RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 HYPMO75409 117 aa10.94□□□□□ -0.66
SGCE-204ENST00000428696 CD7P09564 240 aa10.94□□□□□ -0.66
SGCE-204ENST00000428696 AP2S1P53680 142 aaPredicted RBP10.94□□□□□ -0.66
SGCE-204ENST00000428696 ZNF546Q86UE3 836 aa10.94□□□□□ -0.66
SGCE-204ENST00000428696 STXBP6Q8NFX7 210 aa10.94□□□□□ -0.66
SGCE-204ENST00000428696 CHAC2Q8WUX2 184 aa10.94□□□□□ -0.66
SGCE-204ENST00000428696 MGST2Q99735 147 aa10.94□□□□□ -0.66
SGCE-204ENST00000428696 VSIRQ9H7M9 311 aa10.94□□□□□ -0.66
SGCE-204ENST00000428696 UBQLN2Q9UHD9 624 aa10.94□□□□□ -0.66
SGCE-204ENST00000428696 SMAD5-AS1Q9Y6J3 95 aa10.94□□□□□ -0.66
SGCE-204ENST00000428696 SORL1Q92673 2214 aa10.94□□□□□ -0.66
SGCE-204ENST00000428696 OR4C46A6NHA9 309 aa10.93□□□□□ -0.66
SGCE-204ENST00000428696 SMLR1H3BR10 107 aa10.93□□□□□ -0.66
SGCE-204ENST00000428696 TSPAN4O14817 238 aa10.93□□□□□ -0.66
SGCE-204ENST00000428696 OR8I2Q8N0Y5 310 aa10.93□□□□□ -0.66
SGCE-204ENST00000428696 ZNF709Q8N972 641 aa10.93□□□□□ -0.66
SGCE-204ENST00000428696 INO80EQ8NBZ0 244 aaPredicted RBP10.93□□□□□ -0.66
SGCE-204ENST00000428696 SCGB1C1Q8TD33 95 aa10.93□□□□□ -0.66
SGCE-204ENST00000428696 ASB13Q8WXK3 278 aa10.93□□□□□ -0.66
SGCE-204ENST00000428696 SPAG8Q99932 426 aaPredicted RBP10.93□□□□□ -0.66
SGCE-204ENST00000428696 SLC45A2Q9UMX9 530 aa10.93□□□□□ -0.66
SGCE-204ENST00000428696 WDR83OSQ9Y284 106 aa10.93□□□□□ -0.66
SGCE-204ENST00000428696 HSPB11Q9Y547 144 aa10.93□□□□□ -0.66
SGCE-204ENST00000428696 COX7A2P2O60397 106 aa10.92□□□□□ -0.66
SGCE-204ENST00000428696 IFNA5P01569 189 aa10.92□□□□□ -0.66
SGCE-204ENST00000428696 CD5P06127 495 aa10.92□□□□□ -0.66
SGCE-204ENST00000428696 MIC13Q5XKP0 118 aa10.92□□□□□ -0.66
SGCE-204ENST00000428696 LEMD1Q68G75 181 aa10.92□□□□□ -0.66
SGCE-204ENST00000428696 C16orf54Q6UWD8 224 aa10.92□□□□□ -0.66
SGCE-204ENST00000428696 Q6ZRG5 221 aa10.92□□□□□ -0.66
SGCE-204ENST00000428696 MS4A6AQ9H2W1 248 aa10.92□□□□□ -0.66
SGCE-204ENST00000428696 HIGD1AQ9Y241 93 aa10.92□□□□□ -0.66
SGCE-204ENST00000428696 LSM4Q9Y4Z0 139 aaKnown RBP10.92□□□□□ -0.66
SGCE-204ENST00000428696 HELTA6NFD8 242 aa10.92□□□□□ -0.66
SGCE-204ENST00000428696 OR11H12B2RN74 326 aa10.92□□□□□ -0.66
SGCE-204ENST00000428696 BUB3O43684 328 aa10.92□□□□□ -0.66
SGCE-204ENST00000428696 S100A7P31151 101 aa10.92□□□□□ -0.66
SGCE-204ENST00000428696 VWC2Q2TAL6 325 aa10.92□□□□□ -0.66
SGCE-204ENST00000428696 Q8N1Y9 231 aa10.92□□□□□ -0.66
SGCE-204ENST00000428696 DEFB125Q8N687 156 aa10.92□□□□□ -0.66
SGCE-204ENST00000428696 ATP5SQ99766 215 aa10.92□□□□□ -0.66
SGCE-204ENST00000428696 WFDC10AQ9H1F0 79 aa10.92□□□□□ -0.66
SGCE-204ENST00000428696 U3KQE9 123 aa10.92□□□□□ -0.66
SGCE-204ENST00000428696 LYL1P12980 280 aa10.91□□□□□ -0.66
SGCE-204ENST00000428696 FAM90A2PQ658T7 463 aa10.91□□□□□ -0.66
SGCE-204ENST00000428696 SIGLEC15Q6ZMC9 328 aa10.91□□□□□ -0.66
SGCE-204ENST00000428696 STPG3Q8N7X2 389 aa10.91□□□□□ -0.66
SGCE-204ENST00000428696 UHRF2Q96PU4 802 aa10.91□□□□□ -0.66
SGCE-204ENST00000428696 SCRT1Q9BWW7 348 aa10.91□□□□□ -0.66
SGCE-204ENST00000428696 GGTLC1Q9BX51 225 aa10.91□□□□□ -0.66
SGCE-204ENST00000428696 IGHV4-30-4P0DP06 118 aa10.9□□□□□ -0.66
SGCE-204ENST00000428696 Q6ZNX1 250 aa10.9□□□□□ -0.66
SGCE-204ENST00000428696 S100A7AQ86SG5 101 aa10.9□□□□□ -0.66
SGCE-204ENST00000428696 GLMPQ8WWB7 406 aa10.9□□□□□ -0.66
SGCE-204ENST00000428696 ASCL2Q99929 193 aa10.9□□□□□ -0.66
SGCE-204ENST00000428696 SLC25A39Q9BZJ4 359 aaPredicted RBP10.9□□□□□ -0.66
SGCE-204ENST00000428696 ARV1Q9H2C2 271 aa10.9□□□□□ -0.66
SGCE-204ENST00000428696 PXMP4Q9Y6I8 212 aa10.9□□□□□ -0.66
SGCE-204ENST00000428696 ZNF98A6NK75 572 aa10.89□□□□□ -0.67
SGCE-204ENST00000428696 MPDU1O75352 247 aa10.89□□□□□ -0.67
SGCE-204ENST00000428696 B2MP61769 119 aa10.89□□□□□ -0.67
SGCE-204ENST00000428696 C10orf113Q5VZT2 155 aa10.89□□□□□ -0.67
SGCE-204ENST00000428696 RSG1Q9BU20 258 aa10.89□□□□□ -0.67
SGCE-204ENST00000428696 NPCDR1Q9BY65 106 aa10.89□□□□□ -0.67
SGCE-204ENST00000428696 WDR61Q9GZS3 305 aaKnown RBP10.89□□□□□ -0.67
SGCE-204ENST00000428696 WFDC1Q9HC57 220 aa10.89□□□□□ -0.67
SGCE-204ENST00000428696 DNAJC4Q9NNZ3 241 aa10.89□□□□□ -0.67
SGCE-204ENST00000428696 SLC39A9Q9NUM3 307 aa10.89□□□□□ -0.67
SGCE-204ENST00000428696 FBXL17Q9UF56 701 aa10.89□□□□□ -0.67
SGCE-204ENST00000428696 C17orf112F2Z3M2 114 aa10.88□□□□□ -0.67
SGCE-204ENST00000428696 ARPC5O15511 151 aa10.88□□□□□ -0.67
SGCE-204ENST00000428696 RPL29P47914 159 aaKnown RBP10.88□□□□□ -0.67
SGCE-204ENST00000428696 C1orf194Q5T5A4 169 aa10.88□□□□□ -0.67
SGCE-204ENST00000428696 PATE2Q6UY27 113 aa10.88□□□□□ -0.67
SGCE-204ENST00000428696 LINC00305Q7Z4B0 112 aa10.88□□□□□ -0.67
SGCE-204ENST00000428696 APRG1Q8IVJ8 170 aa10.88□□□□□ -0.67
SGCE-204ENST00000428696 SRD5A3Q9H8P0 318 aa10.88□□□□□ -0.67
SGCE-204ENST00000428696 ELOA3CA0A087WX78 387 aaPredicted RBP10.87□□□□□ -0.67
SGCE-204ENST00000428696 FRMD6-AS1P0C7T7 363 aa10.87□□□□□ -0.67
SGCE-204ENST00000428696 ZNF688P0C7X2 276 aa10.87□□□□□ -0.67
SGCE-204ENST00000428696 GALR1P47211 349 aa10.87□□□□□ -0.67
SGCE-204ENST00000428696 OPCMLQ14982 345 aa10.87□□□□□ -0.67
SGCE-204ENST00000428696 PXDC1Q5TGL8 231 aa10.87□□□□□ -0.67
SGCE-204ENST00000428696 OR1L4Q8NGR5 311 aa10.87□□□□□ -0.67
SGCE-204ENST00000428696 LINC00052Q96N35 136 aa10.87□□□□□ -0.67
SGCE-204ENST00000428696 AQP10Q96PS8 301 aa10.87□□□□□ -0.67
SGCE-204ENST00000428696 SHANK2-AS3Q9BTD1 123 aa10.87□□□□□ -0.67
SGCE-204ENST00000428696 SLC25A32Q9H2D1 315 aa10.87□□□□□ -0.67
SGCE-204ENST00000428696 DNAH3Q8TD57 4116 aa10.87□□□□□ -0.67
SGCE-204ENST00000428696 SNRPCP09234 159 aaKnown RBP10.86□□□□□ -0.67
SGCE-204ENST00000428696 CMC4P56277 68 aaPredicted RBP10.86□□□□□ -0.67
SGCE-204ENST00000428696 DEFB131AP59861 70 aa10.86□□□□□ -0.67
SGCE-204ENST00000428696 PLP1P60201 277 aa10.86□□□□□ -0.67
SGCE-204ENST00000428696 PRR20EP86478 221 aa10.86□□□□□ -0.67
SGCE-204ENST00000428696 PRR20CP86479 221 aa10.86□□□□□ -0.67
SGCE-204ENST00000428696 PRR20DP86480 221 aa10.86□□□□□ -0.67
SGCE-204ENST00000428696 PRR20BP86481 221 aa10.86□□□□□ -0.67
SGCE-204ENST00000428696 PRR20AP86496 221 aa10.86□□□□□ -0.67
SGCE-204ENST00000428696 ZNF124Q15973 351 aa10.86□□□□□ -0.67
SGCE-204ENST00000428696 FAM24BQ8N5W8 94 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms