RNA–Protein interactions for RNA: ENST00000439247.2

PCNX3-202, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 3,104 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-202ENST00000439247 CIARTQ8N365 385 aaPredicted RBP10.89□□□□□ -0.67
PCNX3-202ENST00000439247 OR1L8Q8NGR8 309 aa10.89□□□□□ -0.67
PCNX3-202ENST00000439247 HARBI1Q96MB7 349 aa10.89□□□□□ -0.67
PCNX3-202ENST00000439247 TMEM191AQ9H0A3 160 aa10.89□□□□□ -0.67
PCNX3-202ENST00000439247 TLN1Q9Y490 2541 aaKnown RBP10.89□□□□□ -0.67
PCNX3-202ENST00000439247 ITPR1Q14643 2758 aa10.89□□□□□ -0.67
PCNX3-202ENST00000439247 CGB1A6NKQ9 187 aa10.89□□□□□ -0.67
PCNX3-202ENST00000439247 FAM106CPP0CH98 169 aa10.89□□□□□ -0.67
PCNX3-202ENST00000439247 FXYD7P58549 80 aa10.89□□□□□ -0.67
PCNX3-202ENST00000439247 POU2AF1Q16633 256 aa10.89□□□□□ -0.67
PCNX3-202ENST00000439247 FAM106AQ4KMX7 169 aa10.89□□□□□ -0.67
PCNX3-202ENST00000439247 C2orf91Q6ZV80 131 aa10.89□□□□□ -0.67
PCNX3-202ENST00000439247 PDPNQ86YL7 162 aa10.89□□□□□ -0.67
PCNX3-202ENST00000439247 RBMXL3Q8N7X1 1067 aaKnown RBP10.89□□□□□ -0.67
PCNX3-202ENST00000439247 TMEM178AQ8NBL3 297 aa10.89□□□□□ -0.67
PCNX3-202ENST00000439247 CSTL1Q9H114 145 aa10.89□□□□□ -0.67
PCNX3-202ENST00000439247 P01737 135 aa10.88□□□□□ -0.67
PCNX3-202ENST00000439247 APOA2P02652 100 aa10.88□□□□□ -0.67
PCNX3-202ENST00000439247 ARF6P62330 175 aa10.88□□□□□ -0.67
PCNX3-202ENST00000439247 ZNF714Q96N38 554 aa10.88□□□□□ -0.67
PCNX3-202ENST00000439247 NDUFA4L2Q9NRX3 87 aa10.88□□□□□ -0.67
PCNX3-202ENST00000439247 C7orf71A4D174 169 aa10.88□□□□□ -0.67
PCNX3-202ENST00000439247 FAM87AP0C7U9 286 aa10.88□□□□□ -0.67
PCNX3-202ENST00000439247 GPR183P32249 361 aa10.88□□□□□ -0.67
PCNX3-202ENST00000439247 MYCNOSP40205 109 aa10.88□□□□□ -0.67
PCNX3-202ENST00000439247 C12orf54Q6X4T0 127 aa10.88□□□□□ -0.67
PCNX3-202ENST00000439247 MAP1LC3CQ9BXW4 147 aa10.88□□□□□ -0.67
PCNX3-202ENST00000439247 TPSG1Q9NRR2 321 aa10.88□□□□□ -0.67
PCNX3-202ENST00000439247 ATRXP46100 2492 aa10.87□□□□□ -0.67
PCNX3-202ENST00000439247 CHEK1O14757 476 aa10.87□□□□□ -0.67
PCNX3-202ENST00000439247 MBNL2Q5VZF2 373 aaKnown RBP10.87□□□□□ -0.67
PCNX3-202ENST00000439247 HCP5Q6MZN7 132 aa10.87□□□□□ -0.67
PCNX3-202ENST00000439247 SMIM15Q7Z3B0 74 aa10.87□□□□□ -0.67
PCNX3-202ENST00000439247 ATP5L2Q7Z4Y8 100 aa10.87□□□□□ -0.67
PCNX3-202ENST00000439247 FLYWCH2Q96CP2 140 aaKnown RBP10.87□□□□□ -0.67
PCNX3-202ENST00000439247 GPR82Q96P67 336 aa10.87□□□□□ -0.67
PCNX3-202ENST00000439247 MLST8Q9BVC4 326 aa10.87□□□□□ -0.67
PCNX3-202ENST00000439247 FAM231BA6NCW3 169 aa10.87□□□□□ -0.67
PCNX3-202ENST00000439247 C22orf46C9J442 243 aa10.87□□□□□ -0.67
PCNX3-202ENST00000439247 ABHD17AQ96GS6 310 aa10.87□□□□□ -0.67
PCNX3-202ENST00000439247 ZNF430Q9H8G1 570 aaPredicted RBP10.87□□□□□ -0.67
PCNX3-202ENST00000439247 HILPDAQ9Y5L2 63 aa10.87□□□□□ -0.67
PCNX3-202ENST00000439247 TCRBV4S1A1TA0A5B7 111 aa10.87□□□□□ -0.67
PCNX3-202ENST00000439247 ERHP84090 104 aaKnown RBP10.87□□□□□ -0.67
PCNX3-202ENST00000439247 CHCHD1Q96BP2 118 aaKnown RBP10.87□□□□□ -0.67
PCNX3-202ENST00000439247 TRAV17A0A0B4J275 112 aa10.86□□□□□ -0.67
PCNX3-202ENST00000439247 CD5LO43866 347 aa10.86□□□□□ -0.67
PCNX3-202ENST00000439247 H1FXQ92522 213 aaKnown RBP10.86□□□□□ -0.67
PCNX3-202ENST00000439247 RITA1Q96K30 269 aa10.86□□□□□ -0.67
PCNX3-202ENST00000439247 JMJD8Q96S16 334 aa10.86□□□□□ -0.67
PCNX3-202ENST00000439247 PRSS22Q9GZN4 317 aa10.86□□□□□ -0.67
PCNX3-202ENST00000439247 A8MWL6 223 aa10.86□□□□□ -0.67
PCNX3-202ENST00000439247 K7ENP7 123 aa10.86□□□□□ -0.67
PCNX3-202ENST00000439247 NBEAP1P0C6P0 100 aa10.86□□□□□ -0.67
PCNX3-202ENST00000439247 CCL3L1P16619 93 aa10.86□□□□□ -0.67
PCNX3-202ENST00000439247 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.86□□□□□ -0.67
PCNX3-202ENST00000439247 ADTRPQ96IZ2 230 aa10.86□□□□□ -0.67
PCNX3-202ENST00000439247 CHRDL1Q9BU40 450 aa10.86□□□□□ -0.67
PCNX3-202ENST00000439247 ZNF71Q9NQZ8 489 aaPredicted RBP10.86□□□□□ -0.67
PCNX3-202ENST00000439247 M0R1B8 84 aa10.85□□□□□ -0.67
PCNX3-202ENST00000439247 LHBP01229 141 aa10.85□□□□□ -0.67
PCNX3-202ENST00000439247 HIST1H1AQ02539 215 aaPredicted RBP10.85□□□□□ -0.67
PCNX3-202ENST00000439247 LOXL1Q08397 574 aaPredicted RBP10.85□□□□□ -0.67
PCNX3-202ENST00000439247 ZADH2Q8N4Q0 377 aa10.85□□□□□ -0.67
PCNX3-202ENST00000439247 hADV38S2A0JD32 116 aa10.85□□□□□ -0.67
PCNX3-202ENST00000439247 C19orf71A6NCJ1 209 aa10.85□□□□□ -0.67
PCNX3-202ENST00000439247 LIPFP07098 398 aa10.85□□□□□ -0.67
PCNX3-202ENST00000439247 IGLC1P0CG04 106 aa10.85□□□□□ -0.67
PCNX3-202ENST00000439247 SLC25A48Q6ZT89 311 aaKnown RBP10.85□□□□□ -0.67
PCNX3-202ENST00000439247 OR1L4Q8NGR5 311 aa10.85□□□□□ -0.67
PCNX3-202ENST00000439247 NEU4Q8WWR8 484 aaPredicted RBP10.85□□□□□ -0.67
PCNX3-202ENST00000439247 TPPP3Q9BW30 176 aa10.85□□□□□ -0.67
PCNX3-202ENST00000439247 IGLV1-44P01699 117 aa10.84□□□□□ -0.67
PCNX3-202ENST00000439247 APOHP02749 345 aaPredicted RBP10.84□□□□□ -0.67
PCNX3-202ENST00000439247 RBPMS2Q6ZRY4 209 aaKnown RBP10.84□□□□□ -0.67
PCNX3-202ENST00000439247 BHLHA15Q7RTS1 189 aaPredicted RBP10.84□□□□□ -0.67
PCNX3-202ENST00000439247 EXOC3-AS1Q8N2X6 119 aa10.84□□□□□ -0.67
PCNX3-202ENST00000439247 CACNG8Q8WXS5 425 aa10.84□□□□□ -0.67
PCNX3-202ENST00000439247 RAB37Q96AX2 223 aa10.84□□□□□ -0.67
PCNX3-202ENST00000439247 DAZAP1Q96EP5 407 aaKnown RBP10.84□□□□□ -0.67
PCNX3-202ENST00000439247 GAFA1Q96PS6 74 aa10.84□□□□□ -0.67
PCNX3-202ENST00000439247 C1RLQ9NZP8 487 aa10.84□□□□□ -0.67
PCNX3-202ENST00000439247 TPRP12270 2363 aaKnown RBP10.84□□□□□ -0.67
PCNX3-202ENST00000439247 HLA-DRB1P01911 266 aa10.84□□□□□ -0.67
PCNX3-202ENST00000439247 HTR1DP28221 377 aa10.84□□□□□ -0.67
PCNX3-202ENST00000439247 PRB3Q04118 309 aaPredicted RBP10.84□□□□□ -0.67
PCNX3-202ENST00000439247 IGHV3-72A0A0B4J1Y9 119 aa10.84□□□□□ -0.67
PCNX3-202ENST00000439247 LOC389332A0A1B0GUA5 103 aa10.84□□□□□ -0.67
PCNX3-202ENST00000439247 GAGE10A6NGK3 116 aa10.84□□□□□ -0.67
PCNX3-202ENST00000439247 OR5AL1P0C617 328 aa10.84□□□□□ -0.67
PCNX3-202ENST00000439247 ARMS2P0C7Q2 107 aa10.84□□□□□ -0.67
PCNX3-202ENST00000439247 COL8A1P27658 744 aa10.84□□□□□ -0.67
PCNX3-202ENST00000439247 FAM71F2Q6NXP2 309 aa10.84□□□□□ -0.67
PCNX3-202ENST00000439247 PRNTQ86SH4 94 aa10.84□□□□□ -0.67
PCNX3-202ENST00000439247 ZCCHC24Q8N2G6 241 aaKnown RBP10.84□□□□□ -0.67
PCNX3-202ENST00000439247 Q9H3A6 140 aa10.84□□□□□ -0.67
PCNX3-202ENST00000439247 RPUSD1Q9UJJ7 312 aaKnown RBP10.84□□□□□ -0.67
PCNX3-202ENST00000439247 LTAP01374 205 aa10.83□□□□□ -0.68
PCNX3-202ENST00000439247 GUSBP1Q15486 140 aa10.83□□□□□ -0.68
PCNX3-202ENST00000439247 PET117Q6UWS5 81 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms