RNA–Protein interactions for RNA: ENST00000439369.6

SCLT1-202, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-202ENST00000439369 SIGLEC8Q9NYZ4 499 aa9.69□□□□□ -0.86
SCLT1-202ENST00000439369 HIGD1AQ9Y241 93 aa9.69□□□□□ -0.86
SCLT1-202ENST00000439369 BOLA1Q9Y3E2 137 aa9.69□□□□□ -0.86
SCLT1-202ENST00000439369 FBN1P35555 2871 aaKnown RBP9.69□□□□□ -0.86
SCLT1-202ENST00000439369 A0A1W2PS18 150 aa9.68□□□□□ -0.86
SCLT1-202ENST00000439369 OVOL1O14753 267 aa9.68□□□□□ -0.86
SCLT1-202ENST00000439369 ORM2P19652 201 aa9.68□□□□□ -0.86
SCLT1-202ENST00000439369 RAB5CP51148 216 aa9.68□□□□□ -0.86
SCLT1-202ENST00000439369 TMEM41BQ5BJD5 291 aa9.68□□□□□ -0.86
SCLT1-202ENST00000439369 C1orf194Q5T5A4 169 aa9.68□□□□□ -0.86
SCLT1-202ENST00000439369 C10orf113Q5VZT2 155 aa9.68□□□□□ -0.86
SCLT1-202ENST00000439369 DPPA3Q6W0C5 159 aa9.68□□□□□ -0.86
SCLT1-202ENST00000439369 LINC00482Q8N8I6 264 aa9.68□□□□□ -0.86
SCLT1-202ENST00000439369 OR1B1Q8NGR6 318 aa9.68□□□□□ -0.86
SCLT1-202ENST00000439369 DLX4Q92988 240 aaPredicted RBP9.68□□□□□ -0.86
SCLT1-202ENST00000439369 DUX3Q96PT4 197 aa9.68□□□□□ -0.86
SCLT1-202ENST00000439369 C20orf24Q9BUV8 137 aa9.68□□□□□ -0.86
SCLT1-202ENST00000439369 PBDC1Q9BVG4 233 aa9.68□□□□□ -0.86
SCLT1-202ENST00000439369 MRPL32Q9BYC8 188 aaKnown RBP9.68□□□□□ -0.86
SCLT1-202ENST00000439369 TMEM231Q9H6L2 316 aa9.68□□□□□ -0.86
SCLT1-202ENST00000439369 U3KQE9 123 aa9.68□□□□□ -0.86
SCLT1-202ENST00000439369 IGHV7-4-1A0A0J9YVY3 117 aa9.67□□□□□ -0.86
SCLT1-202ENST00000439369 TMEM213A2RRL7 107 aa9.67□□□□□ -0.86
SCLT1-202ENST00000439369 CD5P06127 495 aa9.67□□□□□ -0.86
SCLT1-202ENST00000439369 OR5G3P0C626 314 aa9.67□□□□□ -0.86
SCLT1-202ENST00000439369 C8orf88P0DMB2 117 aa9.67□□□□□ -0.86
SCLT1-202ENST00000439369 RHOBP62745 196 aa9.67□□□□□ -0.86
SCLT1-202ENST00000439369 AKR1C8PQ5T2L2 129 aa9.67□□□□□ -0.86
SCLT1-202ENST00000439369 PATE2Q6UY27 113 aa9.67□□□□□ -0.86
SCLT1-202ENST00000439369 TMED6Q8WW62 240 aa9.67□□□□□ -0.86
SCLT1-202ENST00000439369 GRAMD2BQ96HH9 432 aa9.67□□□□□ -0.86
SCLT1-202ENST00000439369 SHANK2-AS3Q9BTD1 123 aa9.67□□□□□ -0.86
SCLT1-202ENST00000439369 ELOVL1Q9BW60 279 aa9.67□□□□□ -0.86
SCLT1-202ENST00000439369 C2orf70A6NJV1 201 aa9.66□□□□□ -0.86
SCLT1-202ENST00000439369 SEC14L6B5MCN3 397 aa9.66□□□□□ -0.86
SCLT1-202ENST00000439369 H3BRN7 92 aa9.66□□□□□ -0.86
SCLT1-202ENST00000439369 WFDC9Q8NEX5 89 aa9.66□□□□□ -0.86
SCLT1-202ENST00000439369 OR10G4Q8NGN3 311 aa9.66□□□□□ -0.86
SCLT1-202ENST00000439369 OR10G9Q8NGN4 311 aa9.66□□□□□ -0.86
SCLT1-202ENST00000439369 OR10G7Q8NGN6 311 aa9.66□□□□□ -0.86
SCLT1-202ENST00000439369 SPATA3Q8NHX4 192 aa9.66□□□□□ -0.86
SCLT1-202ENST00000439369 TMEM37Q8WXS4 190 aa9.66□□□□□ -0.86
SCLT1-202ENST00000439369 GPR82Q96P67 336 aa9.66□□□□□ -0.86
SCLT1-202ENST00000439369 SLC25A39Q9BZJ4 359 aaPredicted RBP9.66□□□□□ -0.86
SCLT1-202ENST00000439369 TECRQ9NZ01 308 aaKnown RBP9.66□□□□□ -0.86
SCLT1-202ENST00000439369 DOK5Q9P104 306 aa9.66□□□□□ -0.86
SCLT1-202ENST00000439369 SMPXQ9UHP9 88 aa9.66□□□□□ -0.86
SCLT1-202ENST00000439369 CBLN1P23435 193 aa9.65□□□□□ -0.86
SCLT1-202ENST00000439369 SULT1A2P50226 295 aa9.65□□□□□ -0.86
SCLT1-202ENST00000439369 RAB2AP61019 212 aa9.65□□□□□ -0.86
SCLT1-202ENST00000439369 TM4SF20Q53R12 229 aa9.65□□□□□ -0.86
SCLT1-202ENST00000439369 LINC00305Q7Z4B0 112 aa9.65□□□□□ -0.86
SCLT1-202ENST00000439369 STXBP6Q8NFX7 210 aa9.65□□□□□ -0.86
SCLT1-202ENST00000439369 MCRIP2Q9BUT9 160 aaKnown RBP9.65□□□□□ -0.86
SCLT1-202ENST00000439369 ACTR3CQ9C0K3 210 aaPredicted RBP9.65□□□□□ -0.86
SCLT1-202ENST00000439369 VSIRQ9H7M9 311 aa9.65□□□□□ -0.86
SCLT1-202ENST00000439369 RPRMQ9NS64 109 aa9.65□□□□□ -0.86
SCLT1-202ENST00000439369 FUT9Q9Y231 359 aa9.65□□□□□ -0.86
SCLT1-202ENST00000439369 RFNGQ9Y644 331 aa9.65□□□□□ -0.86
SCLT1-202ENST00000439369 A0A1W2PPV4 95 aa9.64□□□□□ -0.87
SCLT1-202ENST00000439369 ZNF98A6NK75 572 aa9.64□□□□□ -0.87
SCLT1-202ENST00000439369 BUB3O43684 328 aa9.64□□□□□ -0.87
SCLT1-202ENST00000439369 IFNA7P01567 189 aa9.64□□□□□ -0.87
SCLT1-202ENST00000439369 CSN3P07498 182 aa9.64□□□□□ -0.87
SCLT1-202ENST00000439369 FOLR2P14207 255 aa9.64□□□□□ -0.87
SCLT1-202ENST00000439369 INSL3P51460 131 aa9.64□□□□□ -0.87
SCLT1-202ENST00000439369 TAS2R45P59539 299 aa9.64□□□□□ -0.87
SCLT1-202ENST00000439369 GCSAMLQ5JQS6 135 aa9.64□□□□□ -0.87
SCLT1-202ENST00000439369 FAM78BQ5VT40 261 aa9.64□□□□□ -0.87
SCLT1-202ENST00000439369 TEX261Q6UWH6 196 aa9.64□□□□□ -0.87
SCLT1-202ENST00000439369 IL34Q6ZMJ4 242 aa9.64□□□□□ -0.87
SCLT1-202ENST00000439369 RPP25LQ8N5L8 163 aaKnown RBP9.64□□□□□ -0.87
SCLT1-202ENST00000439369 LRRC20Q8TCA0 184 aa9.64□□□□□ -0.87
SCLT1-202ENST00000439369 IGHV3OR16-8A0A075B7F1 116 aa9.63□□□□□ -0.87
SCLT1-202ENST00000439369 CTXND1A0A1B0GTU2 59 aa9.63□□□□□ -0.87
SCLT1-202ENST00000439369 HELTA6NFD8 242 aa9.63□□□□□ -0.87
SCLT1-202ENST00000439369 CHEK1O14757 476 aa9.63□□□□□ -0.87
SCLT1-202ENST00000439369 ZNF207O43670 478 aaKnown RBP9.63□□□□□ -0.87
SCLT1-202ENST00000439369 RPL7P18124 248 aaKnown RBP9.63□□□□□ -0.87
SCLT1-202ENST00000439369 CDC34P49427 236 aaPredicted RBP9.63□□□□□ -0.87
SCLT1-202ENST00000439369 C16orf54Q6UWD8 224 aa9.63□□□□□ -0.87
SCLT1-202ENST00000439369 ZNF680Q8NEM1 530 aa9.63□□□□□ -0.87
SCLT1-202ENST00000439369 OR2K2Q8NGT1 345 aa9.63□□□□□ -0.87
SCLT1-202ENST00000439369 RNF141Q8WVD5 230 aa9.63□□□□□ -0.87
SCLT1-202ENST00000439369 UHRF2Q96PU4 802 aa9.63□□□□□ -0.87
SCLT1-202ENST00000439369 RHPN1-AS1Q9BWJ2 59 aa9.63□□□□□ -0.87
SCLT1-202ENST00000439369 GPR61Q9BZJ8 451 aa9.63□□□□□ -0.87
SCLT1-202ENST00000439369 SEPSECSQ9HD40 501 aaKnown RBP9.63□□□□□ -0.87
SCLT1-202ENST00000439369 TMEM14CQ9P0S9 112 aa9.63□□□□□ -0.87
SCLT1-202ENST00000439369 COL6A5A8TX70 2615 aa9.62□□□□□ -0.87
SCLT1-202ENST00000439369 MEOX2P50222 304 aa9.62□□□□□ -0.87
SCLT1-202ENST00000439369 KHDC3LQ587J8 217 aa9.62□□□□□ -0.87
SCLT1-202ENST00000439369 FAM122CQ6P4D5 195 aa9.62□□□□□ -0.87
SCLT1-202ENST00000439369 ALKAL2Q6UX46 152 aa9.62□□□□□ -0.87
SCLT1-202ENST00000439369 PQLC2Q6ZP29 291 aa9.62□□□□□ -0.87
SCLT1-202ENST00000439369 BPIFA4PQ86YQ2 179 aa9.62□□□□□ -0.87
SCLT1-202ENST00000439369 GLMPQ8WWB7 406 aa9.62□□□□□ -0.87
SCLT1-202ENST00000439369 RAB24Q969Q5 203 aa9.62□□□□□ -0.87
SCLT1-202ENST00000439369 SCRT1Q9BWW7 348 aa9.62□□□□□ -0.87
SCLT1-202ENST00000439369 TENM1Q9UKZ4 2725 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms