080 CD2P06729 351 aa0.7□□□□□ -2.3
PFDN4-202ENST00000441080 ROMO1P60602 79 aa0.7□□□□□ -2.3
PFDN4-202ENST00000441080 AKIRIN2Q53H80 203 aa0.7□□□□□ -2.3
PFDN4-202ENST00000441080 C4orf22Q6V702 233 aa0.7□□□□□ -2.3
PFDN4-202ENST00000441080 PLPP5Q8NEB5 264 aa0.7□□□□□ -2.3
PFDN4-202ENST00000441080 ENY2Q9NPA8 101 aa0.7□□□□□ -2.3
PFDN4-202ENST00000441080 PCTPQ9UKL6 214 aa0.7□□□□□ -2.3
PFDN4-202ENST00000441080 TNS3Q68CZ2 1445 aa0.7□□□□□ -2.3
PFDN4-202ENST00000441080 E9PCH4 1651 aa0.69□□□□□ -2.3
PFDN4-202ENST00000441080 TRAV10A0A0B4J240 114 aa0.69□□□□□ -2.3
PFDN4-202ENST00000441080 OR2T8A6NH00 312 aa0.69□□□□□ -2.3
PFDN4-202ENST00000441080 FAM159BA6NKW6 160 aa0.69□□□□□ -2.3
PFDN4-202ENST00000441080 CST8O60676 142 aa0.69□□□□□ -2.3
PFDN4-202ENST00000441080 ERVS71-1P61550 626 aa0.69□□□□□ -2.3
PFDN4-202ENST00000441080 MYL5Q02045 173 aa0.69□□□□□ -2.3
PFDN4-202ENST00000441080 MNS1Q8NEH6 495 aa0.69□□□□□ -2.3
PFDN4-202ENST00000441080 OR5D14Q8NGL3 314 aa0.69□□□□□ -2.3
PFDN4-202ENST00000441080 OR10X1Q8NGY0 326 aa0.69□□□□□ -2.3
PFDN4-202ENST00000441080 TNFSF18Q9UNG2 199 aa0.69□□□□□ -2.3
PFDN4-202ENST00000441080 KDM6AO15550 1401 aaPredicted RBP0.69□□□□□ -2.3
PFDN4-202ENST00000441080 IFNA7P01567 189 aa0.68□□□□□ -2.3
PFDN4-202ENST00000441080 CTXN2P0C2S0 81 aa0.68□□□□□ -2.3
PFDN4-202ENST00000441080 ZNF833PQ6ZTB9 187 aa0.68□□□□□ -2.3
PFDN4-202ENST00000441080 GOLT1AQ6ZVE7 132 aa0.68□□□□□ -2.3
PFDN4-202ENST00000441080 PEAK1Q9H792 1746 aa0.68□□□□□ -2.3
PFDN4-202ENST00000441080 OPTCQ9UBM4 332 aa0.68□□□□□ -2.3
PFDN4-202ENST00000441080 ARL2BPQ9Y2Y0 163 aa0.68□□□□□ -2.3
PFDN4-202ENST00000441080 IGLV3-32A0A0A0MS00 114 aa0.67□□□□□ -2.3
PFDN4-202ENST00000441080 E7EUB6 86 aa0.67□□□□□ -2.3
PFDN4-202ENST00000441080 HMGB3O15347 200 aaKnown RBP0.67□□□□□ -2.3
PFDN4-202ENST00000441080 DSCR4P56555 118 aaPredicted RBP0.67□□□□□ -2.3
PFDN4-202ENST00000441080 UBE2BP63146 152 aa0.67□□□□□ -2.3
PFDN4-202ENST00000441080 CANT1Q8WVQ1 401 aa0.67□□□□□ -2.3
PFDN4-202ENST00000441080 PSTPIP2Q9H939 334 aa0.67□□□□□ -2.3
PFDN4-202ENST00000441080 F8W1H4 67 aa0.66□□□□□ -2.3
PFDN4-202ENST00000441080 M0R378 163 aa0.66□□□□□ -2.3
PFDN4-202ENST00000441080 ERC2-IT1O76042 136 aa0.66□□□□□ -2.3
PFDN4-202ENST00000441080 SERPINA1P01009 418 aa0.66□□□□□ -2.3
PFDN4-202ENST00000441080 CST2P09228 141 aa0.66□□□□□ -2.3
PFDN4-202ENST00000441080 REEP5Q00765 189 aa0.66□□□□□ -2.3
PFDN4-202ENST00000441080 EIF5AL1Q6IS14 154 aaKnown RBP0.66□□□□□ -2.3
PFDN4-202ENST00000441080 HAGHLQ6PII5 290 aaPredicted RBP0.66□□□□□ -2.3
PFDN4-202ENST00000441080 SPATA8Q6RVD6 105 aa0.66□□□□□ -2.3
PFDN4-202ENST00000441080 TEN1Q86WV5 123 aa0.66□□□□□ -2.3
PFDN4-202ENST00000441080 C9orf16Q9BUW7 83 aa0.66□□□□□ -2.3
PFDN4-202ENST00000441080 KIAA1549Q9HCM3 1950 aa0.65□□□□□ -2.31
PFDN4-202ENST00000441080 B4DSR2 109 aa0.65□□□□□ -2.31
PFDN4-202ENST00000441080 H3BRM9 83 aa0.65□□□□□ -2.31
PFDN4-202ENST00000441080 GGCTO75223 188 aaKnown RBP0.65□□□□□ -2.31
PFDN4-202ENST00000441080 FADDQ13158 208 aa0.65□□□□□ -2.31
PFDN4-202ENST00000441080 TAF1AQ15573 450 aaPredicted RBP0.65□□□□□ -2.31
PFDN4-202ENST00000441080 KRTAP26-1Q6PEX3 210 aa0.65□□□□□ -2.31
PFDN4-202ENST00000441080 GRINAQ7Z429 371 aa0.65□□□□□ -2.31
PFDN4-202ENST00000441080 NPCDR1Q9BY65 106 aa0.65□□□□□ -2.31
PFDN4-202ENST00000441080 SCN8AQ9UQD0 1980 aa0.65□□□□□ -2.31
PFDN4-202ENST00000441080 ARHGEF11O15085 1522 aa0.64□□□□□ -2.31
PFDN4-202ENST00000441080 TMEM256-PLSCR3K7ERE1 68 aa0.64□□□□□ -2.31
PFDN4-202ENST00000441080 IFNA6P05013 189 aa0.64□□□□□ -2.31
PFDN4-202ENST00000441080 CYBAP13498 195 aa0.64□□□□□ -2.31
PFDN4-202ENST00000441080 HLA-EP13747 358 aa0.64□□□□□ -2.31
PFDN4-202ENST00000441080 HOXA6P31267 233 aa0.64□□□□□ -2.31
PFDN4-202ENST00000441080 HSPE1P61604 102 aaKnown RBP0.64□□□□□ -2.31
PFDN4-202ENST00000441080 CDK6Q00534 326 aa0.64□□□□□ -2.31
PFDN4-202ENST00000441080 ZNF431Q8TF32 576 aaPredicted RBP0.64□□□□□ -2.31
PFDN4-202ENST00000441080 DGCR14Q96DF8 476 aaKnown RBP0.64□□□□□ -2.31
PFDN4-202ENST00000441080 TEX37Q96LM6 180 aa0.64□□□□□ -2.31
PFDN4-202ENST00000441080 TMEM138Q9NPI0 162 aa0.64□□□□□ -2.31
PFDN4-202ENST00000441080 OBSL1O75147 1896 aa0.63□□□□□ -2.31
PFDN4-202ENST00000441080 C17orf112F2Z3M2 114 aa0.63□□□□□ -2.31
PFDN4-202ENST00000441080 IGLV3-1P01715 115 aa0.63□□□□□ -2.31
PFDN4-202ENST00000441080 C1orf134Q5TEV5 83 aa0.63□□□□□ -2.31
PFDN4-202ENST00000441080 Q8TAT8 98 aa0.63□□□□□ -2.31
PFDN4-202ENST00000441080 PBOV1Q9GZY1 135 aa0.63□□□□□ -2.31
PFDN4-202ENST00000441080 MYH10P35580 1976 aa0.63□□□□□ -2.31
PFDN4-202ENST00000441080 M0R233 179 aa0.62□□□□□ -2.31
PFDN4-202ENST00000441080 S100A6P06703 90 aa0.62□□□□□ -2.31
PFDN4-202ENST00000441080 OR10J4P0C629 311 aa0.62□□□□□ -2.31
PFDN4-202ENST00000441080 CXCL8P10145 99 aa0.62□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms