RNA–Protein interactions for RNA: ENST00000428868.1

SMC6-204, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 4

Gene SMC6, Length 544 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-204ENST00000428868 NDUFA7O95182 113 aa6.82□□□□□ -1.32
SMC6-204ENST00000428868 OR2C1O95371 312 aa6.82□□□□□ -1.32
SMC6-204ENST00000428868 HSPB1P04792 205 aaKnown RBP6.82□□□□□ -1.32
SMC6-204ENST00000428868 CRYBA1P05813 215 aa6.82□□□□□ -1.32
SMC6-204ENST00000428868 PYYP10082 97 aa6.82□□□□□ -1.32
SMC6-204ENST00000428868 CD28P10747 220 aa6.82□□□□□ -1.32
SMC6-204ENST00000428868 RPL15P61313 204 aaKnown RBP6.82□□□□□ -1.32
SMC6-204ENST00000428868 RHOBP62745 196 aa6.82□□□□□ -1.32
SMC6-204ENST00000428868 HAGHQ16775 308 aa6.82□□□□□ -1.32
SMC6-204ENST00000428868 DEFB136Q30KP8 78 aa6.82□□□□□ -1.32
SMC6-204ENST00000428868 TOR2AQ5JU69 321 aa6.82□□□□□ -1.32
SMC6-204ENST00000428868 UNQ9165/PRO28630Q6UXU0 137 aa6.82□□□□□ -1.32
SMC6-204ENST00000428868 ZNF600Q6ZNG1 722 aa6.82□□□□□ -1.32
SMC6-204ENST00000428868 LINC00305Q7Z4B0 112 aa6.82□□□□□ -1.32
SMC6-204ENST00000428868 OR1L4Q8NGR5 311 aa6.82□□□□□ -1.32
SMC6-204ENST00000428868 CITED4Q96RK1 184 aa6.82□□□□□ -1.32
SMC6-204ENST00000428868 JMJD8Q96S16 334 aa6.82□□□□□ -1.32
SMC6-204ENST00000428868 RARRES2Q99969 163 aa6.82□□□□□ -1.32
SMC6-204ENST00000428868 MRPL27Q9P0M9 148 aaKnown RBP6.82□□□□□ -1.32
SMC6-204ENST00000428868 PFDN2Q9UHV9 154 aa6.82□□□□□ -1.32
SMC6-204ENST00000428868 HIGD1AQ9Y241 93 aa6.82□□□□□ -1.32
SMC6-204ENST00000428868 IGHV3OR16-13A0A075B7E8 117 aa6.81□□□□□ -1.32
SMC6-204ENST00000428868 IGHV3-49A0A0A0MS15 119 aa6.81□□□□□ -1.32
SMC6-204ENST00000428868 IGHV3-74A0A0B4J1X5 117 aa6.81□□□□□ -1.32
SMC6-204ENST00000428868 TRAV1-1A0A0B4J248 108 aa6.81□□□□□ -1.32
SMC6-204ENST00000428868 A0A0G2JLM5 398 aa6.81□□□□□ -1.32
SMC6-204ENST00000428868 A0A1W2PPV4 95 aa6.81□□□□□ -1.32
SMC6-204ENST00000428868 APOHP02749 345 aaPredicted RBP6.81□□□□□ -1.32
SMC6-204ENST00000428868 LGALS1P09382 135 aaKnown RBP6.81□□□□□ -1.32
SMC6-204ENST00000428868 OR10J4P0C629 311 aa6.81□□□□□ -1.32
SMC6-204ENST00000428868 GCHFRP30047 84 aa6.81□□□□□ -1.32
SMC6-204ENST00000428868 IL34Q6ZMJ4 242 aa6.81□□□□□ -1.32
SMC6-204ENST00000428868 IQCF2Q8IXL9 164 aa6.81□□□□□ -1.32
SMC6-204ENST00000428868 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.81□□□□□ -1.32
SMC6-204ENST00000428868 Q8WTZ3 238 aa6.81□□□□□ -1.32
SMC6-204ENST00000428868 MARC2Q969Z3 335 aa6.81□□□□□ -1.32
SMC6-204ENST00000428868 FAM210AQ96ND0 272 aa6.81□□□□□ -1.32
SMC6-204ENST00000428868 DUX3Q96PT4 197 aa6.81□□□□□ -1.32
SMC6-204ENST00000428868 PFDN5Q99471 154 aa6.81□□□□□ -1.32
SMC6-204ENST00000428868 MRPL32Q9BYC8 188 aaKnown RBP6.81□□□□□ -1.32
SMC6-204ENST00000428868 SLC25A39Q9BZJ4 359 aaPredicted RBP6.81□□□□□ -1.32
SMC6-204ENST00000428868 SELENOKQ9Y6D0 94 aa6.81□□□□□ -1.32
SMC6-204ENST00000428868 IGHV3-66A0A0C4DH42 116 aa6.8□□□□□ -1.32
SMC6-204ENST00000428868 LOC102723971A0A1B0GUV8 181 aa6.8□□□□□ -1.32
SMC6-204ENST00000428868 H3BTX0 84 aa6.8□□□□□ -1.32
SMC6-204ENST00000428868 I3L521 148 aa6.8□□□□□ -1.32
SMC6-204ENST00000428868 MRPS12O15235 138 aaKnown RBP6.8□□□□□ -1.32
SMC6-204ENST00000428868 C8orf88P0DMB2 117 aa6.8□□□□□ -1.32
SMC6-204ENST00000428868 GP9P14770 177 aa6.8□□□□□ -1.32
SMC6-204ENST00000428868 PROK1P58294 105 aa6.8□□□□□ -1.32
SMC6-204ENST00000428868 UBE2G2P60604 165 aa6.8□□□□□ -1.32
SMC6-204ENST00000428868 ICAM4Q14773 271 aa6.8□□□□□ -1.32
SMC6-204ENST00000428868 NDUFA5Q16718 116 aa6.8□□□□□ -1.32
SMC6-204ENST00000428868 GUK1Q16774 197 aa6.8□□□□□ -1.32
SMC6-204ENST00000428868 KHDC1LQ5JSQ8 128 aa6.8□□□□□ -1.32
SMC6-204ENST00000428868 FXYD5Q96DB9 178 aa6.8□□□□□ -1.32
SMC6-204ENST00000428868 UBE2E2Q96LR5 201 aa6.8□□□□□ -1.32
SMC6-204ENST00000428868 ATP6V0BQ99437 205 aa6.8□□□□□ -1.32
SMC6-204ENST00000428868 SHANK2-AS3Q9BTD1 123 aa6.8□□□□□ -1.32
SMC6-204ENST00000428868 TECRQ9NZ01 308 aaKnown RBP6.8□□□□□ -1.32
SMC6-204ENST00000428868 GNG13Q9P2W3 67 aa6.8□□□□□ -1.32
SMC6-204ENST00000428868 PEF1Q9UBV8 284 aaKnown RBP6.8□□□□□ -1.32
SMC6-204ENST00000428868 RNF114Q9Y508 228 aa6.8□□□□□ -1.32
SMC6-204ENST00000428868 YTHDF2Q9Y5A9 579 aaKnown RBP6.8□□□□□ -1.32
SMC6-204ENST00000428868 CMYA5Q8N3K9 4069 aa6.8□□□□□ -1.32
SMC6-204ENST00000428868 ELOA3CA0A087WX78 387 aaPredicted RBP6.79□□□□□ -1.32
SMC6-204ENST00000428868 A0A1W2PRX2 142 aa6.79□□□□□ -1.32
SMC6-204ENST00000428868 RAB19A4D1S5 217 aa6.79□□□□□ -1.32
SMC6-204ENST00000428868 RBFOX3A6NFN3 312 aa6.79□□□□□ -1.32
SMC6-204ENST00000428868 ZNF98A6NK75 572 aa6.79□□□□□ -1.32
SMC6-204ENST00000428868 OR7C2O60412 319 aa6.79□□□□□ -1.32
SMC6-204ENST00000428868 PAGE4O60829 102 aa6.79□□□□□ -1.32
SMC6-204ENST00000428868 CXorf1O96002 111 aa6.79□□□□□ -1.32
SMC6-204ENST00000428868 HBE1P02100 147 aa6.79□□□□□ -1.32
SMC6-204ENST00000428868 FABP1P07148 127 aa6.79□□□□□ -1.32
SMC6-204ENST00000428868 PRB4P10163 310 aaPredicted RBP6.79□□□□□ -1.32
SMC6-204ENST00000428868 ADCYAP1P18509 176 aa6.79□□□□□ -1.32
SMC6-204ENST00000428868 ATP5G3P48201 142 aa6.79□□□□□ -1.32
SMC6-204ENST00000428868 SLURP1P55000 103 aa6.79□□□□□ -1.32
SMC6-204ENST00000428868 KHDC3LQ587J8 217 aa6.79□□□□□ -1.32
SMC6-204ENST00000428868 C8orf86Q6ZUL3 223 aa6.79□□□□□ -1.32
SMC6-204ENST00000428868 KLHL30-AS1Q8NEE0 82 aa6.79□□□□□ -1.32
SMC6-204ENST00000428868 RXFP4Q8TDU9 374 aa6.79□□□□□ -1.32
SMC6-204ENST00000428868 TMEM190Q8WZ59 177 aa6.79□□□□□ -1.32
SMC6-204ENST00000428868 C17orf77Q96MU5 243 aa6.79□□□□□ -1.32
SMC6-204ENST00000428868 LINC00052Q96N35 136 aa6.79□□□□□ -1.32
SMC6-204ENST00000428868 RNF2Q99496 336 aa6.79□□□□□ -1.32
SMC6-204ENST00000428868 CITED2Q99967 270 aaPredicted RBP6.79□□□□□ -1.32
SMC6-204ENST00000428868 C20orf24Q9BUV8 137 aa6.79□□□□□ -1.32
SMC6-204ENST00000428868 GAR1Q9NY12 217 aaKnown RBP6.79□□□□□ -1.32
SMC6-204ENST00000428868 TENM1Q9UKZ4 2725 aa6.79□□□□□ -1.32
SMC6-204ENST00000428868 JMJD1CQ15652 2540 aa6.78□□□□□ -1.32
SMC6-204ENST00000428868 ADARB2-AS1A8MUL3 147 aa6.78□□□□□ -1.32
SMC6-204ENST00000428868 H3BQ15 152 aa6.78□□□□□ -1.32
SMC6-204ENST00000428868 NDUFA4O00483 81 aa6.78□□□□□ -1.32
SMC6-204ENST00000428868 GGCTO75223 188 aaKnown RBP6.78□□□□□ -1.32
SMC6-204ENST00000428868 CD5P06127 495 aa6.78□□□□□ -1.32
SMC6-204ENST00000428868 BCL2P10415 239 aa6.78□□□□□ -1.32
SMC6-204ENST00000428868 CDX1P47902 265 aaPredicted RBP6.78□□□□□ -1.32
SMC6-204ENST00000428868 UBE2L3P68036 154 aaKnown RBP6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 110.5 ms