RNA–Protein interactions for RNA: ENST00000431283.1

PTPN4-204, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-204ENST00000431283 GALNT14Q96FL9 552 aa2.43□□□□□ -2.02
PTPN4-204ENST00000431283 ARHGAP5-AS1Q96IT6 56 aa2.43□□□□□ -2.02
PTPN4-204ENST00000431283 OR2A7Q96R45 310 aa2.43□□□□□ -2.02
PTPN4-204ENST00000431283 RARRES2Q99969 163 aa2.43□□□□□ -2.02
PTPN4-204ENST00000431283 HDHD3Q9BSH5 251 aaPredicted RBP2.43□□□□□ -2.02
PTPN4-204ENST00000431283 PECRQ9BY49 303 aa2.43□□□□□ -2.02
PTPN4-204ENST00000431283 OR51E2Q9H255 320 aa2.43□□□□□ -2.02
PTPN4-204ENST00000431283 DAZ1Q9NQZ3 744 aaKnown RBP2.43□□□□□ -2.02
PTPN4-204ENST00000431283 SLC2A9Q9NRM0 540 aa2.43□□□□□ -2.02
PTPN4-204ENST00000431283 SMPD3Q9NY59 655 aaPredicted RBP2.43□□□□□ -2.02
PTPN4-204ENST00000431283 RAB22AQ9UL26 194 aa2.43□□□□□ -2.02
PTPN4-204ENST00000431283 DNAH10Q8IVF4 4471 aa2.43□□□□□ -2.02
PTPN4-204ENST00000431283 IGKV1-6A0A0C4DH72 117 aa2.42□□□□□ -2.02
PTPN4-204ENST00000431283 METTL21EPA6NDL7 271 aa2.42□□□□□ -2.02
PTPN4-204ENST00000431283 IGLL5B9A064 214 aa2.42□□□□□ -2.02
PTPN4-204ENST00000431283 DENRO43583 198 aaKnown RBP2.42□□□□□ -2.02
PTPN4-204ENST00000431283 MRPS14O60783 128 aaKnown RBP2.42□□□□□ -2.02
PTPN4-204ENST00000431283 ARL6IP5O75915 188 aa2.42□□□□□ -2.02
PTPN4-204ENST00000431283 HRASP01112 189 aa2.42□□□□□ -2.02
PTPN4-204ENST00000431283 CDK1P06493 297 aa2.42□□□□□ -2.02
PTPN4-204ENST00000431283 CRYGCP07315 174 aa2.42□□□□□ -2.02
PTPN4-204ENST00000431283 CTXN2P0C2S0 81 aa2.42□□□□□ -2.02
PTPN4-204ENST00000431283 C8orf88P0DMB2 117 aa2.42□□□□□ -2.02
PTPN4-204ENST00000431283 RPA2P15927 270 aa2.42□□□□□ -2.02
PTPN4-204ENST00000431283 CTRB1P17538 263 aa2.42□□□□□ -2.02
PTPN4-204ENST00000431283 CRHBPP24387 322 aa2.42□□□□□ -2.02
PTPN4-204ENST00000431283 CCR6P51684 374 aa2.42□□□□□ -2.02
PTPN4-204ENST00000431283 RPL8P62917 257 aaKnown RBP2.42□□□□□ -2.02
PTPN4-204ENST00000431283 QRFPP83859 136 aa2.42□□□□□ -2.02
PTPN4-204ENST00000431283 EWSR1Q01844 656 aaKnown RBP eCLIP2.42□□□□□ -2.02
PTPN4-204ENST00000431283 ARL6IP1Q15041 203 aa2.42□□□□□ -2.02
PTPN4-204ENST00000431283 C10orf55Q5SWW7 151 aa2.42□□□□□ -2.02
PTPN4-204ENST00000431283 CTRB2Q6GPI1 263 aa2.42□□□□□ -2.02
PTPN4-204ENST00000431283 AHSA2Q719I0 299 aa2.42□□□□□ -2.02
PTPN4-204ENST00000431283 ZNF645Q8N7E2 425 aa2.42□□□□□ -2.02
PTPN4-204ENST00000431283 OR11H2Q8NH07 326 aa2.42□□□□□ -2.02
PTPN4-204ENST00000431283 OR5B3Q8NH48 314 aa2.42□□□□□ -2.02
PTPN4-204ENST00000431283 TCTEX1D2Q8WW35 142 aa2.42□□□□□ -2.02
PTPN4-204ENST00000431283 UFD1Q92890 307 aa2.42□□□□□ -2.02
PTPN4-204ENST00000431283 FAM3DQ96BQ1 224 aa2.42□□□□□ -2.02
PTPN4-204ENST00000431283 HSD17B10Q99714 261 aaKnown RBP2.42□□□□□ -2.02
PTPN4-204ENST00000431283 C20orf24Q9BUV8 137 aa2.42□□□□□ -2.02
PTPN4-204ENST00000431283 MND1Q9BWT6 205 aa2.42□□□□□ -2.02
PTPN4-204ENST00000431283 LPAR5Q9H1C0 372 aa2.42□□□□□ -2.02
PTPN4-204ENST00000431283 HRASLSQ9HDD0 168 aa2.42□□□□□ -2.02
PTPN4-204ENST00000431283 C8orf4Q9NR00 106 aa2.42□□□□□ -2.02
PTPN4-204ENST00000431283 NDUFA13Q9P0J0 144 aa2.42□□□□□ -2.02
PTPN4-204ENST00000431283 A0A075B6Q4 140 aa2.41□□□□□ -2.02
PTPN4-204ENST00000431283 A0A096LNJ9 63 aa2.41□□□□□ -2.02
PTPN4-204ENST00000431283 OR2T8A6NH00 312 aa2.41□□□□□ -2.02
PTPN4-204ENST00000431283 FBLL1A6NHQ2 334 aaKnown RBP2.41□□□□□ -2.02
PTPN4-204ENST00000431283 J3QRK9 145 aa2.41□□□□□ -2.02
PTPN4-204ENST00000431283 DNASE2O00115 360 aaPredicted RBP2.41□□□□□ -2.02
PTPN4-204ENST00000431283 NDUFA4O00483 81 aa2.41□□□□□ -2.02
PTPN4-204ENST00000431283 PDCD5O14737 125 aa2.41□□□□□ -2.02
PTPN4-204ENST00000431283 YIF1AO95070 293 aa2.41□□□□□ -2.02
PTPN4-204ENST00000431283 SNAPINO95295 136 aa2.41□□□□□ -2.02
PTPN4-204ENST00000431283 REG1AP05451 166 aa2.41□□□□□ -2.02
PTPN4-204ENST00000431283 EIF4EP06730 217 aaKnown RBP2.41□□□□□ -2.02
PTPN4-204ENST00000431283 UCHL1P09936 223 aa2.41□□□□□ -2.02
PTPN4-204ENST00000431283 ZNF735P0CB33 412 aa2.41□□□□□ -2.02
PTPN4-204ENST00000431283 HSMCR30P0CW71 290 aa2.41□□□□□ -2.02
PTPN4-204ENST00000431283 CD37P11049 281 aa2.41□□□□□ -2.02
PTPN4-204ENST00000431283 HLA-GP17693 338 aa2.41□□□□□ -2.02
PTPN4-204ENST00000431283 DTYMKP23919 212 aa2.41□□□□□ -2.02
PTPN4-204ENST00000431283 PSMA1P25786 263 aaKnown RBP2.41□□□□□ -2.02
PTPN4-204ENST00000431283 CALRP27797 417 aaKnown RBP2.41□□□□□ -2.02
PTPN4-204ENST00000431283 ARPC4P59998 168 aa2.41□□□□□ -2.02
PTPN4-204ENST00000431283 INSL4Q14641 139 aa2.41□□□□□ -2.02
PTPN4-204ENST00000431283 RCN1Q15293 331 aa2.41□□□□□ -2.02
PTPN4-204ENST00000431283 TRAM1Q15629 374 aa2.41□□□□□ -2.02
PTPN4-204ENST00000431283 C2orf76Q3KRA6 126 aa2.41□□□□□ -2.02
PTPN4-204ENST00000431283 TMEM41BQ5BJD5 291 aa2.41□□□□□ -2.02
PTPN4-204ENST00000431283 SOHLH1Q5JUK2 328 aa2.41□□□□□ -2.02
PTPN4-204ENST00000431283 LIPKQ5VXJ0 399 aa2.41□□□□□ -2.02
PTPN4-204ENST00000431283 THOC7Q6I9Y2 204 aaKnown RBP2.41□□□□□ -2.02
PTPN4-204ENST00000431283 OR8G2PQ6IF36 304 aa2.41□□□□□ -2.02
PTPN4-204ENST00000431283 SLC25A24Q6NUK1 477 aa2.41□□□□□ -2.02
PTPN4-204ENST00000431283 UNQ9165/PRO28630Q6UXU0 137 aa2.41□□□□□ -2.02
PTPN4-204ENST00000431283 SSX9Q7RTT3 188 aa2.41□□□□□ -2.02
PTPN4-204ENST00000431283 APRG1Q8IVJ8 170 aa2.41□□□□□ -2.02
PTPN4-204ENST00000431283 C8orf59Q8N0T1 100 aaPredicted RBP2.41□□□□□ -2.02
PTPN4-204ENST00000431283 VKORC1L1Q8N0U8 176 aa2.41□□□□□ -2.02
PTPN4-204ENST00000431283 DHRSXQ8N5I4 330 aa2.41□□□□□ -2.02
PTPN4-204ENST00000431283 BPIFB6Q8NFQ5 453 aa2.41□□□□□ -2.02
PTPN4-204ENST00000431283 OR10R2Q8NGX6 335 aa2.41□□□□□ -2.02
PTPN4-204ENST00000431283 TMEM167AQ8TBQ9 72 aa2.41□□□□□ -2.02
PTPN4-204ENST00000431283 ZNF502Q8TBZ5 544 aa2.41□□□□□ -2.02
PTPN4-204ENST00000431283 RNASE8Q8TDE3 154 aaKnown RBP2.41□□□□□ -2.02
PTPN4-204ENST00000431283 CD300LFQ8TDQ1 290 aa2.41□□□□□ -2.02
PTPN4-204ENST00000431283 TMEM203Q969S6 136 aa2.41□□□□□ -2.02
PTPN4-204ENST00000431283 C5orf30Q96GV9 206 aa2.41□□□□□ -2.02
PTPN4-204ENST00000431283 ATP6V0BQ99437 205 aa2.41□□□□□ -2.02
PTPN4-204ENST00000431283 ZNF436Q9C0F3 470 aaPredicted RBP2.41□□□□□ -2.02
PTPN4-204ENST00000431283 COMMD5Q9GZQ3 224 aa2.41□□□□□ -2.02
PTPN4-204ENST00000431283 CCDC90BQ9GZT6 254 aa2.41□□□□□ -2.02
PTPN4-204ENST00000431283 SLC5A7Q9GZV3 580 aa2.41□□□□□ -2.02
PTPN4-204ENST00000431283 C11orf68Q9H3H3 251 aaKnown RBP2.41□□□□□ -2.02
PTPN4-204ENST00000431283 ACOT13Q9NPJ3 140 aa2.41□□□□□ -2.02
PTPN4-204ENST00000431283 SCN3BQ9NY72 215 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms