RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 EPDR1Q9UM22 224 aa9.21□□□□□ -0.93
SMAD3-202ENST00000439724 RNF24Q9Y225 148 aa9.21□□□□□ -0.93
SMAD3-202ENST00000439724 PGPA6NDG6 321 aa9.21□□□□□ -0.94
SMAD3-202ENST00000439724 HIST1H2BKO60814 126 aa9.21□□□□□ -0.94
SMAD3-202ENST00000439724 AMY1AP04745 511 aa9.21□□□□□ -0.94
SMAD3-202ENST00000439724 SLC25A5P05141 298 aaKnown RBP9.21□□□□□ -0.94
SMAD3-202ENST00000439724 HIST1H2BJP06899 126 aa9.21□□□□□ -0.94
SMAD3-202ENST00000439724 HIST1H2BOP23527 126 aa9.21□□□□□ -0.94
SMAD3-202ENST00000439724 HIST1H2BBP33778 126 aa9.21□□□□□ -0.94
SMAD3-202ENST00000439724 HIST1H2BDP58876 126 aa9.21□□□□□ -0.94
SMAD3-202ENST00000439724 HIST1H2BCP62807 126 aa9.21□□□□□ -0.94
SMAD3-202ENST00000439724 USF2Q15853 346 aaPredicted RBP9.21□□□□□ -0.94
SMAD3-202ENST00000439724 HIST2H2BEQ16778 126 aa9.21□□□□□ -0.94
SMAD3-202ENST00000439724 TMEM183BQ1AE95 376 aa9.21□□□□□ -0.94
SMAD3-202ENST00000439724 C19orf54Q5BKX5 351 aa9.21□□□□□ -0.94
SMAD3-202ENST00000439724 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.21□□□□□ -0.94
SMAD3-202ENST00000439724 TMEM219Q86XT9 240 aa9.21□□□□□ -0.94
SMAD3-202ENST00000439724 BPIFA4PQ86YQ2 179 aa9.21□□□□□ -0.94
SMAD3-202ENST00000439724 LINC01356Q8N9X3 169 aa9.21□□□□□ -0.94
SMAD3-202ENST00000439724 ZNF502Q8TBZ5 544 aa9.21□□□□□ -0.94
SMAD3-202ENST00000439724 HIST1H2BHQ93079 126 aa9.21□□□□□ -0.94
SMAD3-202ENST00000439724 HIST1H2BNQ99877 126 aa9.21□□□□□ -0.94
SMAD3-202ENST00000439724 HIST1H2BMQ99879 126 aa9.21□□□□□ -0.94
SMAD3-202ENST00000439724 Q9H3A6 140 aa9.21□□□□□ -0.94
SMAD3-202ENST00000439724 BEX4Q9NWD9 120 aaPredicted RBP9.21□□□□□ -0.94
SMAD3-202ENST00000439724 ZNF586Q9NXT0 402 aa9.21□□□□□ -0.94
SMAD3-202ENST00000439724 IL36BQ9NZH7 164 aa9.21□□□□□ -0.94
SMAD3-202ENST00000439724 KLF12Q9Y4X4 402 aa9.21□□□□□ -0.94
SMAD3-202ENST00000439724 ZNF462Q96JM2 2506 aa9.2□□□□□ -0.94
SMAD3-202ENST00000439724 A6NDX4 124 aa9.2□□□□□ -0.94
SMAD3-202ENST00000439724 LINC01548A6NM66 108 aa9.2□□□□□ -0.94
SMAD3-202ENST00000439724 ISLRO14498 428 aa9.2□□□□□ -0.94
SMAD3-202ENST00000439724 MRPS12O15235 138 aaKnown RBP9.2□□□□□ -0.94
SMAD3-202ENST00000439724 S100A9P06702 114 aaKnown RBP9.2□□□□□ -0.94
SMAD3-202ENST00000439724 CTSGP08311 255 aa9.2□□□□□ -0.94
SMAD3-202ENST00000439724 IGLC2P0DOY2 106 aa9.2□□□□□ -0.94
SMAD3-202ENST00000439724 RHOGP84095 191 aa9.2□□□□□ -0.94
SMAD3-202ENST00000439724 FABP9Q0Z7S8 132 aa9.2□□□□□ -0.94
SMAD3-202ENST00000439724 OR4F17Q8NGA8 305 aa9.2□□□□□ -0.94
SMAD3-202ENST00000439724 FRZBQ92765 325 aa9.2□□□□□ -0.94
SMAD3-202ENST00000439724 SMIM12Q96EX1 92 aa9.2□□□□□ -0.94
SMAD3-202ENST00000439724 ATG101Q9BSB4 218 aa9.2□□□□□ -0.94
SMAD3-202ENST00000439724 OTORQ9NRC9 128 aa9.2□□□□□ -0.94
SMAD3-202ENST00000439724 GAR1Q9NY12 217 aaKnown RBP9.2□□□□□ -0.94
SMAD3-202ENST00000439724 V9GYV3 84 aa9.2□□□□□ -0.94
SMAD3-202ENST00000439724 ZNF98A6NK75 572 aa9.19□□□□□ -0.94
SMAD3-202ENST00000439724 SH2D7A6NKC9 451 aaPredicted RBP9.19□□□□□ -0.94
SMAD3-202ENST00000439724 G3V318 75 aa9.19□□□□□ -0.94
SMAD3-202ENST00000439724 J3QLI3 93 aa9.19□□□□□ -0.94
SMAD3-202ENST00000439724 AVPP01185 164 aa9.19□□□□□ -0.94
SMAD3-202ENST00000439724 SNRPCP09234 159 aaKnown RBP9.19□□□□□ -0.94
SMAD3-202ENST00000439724 ADMP35318 185 aa9.19□□□□□ -0.94
SMAD3-202ENST00000439724 ERVFC1-1P60608 527 aa9.19□□□□□ -0.94
SMAD3-202ENST00000439724 GNG5P63218 68 aa9.19□□□□□ -0.94
SMAD3-202ENST00000439724 LOXL1Q08397 574 aaPredicted RBP9.19□□□□□ -0.94
SMAD3-202ENST00000439724 OR5I1Q13606 314 aa9.19□□□□□ -0.94
SMAD3-202ENST00000439724 C15orf32Q32M92 178 aa9.19□□□□□ -0.94
SMAD3-202ENST00000439724 LRRC75A-AS1Q8N1F1 130 aa9.19□□□□□ -0.94
SMAD3-202ENST00000439724 TRBV19A0A075B6N1 114 aa9.18□□□□□ -0.94
SMAD3-202ENST00000439724 TRAV41A0A0B4J266 112 aa9.18□□□□□ -0.94
SMAD3-202ENST00000439724 OR2T8A6NH00 312 aa9.18□□□□□ -0.94
SMAD3-202ENST00000439724 M0QZK8 103 aa9.18□□□□□ -0.94
SMAD3-202ENST00000439724 IGHV3-23P01764 117 aa9.18□□□□□ -0.94
SMAD3-202ENST00000439724 TCRAP04437 139 aa9.18□□□□□ -0.94
SMAD3-202ENST00000439724 TRGC1P0CF51 173 aa9.18□□□□□ -0.94
SMAD3-202ENST00000439724 AKR1D1P51857 326 aa9.18□□□□□ -0.94
SMAD3-202ENST00000439724 UBE2G1P62253 170 aa9.18□□□□□ -0.94
SMAD3-202ENST00000439724 RPEL1Q2QD12 228 aa9.18□□□□□ -0.94
SMAD3-202ENST00000439724 ACTL10Q5JWF8 245 aa9.18□□□□□ -0.94
SMAD3-202ENST00000439724 BAGE2Q86Y30 109 aa9.18□□□□□ -0.94
SMAD3-202ENST00000439724 LYPD1Q8N2G4 141 aa9.18□□□□□ -0.94
SMAD3-202ENST00000439724 FMC1Q96HJ9 113 aa9.18□□□□□ -0.94
SMAD3-202ENST00000439724 LINC00479Q96M42 142 aa9.18□□□□□ -0.94
SMAD3-202ENST00000439724 ATP6V0BQ99437 205 aa9.18□□□□□ -0.94
SMAD3-202ENST00000439724 CHRDL1Q9BU40 450 aa9.18□□□□□ -0.94
SMAD3-202ENST00000439724 ZFYVE26Q68DK2 2539 aa9.18□□□□□ -0.94
SMAD3-202ENST00000439724 TRAV34A0A0B4J273 112 aa9.17□□□□□ -0.94
SMAD3-202ENST00000439724 ZNF320A2RRD8 509 aa9.17□□□□□ -0.94
SMAD3-202ENST00000439724 H3BTX0 84 aa9.17□□□□□ -0.94
SMAD3-202ENST00000439724 H3BUX3 64 aa9.17□□□□□ -0.94
SMAD3-202ENST00000439724 SLC17A3O00476 420 aa9.17□□□□□ -0.94
SMAD3-202ENST00000439724 IGF1P05019 195 aa9.17□□□□□ -0.94
SMAD3-202ENST00000439724 MGST1P10620 155 aaKnown RBP9.17□□□□□ -0.94
SMAD3-202ENST00000439724 HOXA5P20719 270 aa9.17□□□□□ -0.94
SMAD3-202ENST00000439724 S100A7P31151 101 aa9.17□□□□□ -0.94
SMAD3-202ENST00000439724 NDUFA6P56556 154 aa9.17□□□□□ -0.94
SMAD3-202ENST00000439724 KRTAP10-9P60411 292 aa9.17□□□□□ -0.94
SMAD3-202ENST00000439724 FAM231DQ6ZW35 169 aa9.17□□□□□ -0.94
SMAD3-202ENST00000439724 EEF1AKMT3Q96AZ1 226 aa9.17□□□□□ -0.94
SMAD3-202ENST00000439724 ZNF414Q96IQ9 312 aa9.17□□□□□ -0.94
SMAD3-202ENST00000439724 CCDC140Q96MF4 163 aa9.17□□□□□ -0.94
SMAD3-202ENST00000439724 PITPNC1Q9UKF7 332 aa9.17□□□□□ -0.94
SMAD3-202ENST00000439724 SOX21Q9Y651 276 aaPredicted RBP9.17□□□□□ -0.94
SMAD3-202ENST00000439724 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.17□□□□□ -0.943e-7■■■□□ 16.9
SMAD3-202ENST00000439724 TRBV7-1A0A0A6YYK4 115 aa9.16□□□□□ -0.94
SMAD3-202ENST00000439724 TRBV6-1A0A0K0K1D8 114 aa9.16□□□□□ -0.94
SMAD3-202ENST00000439724 FAM223BA6NKX1 122 aa9.16□□□□□ -0.94
SMAD3-202ENST00000439724 BRI3O95415 125 aa9.16□□□□□ -0.94
SMAD3-202ENST00000439724 IGHG2P01859 326 aa9.16□□□□□ -0.94
SMAD3-202ENST00000439724 S100A8P05109 93 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms