RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 AGPAT2O15120 278 aa11.63□□□□□ -0.55
TREX1-201ENST00000433541 FRMD6-AS1P0C7T7 363 aa11.63□□□□□ -0.55
TREX1-201ENST00000433541 FGF7P21781 194 aa11.63□□□□□ -0.55
TREX1-201ENST00000433541 CAMLGP49069 296 aa11.63□□□□□ -0.55
TREX1-201ENST00000433541 SIGLEC15Q6ZMC9 328 aa11.63□□□□□ -0.55
TREX1-201ENST00000433541 S100A7AQ86SG5 101 aa11.63□□□□□ -0.55
TREX1-201ENST00000433541 ASCL2Q99929 193 aa11.63□□□□□ -0.55
TREX1-201ENST00000433541 ARL6Q9H0F7 186 aa11.63□□□□□ -0.55
TREX1-201ENST00000433541 MS4A6AQ9H2W1 248 aa11.63□□□□□ -0.55
TREX1-201ENST00000433541 SRD5A3Q9H8P0 318 aa11.63□□□□□ -0.55
TREX1-201ENST00000433541 HYPMO75409 117 aa11.62□□□□□ -0.55
TREX1-201ENST00000433541 RPL12P30050 165 aaKnown RBP11.62□□□□□ -0.55
TREX1-201ENST00000433541 AP2S1P53680 142 aaPredicted RBP11.62□□□□□ -0.55
TREX1-201ENST00000433541 FGL1Q08830 312 aa11.62□□□□□ -0.55
TREX1-201ENST00000433541 C16orf54Q6UWD8 224 aa11.62□□□□□ -0.55
TREX1-201ENST00000433541 TMEM182Q6ZP80 229 aaPredicted RBP11.62□□□□□ -0.55
TREX1-201ENST00000433541 OR8I2Q8N0Y5 310 aa11.62□□□□□ -0.55
TREX1-201ENST00000433541 B9D2Q9BPU9 175 aa11.62□□□□□ -0.55
TREX1-201ENST00000433541 FBXL17Q9UF56 701 aa11.62□□□□□ -0.55
TREX1-201ENST00000433541 HIGD1AQ9Y241 93 aa11.62□□□□□ -0.55
TREX1-201ENST00000433541 BUB3O43684 328 aa11.61□□□□□ -0.55
TREX1-201ENST00000433541 COX7A2P2O60397 106 aa11.61□□□□□ -0.55
TREX1-201ENST00000433541 GIPP09681 153 aaPredicted RBP11.61□□□□□ -0.55
TREX1-201ENST00000433541 FAM90A2PQ658T7 463 aa11.61□□□□□ -0.55
TREX1-201ENST00000433541 GLMPQ8WWB7 406 aa11.61□□□□□ -0.55
TREX1-201ENST00000433541 MGST2Q99735 147 aa11.61□□□□□ -0.55
TREX1-201ENST00000433541 RNF126Q9BV68 326 aa11.61□□□□□ -0.55
TREX1-201ENST00000433541 SMIM3Q9BZL3 60 aa11.61□□□□□ -0.55
TREX1-201ENST00000433541 WDR83OSQ9Y284 106 aa11.61□□□□□ -0.55
TREX1-201ENST00000433541 U3KQE9 123 aa11.61□□□□□ -0.55
TREX1-201ENST00000433541 CMC4P56277 68 aaPredicted RBP11.6□□□□□ -0.55
TREX1-201ENST00000433541 Q6ZRG5 221 aa11.6□□□□□ -0.55
TREX1-201ENST00000433541 ASB13Q8WXK3 278 aa11.6□□□□□ -0.55
TREX1-201ENST00000433541 HSPB11Q9Y547 144 aa11.6□□□□□ -0.55
TREX1-201ENST00000433541 TGP01266 2768 aa11.59□□□□□ -0.55
TREX1-201ENST00000433541 VWC2Q2TAL6 325 aa11.59□□□□□ -0.55
TREX1-201ENST00000433541 C1orf194Q5T5A4 169 aa11.59□□□□□ -0.55
TREX1-201ENST00000433541 LEMD1Q68G75 181 aa11.59□□□□□ -0.55
TREX1-201ENST00000433541 ZNF709Q8N972 641 aa11.59□□□□□ -0.55
TREX1-201ENST00000433541 ATP5SQ99766 215 aa11.59□□□□□ -0.55
TREX1-201ENST00000433541 GGTLC1Q9BX51 225 aa11.59□□□□□ -0.55
TREX1-201ENST00000433541 SLC45A2Q9UMX9 530 aa11.59□□□□□ -0.55
TREX1-201ENST00000433541 FXYD6-FXYD2A0A087WZ82 144 aa11.58□□□□□ -0.56
TREX1-201ENST00000433541 ZNF98A6NK75 572 aa11.58□□□□□ -0.56
TREX1-201ENST00000433541 MPDU1O75352 247 aa11.58□□□□□ -0.56
TREX1-201ENST00000433541 IFNA5P01569 189 aa11.58□□□□□ -0.56
TREX1-201ENST00000433541 ZNF688P0C7X2 276 aa11.58□□□□□ -0.56
TREX1-201ENST00000433541 GALR1P47211 349 aa11.58□□□□□ -0.56
TREX1-201ENST00000433541 ODF3L2Q3SX64 289 aa11.58□□□□□ -0.56
TREX1-201ENST00000433541 PXDC1Q5TGL8 231 aa11.58□□□□□ -0.56
TREX1-201ENST00000433541 MIC13Q5XKP0 118 aa11.58□□□□□ -0.56
TREX1-201ENST00000433541 APRG1Q8IVJ8 170 aa11.58□□□□□ -0.56
TREX1-201ENST00000433541 STPG3Q8N7X2 389 aa11.58□□□□□ -0.56
TREX1-201ENST00000433541 OR2T35Q8NGX2 323 aa11.58□□□□□ -0.56
TREX1-201ENST00000433541 SCGB1C1Q8TD33 95 aa11.58□□□□□ -0.56
TREX1-201ENST00000433541 UHRF2Q96PU4 802 aa11.58□□□□□ -0.56
TREX1-201ENST00000433541 SCRT1Q9BWW7 348 aa11.58□□□□□ -0.56
TREX1-201ENST00000433541 SLC25A39Q9BZJ4 359 aaPredicted RBP11.58□□□□□ -0.56
TREX1-201ENST00000433541 ARV1Q9H2C2 271 aa11.58□□□□□ -0.56
TREX1-201ENST00000433541 NRN1Q9NPD7 142 aa11.58□□□□□ -0.56
TREX1-201ENST00000433541 TRAV2A0A0B4J234 112 aa11.57□□□□□ -0.56
TREX1-201ENST00000433541 C17orf112F2Z3M2 114 aa11.57□□□□□ -0.56
TREX1-201ENST00000433541 ATF4P18848 351 aaPredicted RBP11.57□□□□□ -0.56
TREX1-201ENST00000433541 DEFB131AP59861 70 aa11.57□□□□□ -0.56
TREX1-201ENST00000433541 B2MP61769 119 aa11.57□□□□□ -0.56
TREX1-201ENST00000433541 SNRPD3P62318 126 aaKnown RBP11.57□□□□□ -0.56
TREX1-201ENST00000433541 C10orf113Q5VZT2 155 aa11.57□□□□□ -0.56
TREX1-201ENST00000433541 INO80EQ8NBZ0 244 aaPredicted RBP11.57□□□□□ -0.56
TREX1-201ENST00000433541 MAP6D1Q9H9H5 199 aa11.57□□□□□ -0.56
TREX1-201ENST00000433541 KCNIP2Q9NS61 270 aa11.57□□□□□ -0.56
TREX1-201ENST00000433541 RNF24Q9Y225 148 aa11.57□□□□□ -0.56
TREX1-201ENST00000433541 PRKDCP78527 4128 aaKnown RBP11.57□□□□□ -0.56
TREX1-201ENST00000433541 A8MZ25 164 aa11.56□□□□□ -0.56
TREX1-201ENST00000433541 H3BRN7 92 aa11.56□□□□□ -0.56
TREX1-201ENST00000433541 K7EQG2 157 aa11.56□□□□□ -0.56
TREX1-201ENST00000433541 PLP1P60201 277 aa11.56□□□□□ -0.56
TREX1-201ENST00000433541 LINC00305Q7Z4B0 112 aa11.56□□□□□ -0.56
TREX1-201ENST00000433541 SBSPONQ8IVN8 264 aa11.56□□□□□ -0.56
TREX1-201ENST00000433541 OR1L4Q8NGR5 311 aa11.56□□□□□ -0.56
TREX1-201ENST00000433541 GPR82Q96P67 336 aa11.56□□□□□ -0.56
TREX1-201ENST00000433541 PFDN5Q99471 154 aa11.56□□□□□ -0.56
TREX1-201ENST00000433541 SHANK2-AS3Q9BTD1 123 aa11.56□□□□□ -0.56
TREX1-201ENST00000433541 NPCDR1Q9BY65 106 aa11.56□□□□□ -0.56
TREX1-201ENST00000433541 SLC25A32Q9H2D1 315 aa11.56□□□□□ -0.56
TREX1-201ENST00000433541 ZMAT4Q9H898 229 aa11.56□□□□□ -0.56
TREX1-201ENST00000433541 SLC39A9Q9NUM3 307 aa11.56□□□□□ -0.56
TREX1-201ENST00000433541 C19orf73Q9NVV2 129 aa11.56□□□□□ -0.56
TREX1-201ENST00000433541 PXMP4Q9Y6I8 212 aa11.56□□□□□ -0.56
TREX1-201ENST00000433541 ELOA3CA0A087WX78 387 aaPredicted RBP11.55□□□□□ -0.56
TREX1-201ENST00000433541 LOC102724200A0A096LPH7 203 aaPredicted RBP11.55□□□□□ -0.56
TREX1-201ENST00000433541 LYL1P12980 280 aa11.55□□□□□ -0.56
TREX1-201ENST00000433541 RPL35AP18077 110 aaKnown RBP11.55□□□□□ -0.56
TREX1-201ENST00000433541 ID1P41134 155 aa11.55□□□□□ -0.56
TREX1-201ENST00000433541 RPL29P47914 159 aaKnown RBP11.55□□□□□ -0.56
TREX1-201ENST00000433541 OPCMLQ14982 345 aa11.55□□□□□ -0.56
TREX1-201ENST00000433541 ZNF124Q15973 351 aa11.55□□□□□ -0.56
TREX1-201ENST00000433541 PSMG4Q5JS54 123 aa11.55□□□□□ -0.56
TREX1-201ENST00000433541 FAM24BQ8N5W8 94 aa11.55□□□□□ -0.56
TREX1-201ENST00000433541 WDR61Q9GZS3 305 aaKnown RBP11.55□□□□□ -0.56
TREX1-201ENST00000433541 NHLRC4P0CG21 123 aaPredicted RBP11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms