RNA–Protein interactions for RNA: ENST00000438581.6

TMEM39A-202, Transcript of transmembrane protein 39A, humanhuman

TSL 1 (best)

Gene TMEM39A, Length 4,393 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-202ENST00000438581 A0A0G2JRQ6 117 aa6.64□□□□□ -1.35
TMEM39A-202ENST00000438581 GAGE12JA6NER3 117 aa6.64□□□□□ -1.35
TMEM39A-202ENST00000438581 C15orf61A6NNL5 157 aa6.64□□□□□ -1.35
TMEM39A-202ENST00000438581 F5H768 121 aa6.64□□□□□ -1.35
TMEM39A-202ENST00000438581 M0QXV9 152 aa6.64□□□□□ -1.35
TMEM39A-202ENST00000438581 NBR2O15453 112 aa6.64□□□□□ -1.35
TMEM39A-202ENST00000438581 GAGE7O76087 117 aa6.64□□□□□ -1.35
TMEM39A-202ENST00000438581 GAGE12FP0CL80 117 aa6.64□□□□□ -1.35
TMEM39A-202ENST00000438581 GAGE12GP0CL81 117 aa6.64□□□□□ -1.35
TMEM39A-202ENST00000438581 GAGE12IP0CL82 117 aa6.64□□□□□ -1.35
TMEM39A-202ENST00000438581 GAGE4Q13068 117 aa6.64□□□□□ -1.35
TMEM39A-202ENST00000438581 ERASQ7Z444 233 aa6.64□□□□□ -1.35
TMEM39A-202ENST00000438581 BPIFA4PQ86YQ2 179 aa6.64□□□□□ -1.35
TMEM39A-202ENST00000438581 WNT10AQ9GZT5 417 aa6.64□□□□□ -1.35
TMEM39A-202ENST00000438581 TNCP24821 2201 aa6.64□□□□□ -1.35
TMEM39A-202ENST00000438581 TRBV6-6A0A0A6YYG2 114 aa6.64□□□□□ -1.35
TMEM39A-202ENST00000438581 NDUFS7O75251 213 aa6.64□□□□□ -1.35
TMEM39A-202ENST00000438581 CGAP01215 116 aa6.64□□□□□ -1.35
TMEM39A-202ENST00000438581 TRGV3P03979 118 aa6.64□□□□□ -1.35
TMEM39A-202ENST00000438581 CRYBB3P26998 211 aa6.64□□□□□ -1.35
TMEM39A-202ENST00000438581 EMP1P54849 157 aa6.64□□□□□ -1.35
TMEM39A-202ENST00000438581 Q6ZRM9 215 aa6.64□□□□□ -1.35
TMEM39A-202ENST00000438581 C8orf31Q8N9H6 132 aa6.64□□□□□ -1.35
TMEM39A-202ENST00000438581 FBXL7Q9UJT9 491 aa6.64□□□□□ -1.35
TMEM39A-202ENST00000438581 GAGE12BA1L429 117 aa6.64□□□□□ -1.35
TMEM39A-202ENST00000438581 TMEM8BA6NDV4 472 aa6.64□□□□□ -1.35
TMEM39A-202ENST00000438581 A8MZ25 164 aa6.64□□□□□ -1.35
TMEM39A-202ENST00000438581 IGHV3-11P01762 117 aa6.64□□□□□ -1.35
TMEM39A-202ENST00000438581 MAPK1IP1LQ8NDC0 245 aa6.64□□□□□ -1.35
TMEM39A-202ENST00000438581 ARPC1AQ92747 370 aa6.64□□□□□ -1.35
TMEM39A-202ENST00000438581 MBNL3Q9NUK0 354 aaKnown RBP6.64□□□□□ -1.35
TMEM39A-202ENST00000438581 SIGLEC9Q9Y336 463 aa6.64□□□□□ -1.35
TMEM39A-202ENST00000438581 RFNGQ9Y644 331 aa6.64□□□□□ -1.35
TMEM39A-202ENST00000438581 LRRK2Q5S007 2527 aa6.64□□□□□ -1.35
TMEM39A-202ENST00000438581 IGHV3-66A0A0C4DH42 116 aa6.64□□□□□ -1.35
TMEM39A-202ENST00000438581 VENTXO95231 258 aa6.64□□□□□ -1.35
TMEM39A-202ENST00000438581 ERVK11-1P61568 191 aa6.64□□□□□ -1.35
TMEM39A-202ENST00000438581 SRSF2Q01130 221 aaKnown RBP6.64□□□□□ -1.35
TMEM39A-202ENST00000438581 NMSQ5H8A3 153 aa6.64□□□□□ -1.35
TMEM39A-202ENST00000438581 FGF23Q9GZV9 251 aaPredicted RBP6.64□□□□□ -1.35
TMEM39A-202ENST00000438581 HIVEP2P31629 2446 aa6.63□□□□□ -1.35
TMEM39A-202ENST00000438581 IGLV3-9A0A075B6K5 115 aa6.63□□□□□ -1.35
TMEM39A-202ENST00000438581 P01737 135 aa6.63□□□□□ -1.35
TMEM39A-202ENST00000438581 GPR183P32249 361 aa6.63□□□□□ -1.35
TMEM39A-202ENST00000438581 PMCHL1Q16048 86 aa6.63□□□□□ -1.35
TMEM39A-202ENST00000438581 CYP2G1PQ6ZSU1 146 aa6.63□□□□□ -1.35
TMEM39A-202ENST00000438581 TMEM219Q86XT9 240 aa6.63□□□□□ -1.35
TMEM39A-202ENST00000438581 GATAD1Q8WUU5 269 aa6.63□□□□□ -1.35
TMEM39A-202ENST00000438581 TMEM242Q9NWH2 141 aa6.63□□□□□ -1.35
TMEM39A-202ENST00000438581 BMPR1BO00238 502 aa6.63□□□□□ -1.35
TMEM39A-202ENST00000438581 ATP5G2Q06055 141 aa6.63□□□□□ -1.35
TMEM39A-202ENST00000438581 RPEL1Q2QD12 228 aa6.63□□□□□ -1.35
TMEM39A-202ENST00000438581 LINC00305Q7Z4B0 112 aa6.63□□□□□ -1.35
TMEM39A-202ENST00000438581 TMEM116Q8NCL8 245 aa6.63□□□□□ -1.35
TMEM39A-202ENST00000438581 SGMS2Q8NHU3 365 aa6.63□□□□□ -1.35
TMEM39A-202ENST00000438581 METTL26Q96S19 204 aa6.63□□□□□ -1.35
TMEM39A-202ENST00000438581 IGKV1-16P04430 117 aa6.63□□□□□ -1.35
TMEM39A-202ENST00000438581 WNT2P09544 360 aa6.63□□□□□ -1.35
TMEM39A-202ENST00000438581 LMO1P25800 156 aa6.63□□□□□ -1.35
TMEM39A-202ENST00000438581 GATA4P43694 442 aa6.63□□□□□ -1.35
TMEM39A-202ENST00000438581 SMAGPQ0VAQ4 97 aa6.63□□□□□ -1.35
TMEM39A-202ENST00000438581 SP5Q6BEB4 398 aaPredicted RBP6.63□□□□□ -1.35
TMEM39A-202ENST00000438581 VMO1Q7Z5L0 202 aa6.63□□□□□ -1.35
TMEM39A-202ENST00000438581 DYNLRB2Q8TF09 96 aa6.63□□□□□ -1.35
TMEM39A-202ENST00000438581 VPREB3Q9UKI3 123 aa6.63□□□□□ -1.35
TMEM39A-202ENST00000438581 HIST1H1AQ02539 215 aaPredicted RBP6.62□□□□□ -1.35
TMEM39A-202ENST00000438581 SPRNQ5BIV9 151 aa6.62□□□□□ -1.35
TMEM39A-202ENST00000438581 Q8NA96 180 aa6.62□□□□□ -1.35
TMEM39A-202ENST00000438581 C21orf62Q9NYP8 219 aa6.62□□□□□ -1.35
TMEM39A-202ENST00000438581 LOC102724200A0A096LPH7 203 aaPredicted RBP6.62□□□□□ -1.35
TMEM39A-202ENST00000438581 TEX50A0A1B0GTY4 177 aa6.62□□□□□ -1.35
TMEM39A-202ENST00000438581 FCN3O75636 299 aa6.62□□□□□ -1.35
TMEM39A-202ENST00000438581 CSN3P07498 182 aa6.62□□□□□ -1.35
TMEM39A-202ENST00000438581 GCHFRP30047 84 aa6.62□□□□□ -1.35
TMEM39A-202ENST00000438581 UTF1Q5T230 341 aa6.62□□□□□ -1.35
TMEM39A-202ENST00000438581 C16orf92Q96LL3 132 aa6.62□□□□□ -1.35
TMEM39A-202ENST00000438581 IGHV1-3A0A0C4DH29 117 aa6.62□□□□□ -1.35
TMEM39A-202ENST00000438581 A0A1B0GW64 132 aa6.62□□□□□ -1.35
TMEM39A-202ENST00000438581 F5H697 171 aa6.62□□□□□ -1.35
TMEM39A-202ENST00000438581 FAM3BP58499 235 aaPredicted RBP6.62□□□□□ -1.35
TMEM39A-202ENST00000438581 KLF17Q5JT82 389 aaPredicted RBP6.62□□□□□ -1.35
TMEM39A-202ENST00000438581 Q6ZS49 121 aa6.62□□□□□ -1.35
TMEM39A-202ENST00000438581 KIR3DL3Q8N743 410 aa6.62□□□□□ -1.35
TMEM39A-202ENST00000438581 OR1N2Q8NGR9 330 aa6.62□□□□□ -1.35
TMEM39A-202ENST00000438581 SPATA25Q9BR10 227 aa6.62□□□□□ -1.35
TMEM39A-202ENST00000438581 TMEM262E9PQX1 116 aa6.62□□□□□ -1.35
TMEM39A-202ENST00000438581 AMY1AP04745 511 aa6.62□□□□□ -1.35
TMEM39A-202ENST00000438581 Q6ZN92 141 aa6.62□□□□□ -1.35
TMEM39A-202ENST00000438581 SIGLECL1Q8N7X8 197 aa6.62□□□□□ -1.35
TMEM39A-202ENST00000438581 C5orf17Q8NAS9 161 aa6.62□□□□□ -1.35
TMEM39A-202ENST00000438581 PARLQ9H300 379 aa6.62□□□□□ -1.35
TMEM39A-202ENST00000438581 NAV3Q8IVL0 2385 aa6.61□□□□□ -1.35
TMEM39A-202ENST00000438581 JMJD1CQ15652 2540 aa6.61□□□□□ -1.35
TMEM39A-202ENST00000438581 TNRC6AQ8NDV7 1962 aaKnown RBP6.61□□□□□ -1.35
TMEM39A-202ENST00000438581 SH2D7A6NKC9 451 aaPredicted RBP6.61□□□□□ -1.35
TMEM39A-202ENST00000438581 ZNF561-AS1K7EIQ3 104 aa6.61□□□□□ -1.35
TMEM39A-202ENST00000438581 SOD3P08294 240 aa6.61□□□□□ -1.35
TMEM39A-202ENST00000438581 PRB4P10163 310 aaPredicted RBP6.61□□□□□ -1.35
TMEM39A-202ENST00000438581 IER3P46695 156 aa6.61□□□□□ -1.35
TMEM39A-202ENST00000438581 PRCDQ00LT1 54 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms