RNA–Protein interactions for RNA: ENST00000439984.7

PCNX1-202, Transcript of pecanex 1, humanhuman

TSL 1 (best) BASIC

Gene PCNX1, Length 6,988 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-202ENST00000439984 EBLN2Q6P2I7 272 aa12.08□□□□□ -0.48
PCNX1-202ENST00000439984 LIME1Q9H400 295 aa12.08□□□□□ -0.48
PCNX1-202ENST00000439984 PPBPP02775 128 aa12.07□□□□□ -0.48
PCNX1-202ENST00000439984 PSG7Q13046 419 aa12.07□□□□□ -0.48
PCNX1-202ENST00000439984 LYPD6BQ8NI32 183 aa12.07□□□□□ -0.48
PCNX1-202ENST00000439984 HEATR1Q9H583 2144 aaKnown RBP12.07□□□□□ -0.48
PCNX1-202ENST00000439984 ATXN8Q156A1 80 aa12.07□□□□□ -0.48
PCNX1-202ENST00000439984 CD3EP07766 207 aa12.07□□□□□ -0.48
PCNX1-202ENST00000439984 PCOLCEQ15113 449 aa12.07□□□□□ -0.48
PCNX1-202ENST00000439984 SDK2Q58EX2 2172 aa12.07□□□□□ -0.48
PCNX1-202ENST00000439984 TRBV20-1A0A075B6N2 111 aa12.07□□□□□ -0.48
PCNX1-202ENST00000439984 TEX48A0A1B0GUV7 120 aa12.07□□□□□ -0.48
PCNX1-202ENST00000439984 COX6A1P12074 109 aa12.07□□□□□ -0.48
PCNX1-202ENST00000439984 IGKV2-40A0A087WW87 121 aaPredicted RBP12.06□□□□□ -0.48
PCNX1-202ENST00000439984 IGKV2D-40P01614 121 aaPredicted RBP12.06□□□□□ -0.48
PCNX1-202ENST00000439984 PRCDQ00LT1 54 aa12.06□□□□□ -0.48
PCNX1-202ENST00000439984 V9GYV3 84 aa12.06□□□□□ -0.48
PCNX1-202ENST00000439984 M0R2P5 195 aa12.06□□□□□ -0.48
PCNX1-202ENST00000439984 NKX2-8O15522 239 aa12.06□□□□□ -0.48
PCNX1-202ENST00000439984 MMP23AO75900 390 aa12.06□□□□□ -0.48
PCNX1-202ENST00000439984 ZNF318Q5VUA4 2279 aa12.06□□□□□ -0.48
PCNX1-202ENST00000439984 IFITM1P13164 125 aa12.06□□□□□ -0.48
PCNX1-202ENST00000439984 NPPCP23582 126 aa12.06□□□□□ -0.48
PCNX1-202ENST00000439984 RNASE4P34096 147 aaKnown RBP12.06□□□□□ -0.48
PCNX1-202ENST00000439984 RPL15P61313 204 aaKnown RBP12.06□□□□□ -0.48
PCNX1-202ENST00000439984 PNRC2Q9NPJ4 139 aaKnown RBP12.06□□□□□ -0.48
PCNX1-202ENST00000439984 PHF3Q92576 2039 aaKnown RBP12.06□□□□□ -0.48
PCNX1-202ENST00000439984 C10orf55Q5SWW7 151 aa12.06□□□□□ -0.48
PCNX1-202ENST00000439984 DENND4AQ7Z401 1863 aa12.06□□□□□ -0.48
PCNX1-202ENST00000439984 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.06□□□□□ -0.48
PCNX1-202ENST00000439984 TRAV21A0A0B4J279 112 aa12.06□□□□□ -0.48
PCNX1-202ENST00000439984 FOXF2Q12947 444 aa12.05□□□□□ -0.48
PCNX1-202ENST00000439984 MLANAQ16655 118 aa12.05□□□□□ -0.48
PCNX1-202ENST00000439984 TCF20Q9UGU0 1960 aaKnown RBP12.05□□□□□ -0.48
PCNX1-202ENST00000439984 E9PLN8 166 aa12.05□□□□□ -0.48
PCNX1-202ENST00000439984 CCDC144NLQ6NUI1 221 aa12.05□□□□□ -0.48
PCNX1-202ENST00000439984 C20orf204Q6ZNR8 217 aa12.05□□□□□ -0.48
PCNX1-202ENST00000439984 SLC25A45Q8N413 288 aa12.05□□□□□ -0.48
PCNX1-202ENST00000439984 DIDO1Q9BTC0 2240 aaKnown RBP12.05□□□□□ -0.48
PCNX1-202ENST00000439984 NPFFO15130 113 aa12.05□□□□□ -0.48
PCNX1-202ENST00000439984 EFNA2O43921 213 aa12.05□□□□□ -0.48
PCNX1-202ENST00000439984 ARMS2P0C7Q2 107 aa12.05□□□□□ -0.48
PCNX1-202ENST00000439984 CRYGSP22914 178 aa12.05□□□□□ -0.48
PCNX1-202ENST00000439984 PPP1R32Q7Z5V6 425 aa12.05□□□□□ -0.48
PCNX1-202ENST00000439984 TRAV8-3A0A0A6YYJ7 113 aa12.05□□□□□ -0.48
PCNX1-202ENST00000439984 LINC00473A8K010 186 aa12.05□□□□□ -0.48
PCNX1-202ENST00000439984 ORMDL2Q53FV1 153 aa12.05□□□□□ -0.48
PCNX1-202ENST00000439984 SH2D6Q7Z4S9 175 aa12.05□□□□□ -0.48
PCNX1-202ENST00000439984 WIPF3A6NGB9 483 aa12.04□□□□□ -0.48
PCNX1-202ENST00000439984 PATE3B3GLJ2 98 aa12.04□□□□□ -0.48
PCNX1-202ENST00000439984 CEACAM4O75871 244 aa12.04□□□□□ -0.48
PCNX1-202ENST00000439984 HEATR5AQ86XA9 2040 aa12.04□□□□□ -0.48
PCNX1-202ENST00000439984 PMS2P5A8MQ11 134 aa12.04□□□□□ -0.48
PCNX1-202ENST00000439984 CFHR2P36980 270 aa12.04□□□□□ -0.48
PCNX1-202ENST00000439984 RNF182Q8N6D2 247 aa12.04□□□□□ -0.48
PCNX1-202ENST00000439984 DEFB125Q8N687 156 aa12.04□□□□□ -0.48
PCNX1-202ENST00000439984 GLMPQ8WWB7 406 aa12.04□□□□□ -0.48
PCNX1-202ENST00000439984 PPDPFLQ8WWR9 84 aa12.04□□□□□ -0.48
PCNX1-202ENST00000439984 TOMM7Q9P0U1 55 aa12.04□□□□□ -0.48
PCNX1-202ENST00000439984 FLVCR1-AS1Q8TAF5 88 aa12.04□□□□□ -0.48
PCNX1-202ENST00000439984 TMEM8BA6NDV4 472 aa12.04□□□□□ -0.48
PCNX1-202ENST00000439984 YPEL1O60688 119 aa12.04□□□□□ -0.48
PCNX1-202ENST00000439984 PF4V1P10720 104 aa12.04□□□□□ -0.48
PCNX1-202ENST00000439984 ZNF329Q86UD4 541 aa12.04□□□□□ -0.48
PCNX1-202ENST00000439984 YPEL2Q96QA6 119 aa12.04□□□□□ -0.48
PCNX1-202ENST00000439984 ABHD17AQ96GS6 310 aa12.04□□□□□ -0.48
PCNX1-202ENST00000439984 RNF115Q9Y4L5 304 aa12.04□□□□□ -0.48
PCNX1-202ENST00000439984 PLNP26678 52 aa12.03□□□□□ -0.48
PCNX1-202ENST00000439984 MOB4Q9Y3A3 225 aa12.03□□□□□ -0.48
PCNX1-202ENST00000439984 SRSF7Q16629 238 aaKnown RBP eCLIP12.03□□□□□ -0.48
PCNX1-202ENST00000439984 MAFAQ8NHW3 353 aaPredicted RBP12.03□□□□□ -0.48
PCNX1-202ENST00000439984 CFPP27918 469 aa12.03□□□□□ -0.48
PCNX1-202ENST00000439984 SLC25A15Q9Y619 301 aa12.03□□□□□ -0.48
PCNX1-202ENST00000439984 COL4A6Q14031 1691 aa12.03□□□□□ -0.48
PCNX1-202ENST00000439984 C11orf68Q9H3H3 251 aaKnown RBP12.03□□□□□ -0.48
PCNX1-202ENST00000439984 LINC01549A6NIU2 74 aa12.02□□□□□ -0.48
PCNX1-202ENST00000439984 CCL3L1P16619 93 aa12.02□□□□□ -0.48
PCNX1-202ENST00000439984 GAGE5Q13069 117 aa12.02□□□□□ -0.48
PCNX1-202ENST00000439984 GAGE6Q13070 117 aa12.02□□□□□ -0.48
PCNX1-202ENST00000439984 COA6Q5JTJ3 125 aaKnown RBP12.02□□□□□ -0.48
PCNX1-202ENST00000439984 CITED2Q99967 270 aaPredicted RBP12.02□□□□□ -0.48
PCNX1-202ENST00000439984 ZNF562Q6V9R5 426 aa12.02□□□□□ -0.48
PCNX1-202ENST00000439984 NABP1Q96AH0 204 aa12.02□□□□□ -0.48
PCNX1-202ENST00000439984 RNF125Q96EQ8 232 aa12.02□□□□□ -0.48
PCNX1-202ENST00000439984 ZDBF2Q9HCK1 2354 aa12.02□□□□□ -0.48
PCNX1-202ENST00000439984 GFRA3O60609 400 aa12.02□□□□□ -0.49
PCNX1-202ENST00000439984 C8orf46Q8TAG6 207 aa12.02□□□□□ -0.49
PCNX1-202ENST00000439984 TNFRSF18Q9Y5U5 241 aa12.02□□□□□ -0.49
PCNX1-202ENST00000439984 TRAV26-1A0A087WT03 109 aa12.02□□□□□ -0.49
PCNX1-202ENST00000439984 PSPNO60542 156 aa12.02□□□□□ -0.49
PCNX1-202ENST00000439984 SPACA3Q8IXA5 215 aa12.02□□□□□ -0.49
PCNX1-202ENST00000439984 H7C1H1 209 aa12.01□□□□□ -0.49
PCNX1-202ENST00000439984 TMPRSS3P57727 454 aa12.01□□□□□ -0.49
PCNX1-202ENST00000439984 HS3ST6Q96QI5 342 aa12.01□□□□□ -0.49
PCNX1-202ENST00000439984 C21orf62Q9NYP8 219 aa12.01□□□□□ -0.49
PCNX1-202ENST00000439984 GAGE12JA6NER3 117 aa12.01□□□□□ -0.49
PCNX1-202ENST00000439984 GAGE7O76087 117 aa12.01□□□□□ -0.49
PCNX1-202ENST00000439984 GAGE12FP0CL80 117 aa12.01□□□□□ -0.49
PCNX1-202ENST00000439984 GAGE12GP0CL81 117 aa12.01□□□□□ -0.49
PCNX1-202ENST00000439984 GAGE12IP0CL82 117 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms