RNA–Protein interactions for RNA: ENST00000430118.1

HMGB3-203, Transcript of high mobility group box 3, humanhuman

TSL 1 (best)

Gene HMGB3, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-203ENST00000430118 UBE2MP61081 183 aaKnown RBP2.97□□□□□ -1.93
HMGB3-203ENST00000430118 LCN2P80188 198 aa2.97□□□□□ -1.93
HMGB3-203ENST00000430118 HMGCS1Q01581 520 aa2.97□□□□□ -1.93
HMGB3-203ENST00000430118 HIST1H1AQ02539 215 aaPredicted RBP2.97□□□□□ -1.93
HMGB3-203ENST00000430118 ACVR1Q04771 509 aa2.97□□□□□ -1.93
HMGB3-203ENST00000430118 PLCXD2Q0VAA5 305 aa2.97□□□□□ -1.93
HMGB3-203ENST00000430118 FOXF1Q12946 379 aa2.97□□□□□ -1.93
HMGB3-203ENST00000430118 MMDQ15546 238 aa2.97□□□□□ -1.93
HMGB3-203ENST00000430118 GABRA6Q16445 453 aa2.97□□□□□ -1.93
HMGB3-203ENST00000430118 UNQ5815/PRO19632Q6UWF5 114 aa2.97□□□□□ -1.93
HMGB3-203ENST00000430118 GTSCR1Q86UQ5 136 aa2.97□□□□□ -1.93
HMGB3-203ENST00000430118 ZNF101Q8IZC7 436 aa2.97□□□□□ -1.93
HMGB3-203ENST00000430118 MUC15Q8N387 334 aa2.97□□□□□ -1.93
HMGB3-203ENST00000430118 GPR32P1Q8NGA4 272 aa2.97□□□□□ -1.93
HMGB3-203ENST00000430118 PTX4Q96A99 478 aa2.97□□□□□ -1.93
HMGB3-203ENST00000430118 OR10C1Q96KK4 312 aa2.97□□□□□ -1.93
HMGB3-203ENST00000430118 ZNF681Q96N22 645 aa2.97□□□□□ -1.93
HMGB3-203ENST00000430118 TSSK3Q96PN8 268 aa2.97□□□□□ -1.93
HMGB3-203ENST00000430118 ZNF649Q9BS31 505 aa2.97□□□□□ -1.93
HMGB3-203ENST00000430118 MAP1LC3BQ9GZQ8 125 aa2.97□□□□□ -1.93
HMGB3-203ENST00000430118 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.97□□□□□ -1.93
HMGB3-203ENST00000430118 CALYQ9NYX4 217 aa2.97□□□□□ -1.93
HMGB3-203ENST00000430118 AHSPQ9NZD4 102 aa2.97□□□□□ -1.93
HMGB3-203ENST00000430118 MTFP1Q9UDX5 166 aa2.97□□□□□ -1.93
HMGB3-203ENST00000430118 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.96□□□□□ -1.94
HMGB3-203ENST00000430118 LYRM9A8MSI8 78 aa2.96□□□□□ -1.94
HMGB3-203ENST00000430118 B4DSR2 109 aa2.96□□□□□ -1.94
HMGB3-203ENST00000430118 C12orf77C9JDV5 145 aa2.96□□□□□ -1.94
HMGB3-203ENST00000430118 C15orf65H3BRN8 121 aa2.96□□□□□ -1.94
HMGB3-203ENST00000430118 TAX1BP3O14907 124 aa2.96□□□□□ -1.94
HMGB3-203ENST00000430118 SIVA1O15304 175 aa2.96□□□□□ -1.94
HMGB3-203ENST00000430118 ZNF682O95780 498 aa2.96□□□□□ -1.94
HMGB3-203ENST00000430118 HLA-HP01893 362 aa2.96□□□□□ -1.94
HMGB3-203ENST00000430118 MAS1P04201 325 aa2.96□□□□□ -1.94
HMGB3-203ENST00000430118 SERPINE2P07093 398 aa2.96□□□□□ -1.94
HMGB3-203ENST00000430118 P0C879 139 aa2.96□□□□□ -1.94
HMGB3-203ENST00000430118 FUT3P21217 361 aa2.96□□□□□ -1.94
HMGB3-203ENST00000430118 TSPOP30536 169 aa2.96□□□□□ -1.94
HMGB3-203ENST00000430118 RBMXP38159 391 aaKnown RBP2.96□□□□□ -1.94
HMGB3-203ENST00000430118 LHX2P50458 406 aa2.96□□□□□ -1.94
HMGB3-203ENST00000430118 FABP6P51161 128 aa2.96□□□□□ -1.94
HMGB3-203ENST00000430118 SUB1P53999 127 aaKnown RBP eCLIP2.96□□□□□ -1.94
HMGB3-203ENST00000430118 SMIM11AP58511 58 aa2.96□□□□□ -1.94
HMGB3-203ENST00000430118 TAS2R31P59538 309 aa2.96□□□□□ -1.94
HMGB3-203ENST00000430118 HLA-DRB3P79483 266 aa2.96□□□□□ -1.94
HMGB3-203ENST00000430118 ZNF92Q03936 586 aa2.96□□□□□ -1.94
HMGB3-203ENST00000430118 BSPH1Q075Z2 132 aa2.96□□□□□ -1.94
HMGB3-203ENST00000430118 TMEM267Q0VDI3 215 aaPredicted RBP2.96□□□□□ -1.94
HMGB3-203ENST00000430118 ARFRP1Q13795 201 aa2.96□□□□□ -1.94
HMGB3-203ENST00000430118 PMCHL1Q16048 86 aa2.96□□□□□ -1.94
HMGB3-203ENST00000430118 TDRG1Q3Y452 100 aa2.96□□□□□ -1.94
HMGB3-203ENST00000430118 TMEM128Q5BJH2 165 aa2.96□□□□□ -1.94
HMGB3-203ENST00000430118 AGTRAPQ6RW13 159 aa2.96□□□□□ -1.94
HMGB3-203ENST00000430118 ASCL4Q6XD76 172 aa2.96□□□□□ -1.94
HMGB3-203ENST00000430118 OR8I2Q8N0Y5 310 aa2.96□□□□□ -1.94
HMGB3-203ENST00000430118 ZDHHC22Q8N966 263 aa2.96□□□□□ -1.94
HMGB3-203ENST00000430118 LRRC75AQ8NAA5 344 aa2.96□□□□□ -1.94
HMGB3-203ENST00000430118 OR4C16Q8NGL9 310 aa2.96□□□□□ -1.94
HMGB3-203ENST00000430118 OR2T27Q8NH04 317 aa2.96□□□□□ -1.94
HMGB3-203ENST00000430118 SLC25A40Q8TBP6 338 aa2.96□□□□□ -1.94
HMGB3-203ENST00000430118 ZNF721Q8TF20 911 aa2.96□□□□□ -1.94
HMGB3-203ENST00000430118 C7orf33Q8WU49 177 aa2.96□□□□□ -1.94
HMGB3-203ENST00000430118 AQP3Q92482 292 aa2.96□□□□□ -1.94
HMGB3-203ENST00000430118 RBMXL1Q96E39 390 aaKnown RBP2.96□□□□□ -1.94
HMGB3-203ENST00000430118 SEH1LQ96EE3 360 aa2.96□□□□□ -1.94
HMGB3-203ENST00000430118 XCL2Q9UBD3 114 aa2.96□□□□□ -1.94
HMGB3-203ENST00000430118 SS18L2Q9UHA2 77 aa2.96□□□□□ -1.94
HMGB3-203ENST00000430118 VPREB3Q9UKI3 123 aa2.96□□□□□ -1.94
HMGB3-203ENST00000430118 VSIG4Q9Y279 399 aa2.96□□□□□ -1.94
HMGB3-203ENST00000430118 UFC1Q9Y3C8 167 aa2.96□□□□□ -1.94
HMGB3-203ENST00000430118 TSSC4Q9Y5U2 329 aaPredicted RBP2.96□□□□□ -1.94
HMGB3-203ENST00000430118 RFNGQ9Y644 331 aa2.96□□□□□ -1.94
HMGB3-203ENST00000430118 EML6Q6ZMW3 1958 aa2.96□□□□□ -1.94
HMGB3-203ENST00000430118 DYSFO75923 2080 aa2.96□□□□□ -1.94
HMGB3-203ENST00000430118 BORCS7-ASMTA0A0B4J1R7 106 aa2.95□□□□□ -1.94
HMGB3-203ENST00000430118 hADV38S2A0JD32 116 aa2.95□□□□□ -1.94
HMGB3-203ENST00000430118 PSMB11A5LHX3 300 aa2.95□□□□□ -1.94
HMGB3-203ENST00000430118 H0Y980 276 aa2.95□□□□□ -1.94
HMGB3-203ENST00000430118 K7EP34 96 aa2.95□□□□□ -1.94
HMGB3-203ENST00000430118 ZNF207O43670 478 aaKnown RBP2.95□□□□□ -1.94
HMGB3-203ENST00000430118 SS18L1O75177 396 aaPredicted RBP2.95□□□□□ -1.94
HMGB3-203ENST00000430118 FOXH1O75593 365 aa2.95□□□□□ -1.94
HMGB3-203ENST00000430118 CNIH1O95406 144 aa2.95□□□□□ -1.94
HMGB3-203ENST00000430118 NRASP01111 189 aa2.95□□□□□ -1.94
HMGB3-203ENST00000430118 IFNA1P01562 189 aa2.95□□□□□ -1.94
HMGB3-203ENST00000430118 IGKV3-11P04433 115 aa2.95□□□□□ -1.94
HMGB3-203ENST00000430118 PFN1P07737 140 aaKnown RBP2.95□□□□□ -1.94
HMGB3-203ENST00000430118 SRP19P09132 144 aaKnown RBP2.95□□□□□ -1.94
HMGB3-203ENST00000430118 LINC00032P0C843 101 aa2.95□□□□□ -1.94
HMGB3-203ENST00000430118 CT45A6P0DMU7 189 aa2.95□□□□□ -1.94
HMGB3-203ENST00000430118 CT45A5P0DMU8 189 aa2.95□□□□□ -1.94
HMGB3-203ENST00000430118 CT45A7P0DMV0 189 aa2.95□□□□□ -1.94
HMGB3-203ENST00000430118 PTHLHP12272 177 aa2.95□□□□□ -1.94
HMGB3-203ENST00000430118 CELP19835 753 aa2.95□□□□□ -1.94
HMGB3-203ENST00000430118 HIST1H1TP22492 207 aaPredicted RBP2.95□□□□□ -1.94
HMGB3-203ENST00000430118 PYCR1P32322 319 aa2.95□□□□□ -1.94
HMGB3-203ENST00000430118 GUCA1AP43080 201 aaPredicted RBP2.95□□□□□ -1.94
HMGB3-203ENST00000430118 SSR2P43308 183 aa2.95□□□□□ -1.94
HMGB3-203ENST00000430118 FOXA1P55317 472 aa2.95□□□□□ -1.94
HMGB3-203ENST00000430118 DSCR4P56555 118 aaPredicted RBP2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms