RNA–Protein interactions for RNA: ENST00000430038.5

CPSF4-203, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 735 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-203ENST00000430038 ZNF705BP0CI00 300 aaPredicted RBP12.24□□□□□ -0.45
CPSF4-203ENST00000430038 SLC25A6P12236 298 aa12.24□□□□□ -0.45
CPSF4-203ENST00000430038 ATP5IP56385 69 aaPredicted RBP12.24□□□□□ -0.45
CPSF4-203ENST00000430038 GGNBP1Q5YKI7 109 aa12.24□□□□□ -0.45
CPSF4-203ENST00000430038 SLC35B3Q9H1N7 401 aa12.24□□□□□ -0.45
CPSF4-203ENST00000430038 SNRPGP15A8MWD9 76 aa12.23□□□□□ -0.45
CPSF4-203ENST00000430038 SYNGR2O43760 224 aa12.23□□□□□ -0.45
CPSF4-203ENST00000430038 NOL3O60936 208 aaKnown RBP12.23□□□□□ -0.45
CPSF4-203ENST00000430038 ADAP1O75689 374 aa12.23□□□□□ -0.45
CPSF4-203ENST00000430038 TCTAP57738 103 aa12.23□□□□□ -0.45
CPSF4-203ENST00000430038 BAK1Q16611 211 aa12.23□□□□□ -0.45
CPSF4-203ENST00000430038 SLC25A21Q9BQT8 299 aaPredicted RBP12.23□□□□□ -0.45
CPSF4-203ENST00000430038 PAIP2BQ9ULR5 123 aaKnown RBP12.23□□□□□ -0.45
CPSF4-203ENST00000430038 FLVCR2Q9UPI3 526 aa12.23□□□□□ -0.45
CPSF4-203ENST00000430038 H3BP45 60 aa12.22□□□□□ -0.45
CPSF4-203ENST00000430038 FAUP35544 74 aaKnown RBP12.22□□□□□ -0.45
CPSF4-203ENST00000430038 C1orf194Q5T5A4 169 aa12.22□□□□□ -0.45
CPSF4-203ENST00000430038 C1orf158Q8N1D5 194 aa12.22□□□□□ -0.45
CPSF4-203ENST00000430038 SDHCQ99643 169 aaPredicted RBP12.22□□□□□ -0.45
CPSF4-203ENST00000430038 SRRQ9GZT4 340 aa12.22□□□□□ -0.45
CPSF4-203ENST00000430038 SLC25A32Q9H2D1 315 aa12.22□□□□□ -0.45
CPSF4-203ENST00000430038 TMED3Q9Y3Q3 217 aa12.22□□□□□ -0.45
CPSF4-203ENST00000430038 DEFB131BA0A096LNP1 70 aa12.21□□□□□ -0.45
CPSF4-203ENST00000430038 CCNKO75909 580 aa12.21□□□□□ -0.45
CPSF4-203ENST00000430038 AP3S2P59780 193 aa12.21□□□□□ -0.45
CPSF4-203ENST00000430038 NUTF2P61970 127 aaKnown RBP12.21□□□□□ -0.45
CPSF4-203ENST00000430038 RAB11AP62491 216 aa12.21□□□□□ -0.45
CPSF4-203ENST00000430038 IGFL4Q6B9Z1 124 aa12.21□□□□□ -0.45
CPSF4-203ENST00000430038 FOXI2Q6ZQN5 318 aa12.21□□□□□ -0.45
CPSF4-203ENST00000430038 NEU1Q99519 415 aa12.21□□□□□ -0.45
CPSF4-203ENST00000430038 C1QTNF4Q9BXJ3 329 aa12.21□□□□□ -0.45
CPSF4-203ENST00000430038 IGHV3OR16-12A0A075B7B8 117 aa12.2□□□□□ -0.46
CPSF4-203ENST00000430038 A0A0J9YX75 114 aa12.2□□□□□ -0.46
CPSF4-203ENST00000430038 C9orf170A2RU37 121 aa12.2□□□□□ -0.46
CPSF4-203ENST00000430038 PMS2P5A8MQ11 134 aa12.2□□□□□ -0.46
CPSF4-203ENST00000430038 PRM2P04554 102 aa12.2□□□□□ -0.46
CPSF4-203ENST00000430038 PSMB3P49720 205 aa12.2□□□□□ -0.46
CPSF4-203ENST00000430038 EMP1P54849 157 aa12.2□□□□□ -0.46
CPSF4-203ENST00000430038 ID3Q02535 119 aa12.2□□□□□ -0.46
CPSF4-203ENST00000430038 SPANXN5Q5MJ07 72 aa12.2□□□□□ -0.46
CPSF4-203ENST00000430038 FAM78BQ5VT40 261 aa12.2□□□□□ -0.46
CPSF4-203ENST00000430038 OR8I2Q8N0Y5 310 aa12.2□□□□□ -0.46
CPSF4-203ENST00000430038 CENPSQ8N2Z9 138 aa12.2□□□□□ -0.46
CPSF4-203ENST00000430038 OR4B1Q8NGF8 309 aa12.2□□□□□ -0.46
CPSF4-203ENST00000430038 CLUHP3Q96NS8 147 aa12.2□□□□□ -0.46
CPSF4-203ENST00000430038 RNF126Q9BV68 326 aa12.2□□□□□ -0.46
CPSF4-203ENST00000430038 PKHD1P08F94 4074 aa12.2□□□□□ -0.46
CPSF4-203ENST00000430038 ZNF98A6NK75 572 aa12.19□□□□□ -0.46
CPSF4-203ENST00000430038 PAX9P55771 341 aa12.19□□□□□ -0.46
CPSF4-203ENST00000430038 POLR2GP62487 172 aaKnown RBP eCLIP12.19□□□□□ -0.46
CPSF4-203ENST00000430038 AMTNQ6UX39 209 aa12.19□□□□□ -0.46
CPSF4-203ENST00000430038 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.19□□□□□ -0.46
CPSF4-203ENST00000430038 RSG1Q9BU20 258 aa12.19□□□□□ -0.46
CPSF4-203ENST00000430038 SLC25A22Q9H936 323 aa12.19□□□□□ -0.46
CPSF4-203ENST00000430038 TRAV8-2A0A0B4J237 113 aa12.18□□□□□ -0.46
CPSF4-203ENST00000430038 CCDC160A6NGH7 325 aa12.18□□□□□ -0.46
CPSF4-203ENST00000430038 A8MTW9 85 aa12.18□□□□□ -0.46
CPSF4-203ENST00000430038 ISLRO14498 428 aa12.18□□□□□ -0.46
CPSF4-203ENST00000430038 MED6O75586 246 aa12.18□□□□□ -0.46
CPSF4-203ENST00000430038 AMBPP02760 352 aa12.18□□□□□ -0.46
CPSF4-203ENST00000430038 PRB4P10163 310 aaPredicted RBP12.18□□□□□ -0.46
CPSF4-203ENST00000430038 ORM2P19652 201 aa12.18□□□□□ -0.46
CPSF4-203ENST00000430038 BTCP35070 178 aa12.18□□□□□ -0.46
CPSF4-203ENST00000430038 NUP62P37198 522 aaPredicted RBP12.18□□□□□ -0.46
CPSF4-203ENST00000430038 ID1P41134 155 aa12.18□□□□□ -0.46
CPSF4-203ENST00000430038 ACOT7LQ6ZUV0 252 aa12.18□□□□□ -0.46
CPSF4-203ENST00000430038 OR4D5Q8NGN0 318 aa12.18□□□□□ -0.46
CPSF4-203ENST00000430038 PPP1R14BQ96C90 147 aa12.18□□□□□ -0.46
CPSF4-203ENST00000430038 PKD1P98161 4303 aa12.18□□□□□ -0.46
CPSF4-203ENST00000430038 NACAE9PAV3 2078 aa12.17□□□□□ -0.46
CPSF4-203ENST00000430038 NDUFB6O95139 128 aa12.17□□□□□ -0.46
CPSF4-203ENST00000430038 S100A5P33763 92 aa12.17□□□□□ -0.46
CPSF4-203ENST00000430038 PSG9Q00887 426 aa12.17□□□□□ -0.46
CPSF4-203ENST00000430038 COQ8AQ8NI60 647 aa12.17□□□□□ -0.46
CPSF4-203ENST00000430038 DEDD2Q8WXF8 326 aa12.17□□□□□ -0.46
CPSF4-203ENST00000430038 CIB3Q96Q77 187 aaPredicted RBP12.17□□□□□ -0.46
CPSF4-203ENST00000430038 LINC00854A0A1B0GVQ3 168 aa12.16□□□□□ -0.46
CPSF4-203ENST00000430038 FABP1P07148 127 aa12.16□□□□□ -0.46
CPSF4-203ENST00000430038 RNF182Q8N6D2 247 aa12.16□□□□□ -0.46
CPSF4-203ENST00000430038 OR1B1Q8NGR6 318 aa12.16□□□□□ -0.46
CPSF4-203ENST00000430038 C16orf92Q96LL3 132 aa12.16□□□□□ -0.46
CPSF4-203ENST00000430038 DOK5Q9P104 306 aa12.16□□□□□ -0.46
CPSF4-203ENST00000430038 DKK2Q9UBU2 259 aa12.16□□□□□ -0.46
CPSF4-203ENST00000430038 PFDN2Q9UHV9 154 aa12.16□□□□□ -0.46
CPSF4-203ENST00000430038 CRXO43186 299 aaPredicted RBP12.15□□□□□ -0.46
CPSF4-203ENST00000430038 SPART-AS1P0CW21 52 aa12.15□□□□□ -0.46
CPSF4-203ENST00000430038 ANXA7P20073 488 aaKnown RBP12.15□□□□□ -0.46
CPSF4-203ENST00000430038 FAM222AQ5U5X8 452 aa12.15□□□□□ -0.46
CPSF4-203ENST00000430038 TMEM144Q7Z5S9 345 aa12.15□□□□□ -0.46
CPSF4-203ENST00000430038 STRAPQ9Y3F4 350 aaKnown RBP12.15□□□□□ -0.46
CPSF4-203ENST00000430038 PCLOQ9Y6V0 5065 aa12.14□□□□□ -0.47
CPSF4-203ENST00000430038 DYNC1H1Q14204 4646 aaKnown RBP12.14□□□□□ -0.47
CPSF4-203ENST00000430038 PIGBOS1A0A0B4J2F0 54 aa12.14□□□□□ -0.47
CPSF4-203ENST00000430038 SMIM9A6NGZ8 99 aa12.14□□□□□ -0.47
CPSF4-203ENST00000430038 H3BRN7 92 aa12.14□□□□□ -0.47
CPSF4-203ENST00000430038 OR4E1P0C645 316 aa12.14□□□□□ -0.47
CPSF4-203ENST00000430038 UBE2MP61081 183 aaKnown RBP12.14□□□□□ -0.47
CPSF4-203ENST00000430038 AKR1C1Q04828 323 aa12.14□□□□□ -0.47
CPSF4-203ENST00000430038 ARL16Q0P5N6 197 aa12.14□□□□□ -0.47
CPSF4-203ENST00000430038 PATE2Q6UY27 113 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 101.7 ms