RNA–Protein interactions for RNA: ENST00000429747.5

CPNE4-201, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 4,184 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-201ENST00000429747 IGLC3P0DOY3 106 aa10.25□□□□□ -0.77
CPNE4-201ENST00000429747 TPTE2P1Q5T6R2 138 aa10.25□□□□□ -0.77
CPNE4-201ENST00000429747 LYPD2Q6UXB3 125 aa10.25□□□□□ -0.77
CPNE4-201ENST00000429747 C8orf46Q8TAG6 207 aa10.25□□□□□ -0.77
CPNE4-201ENST00000429747 PEF1Q9UBV8 284 aaKnown RBP10.25□□□□□ -0.77
CPNE4-201ENST00000429747 LSM4Q9Y4Z0 139 aaKnown RBP10.25□□□□□ -0.77
CPNE4-201ENST00000429747 SPRNQ5BIV9 151 aa10.25□□□□□ -0.77
CPNE4-201ENST00000429747 FAM168AQ92567 244 aa10.25□□□□□ -0.77
CPNE4-201ENST00000429747 RNASE6Q93091 150 aaKnown RBP10.25□□□□□ -0.77
CPNE4-201ENST00000429747 ABHD17AQ96GS6 310 aa10.25□□□□□ -0.77
CPNE4-201ENST00000429747 DPM3Q9P2X0 92 aa10.25□□□□□ -0.77
CPNE4-201ENST00000429747 TRAV30A0A087WSZ9 112 aa10.25□□□□□ -0.77
CPNE4-201ENST00000429747 IGHV3-66A0A0C4DH42 116 aa10.25□□□□□ -0.77
CPNE4-201ENST00000429747 A0A1W2PPI3 338 aa10.25□□□□□ -0.77
CPNE4-201ENST00000429747 A1L4Q6 167 aa10.25□□□□□ -0.77
CPNE4-201ENST00000429747 MBD3L4A6NDZ8 208 aaPredicted RBP10.25□□□□□ -0.77
CPNE4-201ENST00000429747 MBD3L3A6NE82 208 aaPredicted RBP10.25□□□□□ -0.77
CPNE4-201ENST00000429747 MBD3L5A6NJ08 208 aaPredicted RBP10.25□□□□□ -0.77
CPNE4-201ENST00000429747 APOBEC3AP31941 199 aaPredicted RBP10.25□□□□□ -0.77
CPNE4-201ENST00000429747 TEX43Q6ZNM6 134 aa10.25□□□□□ -0.77
CPNE4-201ENST00000429747 MBD3L2Q8NHZ7 208 aaPredicted RBP10.25□□□□□ -0.77
CPNE4-201ENST00000429747 RABAC1Q9UI14 185 aa10.25□□□□□ -0.77
CPNE4-201ENST00000429747 B9A039 149 aa10.24□□□□□ -0.77
CPNE4-201ENST00000429747 ITGB1BP1O14713 200 aa10.24□□□□□ -0.77
CPNE4-201ENST00000429747 GPR183P32249 361 aa10.24□□□□□ -0.77
CPNE4-201ENST00000429747 DLX1P56177 255 aa10.24□□□□□ -0.77
CPNE4-201ENST00000429747 TMEM249Q2WGJ8 235 aa10.24□□□□□ -0.77
CPNE4-201ENST00000429747 TMEM78Q5T7P6 136 aa10.24□□□□□ -0.77
CPNE4-201ENST00000429747 RNF125Q96EQ8 232 aa10.24□□□□□ -0.77
CPNE4-201ENST00000429747 KIR2DL5BA0A0G2JN68 375 aa10.24□□□□□ -0.77
CPNE4-201ENST00000429747 KIR2DL5BA0A0G2JPC4 375 aa10.24□□□□□ -0.77
CPNE4-201ENST00000429747 MGPP08493 103 aa10.24□□□□□ -0.77
CPNE4-201ENST00000429747 KLF17Q5JT82 389 aaPredicted RBP10.24□□□□□ -0.77
CPNE4-201ENST00000429747 RASL11AQ6T310 242 aa10.24□□□□□ -0.77
CPNE4-201ENST00000429747 SCGB1D4Q6XE38 83 aa10.24□□□□□ -0.77
CPNE4-201ENST00000429747 KIR2DL5AQ8N109 375 aa10.24□□□□□ -0.77
CPNE4-201ENST00000429747 KLK15Q9H2R5 256 aa10.24□□□□□ -0.77
CPNE4-201ENST00000429747 DAZAP2Q15038 168 aaPredicted RBP10.24□□□□□ -0.77
CPNE4-201ENST00000429747 LDLRAD2Q5SZI1 272 aa10.24□□□□□ -0.77
CPNE4-201ENST00000429747 ORMDL3Q8N138 153 aa10.24□□□□□ -0.77
CPNE4-201ENST00000429747 Q8TCH9 128 aa10.24□□□□□ -0.77
CPNE4-201ENST00000429747 TMEM178BH3BS89 294 aa10.23□□□□□ -0.77
CPNE4-201ENST00000429747 FABP2P12104 132 aa10.23□□□□□ -0.77
CPNE4-201ENST00000429747 BRWD1-AS2P59051 145 aa10.23□□□□□ -0.77
CPNE4-201ENST00000429747 WT1-ASQ06250 92 aa10.23□□□□□ -0.77
CPNE4-201ENST00000429747 SAPCD1Q5SSQ6 148 aa10.23□□□□□ -0.77
CPNE4-201ENST00000429747 ST20Q9HBF5 79 aa10.23□□□□□ -0.77
CPNE4-201ENST00000429747 NDUFA4L2Q9NRX3 87 aa10.23□□□□□ -0.77
CPNE4-201ENST00000429747 PRRC2CQ9Y520 2896 aaKnown RBP10.23□□□□□ -0.77
CPNE4-201ENST00000429747 IGHV1-8P0DP01 117 aa10.23□□□□□ -0.77
CPNE4-201ENST00000429747 TMPRSS3P57727 454 aa10.23□□□□□ -0.77
CPNE4-201ENST00000429747 FXYD7P58549 80 aa10.23□□□□□ -0.77
CPNE4-201ENST00000429747 PSG9Q00887 426 aa10.23□□□□□ -0.77
CPNE4-201ENST00000429747 SPACA3Q8IXA5 215 aa10.23□□□□□ -0.77
CPNE4-201ENST00000429747 CHCHD1Q96BP2 118 aaKnown RBP10.23□□□□□ -0.77
CPNE4-201ENST00000429747 SLC25A2Q9BXI2 301 aa10.23□□□□□ -0.77
CPNE4-201ENST00000429747 SLC25A39Q9BZJ4 359 aaPredicted RBP10.23□□□□□ -0.77
CPNE4-201ENST00000429747 C21orf62Q9NYP8 219 aa10.23□□□□□ -0.77
CPNE4-201ENST00000429747 WISP2O76076 250 aa10.23□□□□□ -0.77
CPNE4-201ENST00000429747 IGLV1-44P01699 117 aa10.23□□□□□ -0.77
CPNE4-201ENST00000429747 MAJINQ3KP22 176 aa10.23□□□□□ -0.77
CPNE4-201ENST00000429747 PET117Q6UWS5 81 aa10.23□□□□□ -0.77
CPNE4-201ENST00000429747 SYS1-DBNDD2H3BUS1 97 aa10.22□□□□□ -0.77
CPNE4-201ENST00000429747 TIMM23O14925 209 aa10.22□□□□□ -0.77
CPNE4-201ENST00000429747 LOC105371242A0A075B767 164 aa10.22□□□□□ -0.77
CPNE4-201ENST00000429747 A0A087X0K7 114 aa10.22□□□□□ -0.77
CPNE4-201ENST00000429747 M0R3E3 92 aa10.22□□□□□ -0.77
CPNE4-201ENST00000429747 ZNF207O43670 478 aaKnown RBP10.22□□□□□ -0.77
CPNE4-201ENST00000429747 PLP1P60201 277 aa10.22□□□□□ -0.77
CPNE4-201ENST00000429747 CACNG7P62955 275 aa10.22□□□□□ -0.77
CPNE4-201ENST00000429747 DIAPH2-AS1Q14236 149 aa10.22□□□□□ -0.77
CPNE4-201ENST00000429747 TRGV9Q99603 122 aa10.22□□□□□ -0.77
CPNE4-201ENST00000429747 NAA38Q9BRA0 125 aaKnown RBP10.22□□□□□ -0.77
CPNE4-201ENST00000429747 RPS20P60866 119 aaKnown RBP10.22□□□□□ -0.77
CPNE4-201ENST00000429747 ADIPOQQ15848 244 aa10.22□□□□□ -0.77
CPNE4-201ENST00000429747 AMMECR1LQ6DCA0 310 aa10.22□□□□□ -0.77
CPNE4-201ENST00000429747 STPG4Q8N801 248 aa10.22□□□□□ -0.77
CPNE4-201ENST00000429747 PPIFP30405 207 aaKnown RBP10.22□□□□□ -0.77
CPNE4-201ENST00000429747 SSBP2P81877 361 aaPredicted RBP10.22□□□□□ -0.77
CPNE4-201ENST00000429747 OR5AN1Q8NGI8 311 aa10.22□□□□□ -0.77
CPNE4-201ENST00000429747 TPSG1Q9NRR2 321 aa10.22□□□□□ -0.77
CPNE4-201ENST00000429747 UNC80Q8N2C7 3258 aa10.21□□□□□ -0.77
CPNE4-201ENST00000429747 IGHV2-26A0A0B4J1V2 119 aa10.21□□□□□ -0.77
CPNE4-201ENST00000429747 CFHR2P36980 270 aa10.21□□□□□ -0.77
CPNE4-201ENST00000429747 MRPL52Q86TS9 123 aaKnown RBP10.21□□□□□ -0.77
CPNE4-201ENST00000429747 FER1L6-AS1Q8NA97 138 aa10.21□□□□□ -0.77
CPNE4-201ENST00000429747 TECTAO75443 2155 aa10.21□□□□□ -0.77
CPNE4-201ENST00000429747 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.21□□□□□ -0.78
CPNE4-201ENST00000429747 H3BUT2 72 aa10.21□□□□□ -0.78
CPNE4-201ENST00000429747 PROP1O75360 226 aa10.21□□□□□ -0.78
CPNE4-201ENST00000429747 TRAV8-6A0A0B4J262 113 aa10.21□□□□□ -0.78
CPNE4-201ENST00000429747 A0A1W2PNU3 283 aaPredicted RBP10.21□□□□□ -0.78
CPNE4-201ENST00000429747 SMIM27A0A1W2PRY6 76 aa10.21□□□□□ -0.78
CPNE4-201ENST00000429747 SCGB1C2P0DMR2 95 aa10.21□□□□□ -0.78
CPNE4-201ENST00000429747 SRSF9Q13242 221 aaKnown RBP eCLIP10.21□□□□□ -0.78
CPNE4-201ENST00000429747 Q6ZVH6 145 aa10.21□□□□□ -0.78
CPNE4-201ENST00000429747 C16orf92Q96LL3 132 aa10.21□□□□□ -0.78
CPNE4-201ENST00000429747 FNDC4Q9H6D8 234 aaPredicted RBP10.21□□□□□ -0.78
CPNE4-201ENST00000429747 UBTD1Q9HAC8 227 aa10.21□□□□□ -0.78
CPNE4-201ENST00000429747 TMEM160Q9NX00 188 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms