RNA–Protein interactions for RNA: ENST00000435986.1

HMGB1P45-201, Transcript of high mobility group box 1 pseudogene 45, humanhuman

BASIC

Gene HMGB1P45, Length 653 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P45-201ENST00000435986 DSPPQ9NZW4 1301 aa2.56□□□□□ -2
HMGB1P45-201ENST00000435986 SPATA31E1Q6ZUB1 1445 aa2.56□□□□□ -2
HMGB1P45-201ENST00000435986 GRIN2AQ12879 1464 aa2.56□□□□□ -2
HMGB1P45-201ENST00000435986 ADGBQ8N7X0 1667 aa2.56□□□□□ -2
HMGB1P45-201ENST00000435986 ZNF106Q9H2Y7 1883 aaKnown RBP2.56□□□□□ -2
HMGB1P45-201ENST00000435986 GPR179Q6PRD1 2367 aa2.56□□□□□ -2
HMGB1P45-201ENST00000435986 TRBV27A0A0K0K1C4 114 aa2.55□□□□□ -2
HMGB1P45-201ENST00000435986 OR2T8A6NH00 312 aa2.55□□□□□ -2
HMGB1P45-201ENST00000435986 SLC25A20O43772 301 aa2.55□□□□□ -2
HMGB1P45-201ENST00000435986 IGHV3-30-3P0DP02 117 aa2.55□□□□□ -2
HMGB1P45-201ENST00000435986 HLA-DMBP28068 263 aa2.55□□□□□ -2
HMGB1P45-201ENST00000435986 FOXA3P55318 350 aaPredicted RBP2.55□□□□□ -2
HMGB1P45-201ENST00000435986 ARPP19P56211 112 aa2.55□□□□□ -2
HMGB1P45-201ENST00000435986 FXYD7P58549 80 aa2.55□□□□□ -2
HMGB1P45-201ENST00000435986 CDK6Q00534 326 aa2.55□□□□□ -2
HMGB1P45-201ENST00000435986 AKR1C1Q04828 323 aa2.55□□□□□ -2
HMGB1P45-201ENST00000435986 ARHGAP31Q2M1Z3 1444 aa2.55□□□□□ -2
HMGB1P45-201ENST00000435986 C10orf91Q5T1B1 145 aa2.55□□□□□ -2
HMGB1P45-201ENST00000435986 GTF2H5Q6ZYL4 71 aa2.55□□□□□ -2
HMGB1P45-201ENST00000435986 PHF5AQ7RTV0 110 aaKnown RBP2.55□□□□□ -2
HMGB1P45-201ENST00000435986 BCL9LQ86UU0 1499 aa2.55□□□□□ -2
HMGB1P45-201ENST00000435986 SNX29P2Q8IUI4 249 aa2.55□□□□□ -2
HMGB1P45-201ENST00000435986 ZFP62Q8NB50 900 aaPredicted RBP2.55□□□□□ -2
HMGB1P45-201ENST00000435986 OR5D14Q8NGL3 314 aa2.55□□□□□ -2
HMGB1P45-201ENST00000435986 OR10AC1Q8NH08 325 aa2.55□□□□□ -2
HMGB1P45-201ENST00000435986 WFDC5Q8TCV5 224 aa2.55□□□□□ -2
HMGB1P45-201ENST00000435986 SFT2D1Q8WV19 159 aa2.55□□□□□ -2
HMGB1P45-201ENST00000435986 NAA38Q9BRA0 125 aaKnown RBP2.55□□□□□ -2
HMGB1P45-201ENST00000435986 KRTAP4-3Q9BYR4 195 aa2.55□□□□□ -2
HMGB1P45-201ENST00000435986 C11orf1Q9H5F2 150 aa2.55□□□□□ -2
HMGB1P45-201ENST00000435986 KIF13BQ9NQT8 1826 aa2.55□□□□□ -2
HMGB1P45-201ENST00000435986 OSTCQ9NRP0 149 aa2.55□□□□□ -2
HMGB1P45-201ENST00000435986 BAZ1BQ9UIG0 1483 aaKnown RBP2.55□□□□□ -2
HMGB1P45-201ENST00000435986 LINC00588Q9Y4M8 146 aa2.55□□□□□ -2
HMGB1P45-201ENST00000435986 DICER1Q9UPY3 1922 aaKnown RBP2.54□□□□□ -2
HMGB1P45-201ENST00000435986 RALGAPA2Q2PPJ7 1873 aa2.54□□□□□ -2
HMGB1P45-201ENST00000435986 KIF13AQ9H1H9 1805 aa2.54□□□□□ -2
HMGB1P45-201ENST00000435986 TRAV27A0A087WT01 109 aa2.54□□□□□ -2
HMGB1P45-201ENST00000435986 TRGV10A0A0A0MS01 117 aa2.54□□□□□ -2
HMGB1P45-201ENST00000435986 IGKV1-9A0A0C4DH69 117 aa2.54□□□□□ -2
HMGB1P45-201ENST00000435986 A8MWP4 228 aa2.54□□□□□ -2
HMGB1P45-201ENST00000435986 A8MWV9 139 aa2.54□□□□□ -2
HMGB1P45-201ENST00000435986 C16orf90A8MZG2 172 aa2.54□□□□□ -2
HMGB1P45-201ENST00000435986 CCL25O15444 150 aa2.54□□□□□ -2
HMGB1P45-201ENST00000435986 HIST1H2BKO60814 126 aa2.54□□□□□ -2
HMGB1P45-201ENST00000435986 SH2D1AO60880 128 aa2.54□□□□□ -2
HMGB1P45-201ENST00000435986 SOD1P00441 154 aa2.54□□□□□ -2
HMGB1P45-201ENST00000435986 IGKV1D-33P01593 117 aa2.54□□□□□ -2
HMGB1P45-201ENST00000435986 IGKV1-33P01594 117 aa2.54□□□□□ -2
HMGB1P45-201ENST00000435986 TRGV3P03979 118 aa2.54□□□□□ -2
HMGB1P45-201ENST00000435986 HIST1H2BJP06899 126 aa2.54□□□□□ -2
HMGB1P45-201ENST00000435986 SLC25A16P16260 332 aa2.54□□□□□ -2
HMGB1P45-201ENST00000435986 AQP4P55087 323 aa2.54□□□□□ -2
HMGB1P45-201ENST00000435986 QRFPP83859 136 aa2.54□□□□□ -2
HMGB1P45-201ENST00000435986 PLGLB1Q02325 96 aa2.54□□□□□ -2
HMGB1P45-201ENST00000435986 KRTAP13-3Q3SY46 172 aa2.54□□□□□ -2
HMGB1P45-201ENST00000435986 KRTAP13-2Q52LG2 175 aa2.54□□□□□ -2
HMGB1P45-201ENST00000435986 MEIG1Q5JSS6 88 aa2.54□□□□□ -2
HMGB1P45-201ENST00000435986 NCMAPQ5T1S8 102 aa2.54□□□□□ -2
HMGB1P45-201ENST00000435986 KPRPQ5T749 579 aaPredicted RBP2.54□□□□□ -2
HMGB1P45-201ENST00000435986 LCE3AQ5TA76 89 aa2.54□□□□□ -2
HMGB1P45-201ENST00000435986 C22orf39Q6P5X5 142 aa2.54□□□□□ -2
HMGB1P45-201ENST00000435986 LCN15Q6UWW0 184 aa2.54□□□□□ -2
HMGB1P45-201ENST00000435986 ZNF705AQ6ZN79 300 aaPredicted RBP2.54□□□□□ -2
HMGB1P45-201ENST00000435986 MIR17HGQ75NE6 70 aa2.54□□□□□ -2
HMGB1P45-201ENST00000435986 HIST3H2BBQ8N257 126 aa2.54□□□□□ -2
HMGB1P45-201ENST00000435986 C1orf64Q8NEQ6 169 aa2.54□□□□□ -2
HMGB1P45-201ENST00000435986 NAT14Q8WUY8 206 aa2.54□□□□□ -2
HMGB1P45-201ENST00000435986 HIST1H2BLQ99880 126 aa2.54□□□□□ -2
HMGB1P45-201ENST00000435986 WIZO95785 1651 aa2.53□□□□□ -2
HMGB1P45-201ENST00000435986 MBD5Q9P267 1494 aa2.53□□□□□ -2
HMGB1P45-201ENST00000435986 CRB1P82279 1406 aa2.53□□□□□ -2
HMGB1P45-201ENST00000435986 TRBV24-1A0A075B6N3 115 aa2.53□□□□□ -2
HMGB1P45-201ENST00000435986 A0A0G2JMM0 328 aa2.53□□□□□ -2
HMGB1P45-201ENST00000435986 FAM236AA0A1B0GUQ0 79 aa2.53□□□□□ -2
HMGB1P45-201ENST00000435986 FAM236BA0A1B0GV22 79 aa2.53□□□□□ -2
HMGB1P45-201ENST00000435986 SPAARA0A1B0GVQ0 90 aa2.53□□□□□ -2
HMGB1P45-201ENST00000435986 A0A1W2PPB8 328 aa2.53□□□□□ -2
HMGB1P45-201ENST00000435986 GRIFINA4D1Z8 144 aa2.53□□□□□ -2
HMGB1P45-201ENST00000435986 ZNF727A8MUV8 499 aa2.53□□□□□ -2
HMGB1P45-201ENST00000435986 KIR3DP1A8MWS1 328 aa2.53□□□□□ -2
HMGB1P45-201ENST00000435986 CDC42EP2O14613 210 aa2.53□□□□□ -2
HMGB1P45-201ENST00000435986 IGHV1-69P01742 117 aa2.53□□□□□ -2
HMGB1P45-201ENST00000435986 IGHV3-7P01780 117 aa2.53□□□□□ -2
HMGB1P45-201ENST00000435986 CCL3P10147 92 aa2.53□□□□□ -2
HMGB1P45-201ENST00000435986 HIST1H1DP16402 221 aaKnown RBP2.53□□□□□ -2
HMGB1P45-201ENST00000435986 CRHBPP24387 322 aa2.53□□□□□ -2
HMGB1P45-201ENST00000435986 ZNF93P35789 620 aaPredicted RBP2.53□□□□□ -2
HMGB1P45-201ENST00000435986 EIF2B2P49770 351 aaKnown RBP2.53□□□□□ -2
HMGB1P45-201ENST00000435986 EIF5AL1Q6IS14 154 aaKnown RBP2.53□□□□□ -2
HMGB1P45-201ENST00000435986 ZNF322Q6U7Q0 402 aaPredicted RBP2.53□□□□□ -2
HMGB1P45-201ENST00000435986 CNEP1R1Q8N9A8 125 aa2.53□□□□□ -2
HMGB1P45-201ENST00000435986 OR5D16Q8NGK9 328 aa2.53□□□□□ -2
HMGB1P45-201ENST00000435986 OR5H6Q8NGV6 325 aa2.53□□□□□ -2
HMGB1P45-201ENST00000435986 PRELID3AQ96N28 172 aa2.53□□□□□ -2
HMGB1P45-201ENST00000435986 ZNF714Q96N38 554 aa2.53□□□□□ -2
HMGB1P45-201ENST00000435986 SCGB3A1Q96QR1 104 aa2.53□□□□□ -2
HMGB1P45-201ENST00000435986 SDF2Q99470 211 aa2.53□□□□□ -2
HMGB1P45-201ENST00000435986 MRPL57Q9BQC6 102 aaKnown RBP2.53□□□□□ -2
HMGB1P45-201ENST00000435986 NPCDR1Q9BY65 106 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms