RNA–Protein interactions for RNA: ENST00000440514.1

CPSF4-205, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-205ENST00000440514 BUB3O43684 328 aa13.41□□□□□ -0.26
CPSF4-205ENST00000440514 BAXQ07812 192 aa13.41□□□□□ -0.26
CPSF4-205ENST00000440514 ZNF124Q15973 351 aa13.41□□□□□ -0.26
CPSF4-205ENST00000440514 HAGHQ16775 308 aa13.41□□□□□ -0.26
CPSF4-205ENST00000440514 TEPPQ6URK8 271 aa13.41□□□□□ -0.26
CPSF4-205ENST00000440514 LINC00322Q6ZN03 302 aaPredicted RBP13.41□□□□□ -0.26
CPSF4-205ENST00000440514 CYP2G1PQ6ZSU1 146 aa13.41□□□□□ -0.26
CPSF4-205ENST00000440514 FAM24BQ8N5W8 94 aa13.41□□□□□ -0.26
CPSF4-205ENST00000440514 BPIFCQ8NFQ6 507 aa13.41□□□□□ -0.26
CPSF4-205ENST00000440514 MAP6D1Q9H9H5 199 aa13.41□□□□□ -0.26
CPSF4-205ENST00000440514 OR5AC2Q9NZP5 309 aa13.41□□□□□ -0.26
CPSF4-205ENST00000440514 SLC45A2Q9UMX9 530 aa13.41□□□□□ -0.26
CPSF4-205ENST00000440514 COL7A1Q02388 2944 aa13.4□□□□□ -0.26
CPSF4-205ENST00000440514 H0YIZ8 118 aa13.4□□□□□ -0.26
CPSF4-205ENST00000440514 APRG1Q8IVJ8 170 aa13.4□□□□□ -0.26
CPSF4-205ENST00000440514 TMEM252Q8N6L7 170 aa13.4□□□□□ -0.26
CPSF4-205ENST00000440514 PPP1R1CQ8WVI7 109 aa13.4□□□□□ -0.26
CPSF4-205ENST00000440514 TM2D3Q9BRN9 247 aa13.4□□□□□ -0.26
CPSF4-205ENST00000440514 HUWE1Q7Z6Z7 4374 aaKnown RBP13.4□□□□□ -0.26
CPSF4-205ENST00000440514 PXDC1Q5TGL8 231 aa13.39□□□□□ -0.27
CPSF4-205ENST00000440514 SIGLEC15Q6ZMC9 328 aa13.39□□□□□ -0.27
CPSF4-205ENST00000440514 PPP1R14BQ96C90 147 aa13.39□□□□□ -0.27
CPSF4-205ENST00000440514 DOK5Q9P104 306 aa13.39□□□□□ -0.27
CPSF4-205ENST00000440514 FBXL17Q9UF56 701 aa13.39□□□□□ -0.27
CPSF4-205ENST00000440514 U3KQK5 164 aa13.39□□□□□ -0.27
CPSF4-205ENST00000440514 TRAV2A0A0B4J234 112 aa13.38□□□□□ -0.27
CPSF4-205ENST00000440514 K7EQG2 157 aa13.38□□□□□ -0.27
CPSF4-205ENST00000440514 LINC00869P0C866 280 aa13.38□□□□□ -0.27
CPSF4-205ENST00000440514 ORM2P19652 201 aa13.38□□□□□ -0.27
CPSF4-205ENST00000440514 OR1B1Q8NGR6 318 aa13.38□□□□□ -0.27
CPSF4-205ENST00000440514 THAP6Q8TBB0 222 aa13.38□□□□□ -0.27
CPSF4-205ENST00000440514 DCANP1Q8TF63 244 aa13.38□□□□□ -0.27
CPSF4-205ENST00000440514 FAM110AQ9BQ89 295 aa13.38□□□□□ -0.27
CPSF4-205ENST00000440514 RETNQ9HD89 108 aa13.38□□□□□ -0.27
CPSF4-205ENST00000440514 UQCC1Q9NVA1 299 aa13.38□□□□□ -0.27
CPSF4-205ENST00000440514 MPDU1O75352 247 aa13.37□□□□□ -0.27
CPSF4-205ENST00000440514 MPC2O95563 127 aa13.37□□□□□ -0.27
CPSF4-205ENST00000440514 CXCL3P19876 107 aa13.37□□□□□ -0.27
CPSF4-205ENST00000440514 C1orf194Q5T5A4 169 aa13.37□□□□□ -0.27
CPSF4-205ENST00000440514 SAMD13Q5VXD3 122 aa13.37□□□□□ -0.27
CPSF4-205ENST00000440514 ZNF546Q86UE3 836 aa13.37□□□□□ -0.27
CPSF4-205ENST00000440514 RCHY1Q96PM5 261 aa13.37□□□□□ -0.27
CPSF4-205ENST00000440514 MGST2Q99735 147 aa13.37□□□□□ -0.27
CPSF4-205ENST00000440514 GGTLC1Q9BX51 225 aa13.37□□□□□ -0.27
CPSF4-205ENST00000440514 ZMAT4Q9H898 229 aa13.37□□□□□ -0.27
CPSF4-205ENST00000440514 LOC102724200A0A096LPH7 203 aaPredicted RBP13.36□□□□□ -0.27
CPSF4-205ENST00000440514 UBE2L5PA0A1B0GUS4 154 aa13.36□□□□□ -0.27
CPSF4-205ENST00000440514 AGPAT2O15120 278 aa13.36□□□□□ -0.27
CPSF4-205ENST00000440514 ZNF688P0C7X2 276 aa13.36□□□□□ -0.27
CPSF4-205ENST00000440514 DEFB131AP59861 70 aa13.36□□□□□ -0.27
CPSF4-205ENST00000440514 EWSR1Q01844 656 aaKnown RBP eCLIP13.36□□□□□ -0.27
CPSF4-205ENST00000440514 FCN2Q15485 313 aa13.36□□□□□ -0.27
CPSF4-205ENST00000440514 SPATA25Q9BR10 227 aa13.36□□□□□ -0.27
CPSF4-205ENST00000440514 TMEM147Q9BVK8 224 aa13.36□□□□□ -0.27
CPSF4-205ENST00000440514 RPL35AP18077 110 aaKnown RBP13.35□□□□□ -0.27
CPSF4-205ENST00000440514 NHLH2Q02577 135 aa13.35□□□□□ -0.27
CPSF4-205ENST00000440514 VWC2Q2TAL6 325 aa13.35□□□□□ -0.27
CPSF4-205ENST00000440514 LEMD1Q68G75 181 aa13.35□□□□□ -0.27
CPSF4-205ENST00000440514 OR11H7Q8NGC8 314 aa13.35□□□□□ -0.27
CPSF4-205ENST00000440514 GPR82Q96P67 336 aa13.35□□□□□ -0.27
CPSF4-205ENST00000440514 SCRT1Q9BWW7 348 aa13.35□□□□□ -0.27
CPSF4-205ENST00000440514 SLC25A32Q9H2D1 315 aa13.35□□□□□ -0.27
CPSF4-205ENST00000440514 SLC25A22Q9H936 323 aa13.35□□□□□ -0.27
CPSF4-205ENST00000440514 NRN1Q9NPD7 142 aa13.35□□□□□ -0.27
CPSF4-205ENST00000440514 WDR83OSQ9Y284 106 aa13.35□□□□□ -0.27
CPSF4-205ENST00000440514 H3BRN7 92 aa13.34□□□□□ -0.27
CPSF4-205ENST00000440514 GIPP09681 153 aaPredicted RBP13.34□□□□□ -0.27
CPSF4-205ENST00000440514 OR5G3P0C626 314 aa13.34□□□□□ -0.27
CPSF4-205ENST00000440514 RAP2BP61225 183 aa13.34□□□□□ -0.27
CPSF4-205ENST00000440514 Q6ZRG5 221 aa13.34□□□□□ -0.27
CPSF4-205ENST00000440514 RNF126Q9BV68 326 aa13.34□□□□□ -0.27
CPSF4-205ENST00000440514 KCNIP2Q9NS61 270 aa13.34□□□□□ -0.27
CPSF4-205ENST00000440514 MBD2Q9UBB5 411 aa13.34□□□□□ -0.27
CPSF4-205ENST00000440514 HIGD1AQ9Y241 93 aa13.34□□□□□ -0.27
CPSF4-205ENST00000440514 TENM3Q9P273 2699 aa13.34□□□□□ -0.27
CPSF4-205ENST00000440514 ZNF98A6NK75 572 aa13.33□□□□□ -0.28
CPSF4-205ENST00000440514 HYPMO75409 117 aa13.33□□□□□ -0.28
CPSF4-205ENST00000440514 CAMLGP49069 296 aa13.33□□□□□ -0.28
CPSF4-205ENST00000440514 PLP1P60201 277 aa13.33□□□□□ -0.28
CPSF4-205ENST00000440514 OR8I2Q8N0Y5 310 aa13.33□□□□□ -0.28
CPSF4-205ENST00000440514 OR5C1Q8NGR4 320 aa13.33□□□□□ -0.28
CPSF4-205ENST00000440514 CHAC2Q8WUX2 184 aa13.33□□□□□ -0.28
CPSF4-205ENST00000440514 UHRF2Q96PU4 802 aa13.33□□□□□ -0.28
CPSF4-205ENST00000440514 SLC25A39Q9BZJ4 359 aaPredicted RBP13.33□□□□□ -0.28
CPSF4-205ENST00000440514 ARL6Q9H0F7 186 aa13.33□□□□□ -0.28
CPSF4-205ENST00000440514 SEPSECSQ9HD40 501 aaKnown RBP13.33□□□□□ -0.28
CPSF4-205ENST00000440514 ELOA3CA0A087WX78 387 aaPredicted RBP13.32□□□□□ -0.28
CPSF4-205ENST00000440514 FGF7P21781 194 aa13.32□□□□□ -0.28
CPSF4-205ENST00000440514 PSMG4Q5JS54 123 aa13.32□□□□□ -0.28
CPSF4-205ENST00000440514 PATE2Q6UY27 113 aa13.32□□□□□ -0.28
CPSF4-205ENST00000440514 SHANK2-AS3Q9BTD1 123 aa13.32□□□□□ -0.28
CPSF4-205ENST00000440514 LYL1P12980 280 aa13.31□□□□□ -0.28
CPSF4-205ENST00000440514 RPL12P30050 165 aaKnown RBP13.31□□□□□ -0.28
CPSF4-205ENST00000440514 CLINT1Q14677 625 aa13.31□□□□□ -0.28
CPSF4-205ENST00000440514 MIC13Q5XKP0 118 aa13.31□□□□□ -0.28
CPSF4-205ENST00000440514 ARV1Q9H2C2 271 aa13.31□□□□□ -0.28
CPSF4-205ENST00000440514 KNCNA6PVL3 124 aa13.3□□□□□ -0.28
CPSF4-205ENST00000440514 MEOX2P50222 304 aa13.3□□□□□ -0.28
CPSF4-205ENST00000440514 APOC4P55056 127 aa13.3□□□□□ -0.28
CPSF4-205ENST00000440514 OPCMLQ14982 345 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms