RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 UHRF2Q96PU4 802 aa6.06□□□□□ -1.44
HMGA1P4-201ENST00000428643 DAZ1Q9NQZ3 744 aaKnown RBP6.06□□□□□ -1.44
HMGA1P4-201ENST00000428643 PFDN2Q9UHV9 154 aa6.06□□□□□ -1.44
HMGA1P4-201ENST00000428643 RABAC1Q9UI14 185 aa6.06□□□□□ -1.44
HMGA1P4-201ENST00000428643 CUBNO60494 3623 aa6.06□□□□□ -1.44
HMGA1P4-201ENST00000428643 TENM1Q9UKZ4 2725 aa6.05□□□□□ -1.44
HMGA1P4-201ENST00000428643 IGHV3OR16-13A0A075B7E8 117 aa6.05□□□□□ -1.44
HMGA1P4-201ENST00000428643 ELOA3CA0A087WX78 387 aaPredicted RBP6.05□□□□□ -1.44
HMGA1P4-201ENST00000428643 IGHV3-49A0A0A0MS15 119 aa6.05□□□□□ -1.44
HMGA1P4-201ENST00000428643 IGHV3-74A0A0B4J1X5 117 aa6.05□□□□□ -1.44
HMGA1P4-201ENST00000428643 WI2-2373I1.2A0A1W2PRP0 233 aa6.05□□□□□ -1.44
HMGA1P4-201ENST00000428643 MBP02144 154 aa6.05□□□□□ -1.44
HMGA1P4-201ENST00000428643 M6PRP20645 277 aa6.05□□□□□ -1.44
HMGA1P4-201ENST00000428643 S100A7P31151 101 aa6.05□□□□□ -1.44
HMGA1P4-201ENST00000428643 PLP1P60201 277 aa6.05□□□□□ -1.44
HMGA1P4-201ENST00000428643 KLF5Q13887 457 aaPredicted RBP6.05□□□□□ -1.44
HMGA1P4-201ENST00000428643 TM4SF20Q53R12 229 aa6.05□□□□□ -1.44
HMGA1P4-201ENST00000428643 TMEM41BQ5BJD5 291 aa6.05□□□□□ -1.44
HMGA1P4-201ENST00000428643 FAM74A1Q5RGS3 127 aa6.05□□□□□ -1.44
HMGA1P4-201ENST00000428643 S100A7AQ86SG5 101 aa6.05□□□□□ -1.44
HMGA1P4-201ENST00000428643 OR10G4Q8NGN3 311 aa6.05□□□□□ -1.44
HMGA1P4-201ENST00000428643 OR10G9Q8NGN4 311 aa6.05□□□□□ -1.44
HMGA1P4-201ENST00000428643 OR10G7Q8NGN6 311 aa6.05□□□□□ -1.44
HMGA1P4-201ENST00000428643 FAM213BQ8TBF2 198 aa6.05□□□□□ -1.44
HMGA1P4-201ENST00000428643 DLX4Q92988 240 aaPredicted RBP6.05□□□□□ -1.44
HMGA1P4-201ENST00000428643 ZNF414Q96IQ9 312 aa6.05□□□□□ -1.44
HMGA1P4-201ENST00000428643 MDFIQ99750 246 aa6.05□□□□□ -1.44
HMGA1P4-201ENST00000428643 SCRT1Q9BWW7 348 aa6.05□□□□□ -1.44
HMGA1P4-201ENST00000428643 SLC25A22Q9H936 323 aa6.05□□□□□ -1.44
HMGA1P4-201ENST00000428643 PEMTQ9UBM1 199 aa6.05□□□□□ -1.44
HMGA1P4-201ENST00000428643 IGHV3-66A0A0C4DH42 116 aa6.04□□□□□ -1.44
HMGA1P4-201ENST00000428643 A0A1W2PPV4 95 aa6.04□□□□□ -1.44
HMGA1P4-201ENST00000428643 TMEM213A2RRL7 107 aa6.04□□□□□ -1.44
HMGA1P4-201ENST00000428643 A8MWP6 167 aa6.04□□□□□ -1.44
HMGA1P4-201ENST00000428643 UMAD1C9J7I0 102 aa6.04□□□□□ -1.44
HMGA1P4-201ENST00000428643 LGALS9O00182 355 aa6.04□□□□□ -1.44
HMGA1P4-201ENST00000428643 OVOL1O14753 267 aa6.04□□□□□ -1.44
HMGA1P4-201ENST00000428643 IFNA7P01567 189 aa6.04□□□□□ -1.44
HMGA1P4-201ENST00000428643 NPPCP23582 126 aa6.04□□□□□ -1.44
HMGA1P4-201ENST00000428643 BMI1P35226 326 aa6.04□□□□□ -1.44
HMGA1P4-201ENST00000428643 CDC34P49427 236 aaPredicted RBP6.04□□□□□ -1.44
HMGA1P4-201ENST00000428643 RHOBP62745 196 aa6.04□□□□□ -1.44
HMGA1P4-201ENST00000428643 FAM78BQ5VT40 261 aa6.04□□□□□ -1.44
HMGA1P4-201ENST00000428643 LINC00305Q7Z4B0 112 aa6.04□□□□□ -1.44
HMGA1P4-201ENST00000428643 OR9G4Q8NGQ1 327 aa6.04□□□□□ -1.44
HMGA1P4-201ENST00000428643 SPATA3Q8NHX4 192 aa6.04□□□□□ -1.44
HMGA1P4-201ENST00000428643 DYNLRB2Q8TF09 96 aa6.04□□□□□ -1.44
HMGA1P4-201ENST00000428643 GATAD1Q8WUU5 269 aa6.04□□□□□ -1.44
HMGA1P4-201ENST00000428643 TMEM37Q8WXS4 190 aa6.04□□□□□ -1.44
HMGA1P4-201ENST00000428643 GRAMD2BQ96HH9 432 aa6.04□□□□□ -1.44
HMGA1P4-201ENST00000428643 RNF2Q99496 336 aa6.04□□□□□ -1.44
HMGA1P4-201ENST00000428643 SHANK2-AS3Q9BTD1 123 aa6.04□□□□□ -1.44
HMGA1P4-201ENST00000428643 ELOVL1Q9BW60 279 aa6.04□□□□□ -1.44
HMGA1P4-201ENST00000428643 MRPL32Q9BYC8 188 aaKnown RBP6.04□□□□□ -1.44
HMGA1P4-201ENST00000428643 SLC25A39Q9BZJ4 359 aaPredicted RBP6.04□□□□□ -1.44
HMGA1P4-201ENST00000428643 VSIRQ9H7M9 311 aa6.04□□□□□ -1.44
HMGA1P4-201ENST00000428643 DNAJC4Q9NNZ3 241 aa6.04□□□□□ -1.44
HMGA1P4-201ENST00000428643 FUT9Q9Y231 359 aa6.04□□□□□ -1.44
HMGA1P4-201ENST00000428643 ANK2Q01484 3957 aa6.04□□□□□ -1.44
HMGA1P4-201ENST00000428643 IGHV7-4-1A0A0J9YVY3 117 aa6.03□□□□□ -1.44
HMGA1P4-201ENST00000428643 C2orf70A6NJV1 201 aa6.03□□□□□ -1.44
HMGA1P4-201ENST00000428643 ZNF705EA8MWA4 302 aaPredicted RBP6.03□□□□□ -1.44
HMGA1P4-201ENST00000428643 H3BRN7 92 aa6.03□□□□□ -1.44
HMGA1P4-201ENST00000428643 K7EMT4 169 aa6.03□□□□□ -1.44
HMGA1P4-201ENST00000428643 EIF3GO75821 320 aaKnown RBP eCLIP6.03□□□□□ -1.44
HMGA1P4-201ENST00000428643 APOHP02749 345 aaPredicted RBP6.03□□□□□ -1.44
HMGA1P4-201ENST00000428643 RAB5CP51148 216 aa6.03□□□□□ -1.44
HMGA1P4-201ENST00000428643 KHDC3LQ587J8 217 aa6.03□□□□□ -1.44
HMGA1P4-201ENST00000428643 SPATA31B1PQ5VZV4 182 aa6.03□□□□□ -1.44
HMGA1P4-201ENST00000428643 LEMD1Q68G75 181 aa6.03□□□□□ -1.44
HMGA1P4-201ENST00000428643 TEX261Q6UWH6 196 aa6.03□□□□□ -1.44
HMGA1P4-201ENST00000428643 PATE2Q6UY27 113 aa6.03□□□□□ -1.44
HMGA1P4-201ENST00000428643 DPPA3Q6W0C5 159 aa6.03□□□□□ -1.44
HMGA1P4-201ENST00000428643 MIR17HGQ75NE6 70 aa6.03□□□□□ -1.44
HMGA1P4-201ENST00000428643 IQCF2Q8IXL9 164 aa6.03□□□□□ -1.44
HMGA1P4-201ENST00000428643 RPP25LQ8N5L8 163 aaKnown RBP6.03□□□□□ -1.44
HMGA1P4-201ENST00000428643 LINC00482Q8N8I6 264 aa6.03□□□□□ -1.44
HMGA1P4-201ENST00000428643 ZNF680Q8NEM1 530 aa6.03□□□□□ -1.44
HMGA1P4-201ENST00000428643 MARC2Q969Z3 335 aa6.03□□□□□ -1.44
HMGA1P4-201ENST00000428643 RHPN1-AS1Q9BWJ2 59 aa6.03□□□□□ -1.44
HMGA1P4-201ENST00000428643 ACTR3CQ9C0K3 210 aaPredicted RBP6.03□□□□□ -1.44
HMGA1P4-201ENST00000428643 TMEM231Q9H6L2 316 aa6.03□□□□□ -1.44
HMGA1P4-201ENST00000428643 SEPSECSQ9HD40 501 aaKnown RBP6.03□□□□□ -1.44
HMGA1P4-201ENST00000428643 RPRMQ9NS64 109 aa6.03□□□□□ -1.44
HMGA1P4-201ENST00000428643 MRPL27Q9P0M9 148 aaKnown RBP6.03□□□□□ -1.44
HMGA1P4-201ENST00000428643 NBEAL1Q6ZS30 2694 aa6.02□□□□□ -1.44
HMGA1P4-201ENST00000428643 TRAV5A0A0B4J249 113 aa6.02□□□□□ -1.45
HMGA1P4-201ENST00000428643 A0A1W2PS18 150 aa6.02□□□□□ -1.45
HMGA1P4-201ENST00000428643 MAP1LC3B2A6NCE7 125 aa6.02□□□□□ -1.45
HMGA1P4-201ENST00000428643 ZNF98A6NK75 572 aa6.02□□□□□ -1.45
HMGA1P4-201ENST00000428643 SEC14L6B5MCN3 397 aa6.02□□□□□ -1.45
HMGA1P4-201ENST00000428643 HMGB3O15347 200 aaKnown RBP6.02□□□□□ -1.45
HMGA1P4-201ENST00000428643 OR7C2O60412 319 aa6.02□□□□□ -1.45
HMGA1P4-201ENST00000428643 SAP30O75446 220 aa6.02□□□□□ -1.45
HMGA1P4-201ENST00000428643 FOLR2P14207 255 aa6.02□□□□□ -1.45
HMGA1P4-201ENST00000428643 CD33P20138 364 aa6.02□□□□□ -1.45
HMGA1P4-201ENST00000428643 EDN2P20800 178 aa6.02□□□□□ -1.45
HMGA1P4-201ENST00000428643 CBLN1P23435 193 aa6.02□□□□□ -1.45
HMGA1P4-201ENST00000428643 CRYBB3P26998 211 aa6.02□□□□□ -1.45
HMGA1P4-201ENST00000428643 FHITP49789 147 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms