RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 DKK2Q9UBU2 259 aa11.77□□□□□ -0.53
VARS-216ENST00000428445 SNRPGP15A8MWD9 76 aa11.76□□□□□ -0.53
VARS-216ENST00000428445 IFNA21P01568 189 aa11.76□□□□□ -0.53
VARS-216ENST00000428445 PRM2P04554 102 aa11.76□□□□□ -0.53
VARS-216ENST00000428445 ALDH3B2P48448 385 aa11.76□□□□□ -0.53
VARS-216ENST00000428445 SAMD13Q5VXD3 122 aa11.76□□□□□ -0.53
VARS-216ENST00000428445 Q6ZR54 194 aa11.76□□□□□ -0.53
VARS-216ENST00000428445 SAV1Q9H4B6 383 aaPredicted RBP11.76□□□□□ -0.53
VARS-216ENST00000428445 IGKV1D-37A0A075B6S9 117 aa11.75□□□□□ -0.53
VARS-216ENST00000428445 TEX48A0A1B0GUV7 120 aa11.75□□□□□ -0.53
VARS-216ENST00000428445 DUXBA0A1W2PPF3 345 aa11.75□□□□□ -0.53
VARS-216ENST00000428445 CFDP00746 253 aaPredicted RBP11.75□□□□□ -0.53
VARS-216ENST00000428445 OR2F1Q13607 317 aa11.75□□□□□ -0.53
VARS-216ENST00000428445 C1orf158Q8N1D5 194 aa11.75□□□□□ -0.53
VARS-216ENST00000428445 RAB2BQ8WUD1 216 aa11.75□□□□□ -0.53
VARS-216ENST00000428445 FAM210BQ96KR6 192 aa11.75□□□□□ -0.53
VARS-216ENST00000428445 NIPSNAP3BQ9BS92 247 aa11.75□□□□□ -0.53
VARS-216ENST00000428445 RBKSQ9H477 322 aa11.75□□□□□ -0.53
VARS-216ENST00000428445 RFNGQ9Y644 331 aa11.75□□□□□ -0.53
VARS-216ENST00000428445 ZFP92A6NM28 416 aa11.74□□□□□ -0.53
VARS-216ENST00000428445 SOCS3O14543 225 aa11.74□□□□□ -0.53
VARS-216ENST00000428445 AKR1C4P17516 323 aa11.74□□□□□ -0.53
VARS-216ENST00000428445 TMBIM6P55061 237 aa11.74□□□□□ -0.53
VARS-216ENST00000428445 GAMTQ14353 236 aa11.74□□□□□ -0.53
VARS-216ENST00000428445 SPCS2Q15005 226 aa11.74□□□□□ -0.53
VARS-216ENST00000428445 FOXI2Q6ZQN5 318 aa11.74□□□□□ -0.53
VARS-216ENST00000428445 LYZL2Q7Z4W2 148 aa11.74□□□□□ -0.53
VARS-216ENST00000428445 C20orf173Q96LM9 149 aa11.74□□□□□ -0.53
VARS-216ENST00000428445 CCDC59Q9P031 241 aaKnown RBP11.74□□□□□ -0.53
VARS-216ENST00000428445 SLC25A6P12236 298 aa11.73□□□□□ -0.53
VARS-216ENST00000428445 PSMB3P49720 205 aa11.73□□□□□ -0.53
VARS-216ENST00000428445 LYZP61626 148 aa11.73□□□□□ -0.53
VARS-216ENST00000428445 RAB11AP62491 216 aa11.73□□□□□ -0.53
VARS-216ENST00000428445 SUPT4H1P63272 117 aaKnown RBP11.73□□□□□ -0.53
VARS-216ENST00000428445 FAM78BQ5VT40 261 aa11.73□□□□□ -0.53
VARS-216ENST00000428445 DYNC2LI1Q8TCX1 351 aa11.73□□□□□ -0.53
VARS-216ENST00000428445 SLC35E1Q96K37 410 aa11.73□□□□□ -0.53
VARS-216ENST00000428445 SOSTQ9BQB4 213 aa11.73□□□□□ -0.53
VARS-216ENST00000428445 YTHDF2Q9Y5A9 579 aaKnown RBP11.73□□□□□ -0.53
VARS-216ENST00000428445 S100A7P31151 101 aa11.72□□□□□ -0.53
VARS-216ENST00000428445 FAUP35544 74 aaKnown RBP11.72□□□□□ -0.53
VARS-216ENST00000428445 RPP30P78346 268 aaKnown RBP11.72□□□□□ -0.53
VARS-216ENST00000428445 ZNF79Q15937 498 aa11.72□□□□□ -0.53
VARS-216ENST00000428445 TMEM88Q6PEY1 159 aa11.72□□□□□ -0.53
VARS-216ENST00000428445 COQ8AQ8NI60 647 aa11.72□□□□□ -0.53
VARS-216ENST00000428445 DEDD2Q8WXF8 326 aa11.72□□□□□ -0.53
VARS-216ENST00000428445 TRGV9Q99603 122 aa11.72□□□□□ -0.53
VARS-216ENST00000428445 C7orf50Q9BRJ6 194 aaKnown RBP11.72□□□□□ -0.53
VARS-216ENST00000428445 LOC102723971A0A1B0GUV8 181 aa11.71□□□□□ -0.53
VARS-216ENST00000428445 FABP12A6NFH5 140 aa11.71□□□□□ -0.53
VARS-216ENST00000428445 ISLRO14498 428 aa11.71□□□□□ -0.53
VARS-216ENST00000428445 PITX3O75364 302 aa11.71□□□□□ -0.53
VARS-216ENST00000428445 MED6O75586 246 aa11.71□□□□□ -0.53
VARS-216ENST00000428445 MEOX2P50222 304 aa11.71□□□□□ -0.53
VARS-216ENST00000428445 PSG9Q00887 426 aa11.71□□□□□ -0.53
VARS-216ENST00000428445 OXA1LQ15070 435 aa11.71□□□□□ -0.53
VARS-216ENST00000428445 TMEM128Q5BJH2 165 aa11.71□□□□□ -0.53
VARS-216ENST00000428445 GGNBP1Q5YKI7 109 aa11.71□□□□□ -0.53
VARS-216ENST00000428445 LRTM2Q8N967 370 aa11.71□□□□□ -0.53
VARS-216ENST00000428445 OR1S1Q8NH92 325 aa11.71□□□□□ -0.53
VARS-216ENST00000428445 C17orf77Q96MU5 243 aa11.71□□□□□ -0.53
VARS-216ENST00000428445 MCUBQ9NWR8 336 aa11.71□□□□□ -0.53
VARS-216ENST00000428445 SLC45A2Q9UMX9 530 aa11.71□□□□□ -0.53
VARS-216ENST00000428445 LRP1BQ9NZR2 4599 aa11.7□□□□□ -0.54
VARS-216ENST00000428445 PAX9P55771 341 aa11.7□□□□□ -0.54
VARS-216ENST00000428445 AP3S2P59780 193 aa11.7□□□□□ -0.54
VARS-216ENST00000428445 IGFL4Q6B9Z1 124 aa11.7□□□□□ -0.54
VARS-216ENST00000428445 EBLN2Q6P2I7 272 aa11.7□□□□□ -0.54
VARS-216ENST00000428445 PPP1R14BQ96C90 147 aa11.7□□□□□ -0.54
VARS-216ENST00000428445 CIB3Q96Q77 187 aaPredicted RBP11.7□□□□□ -0.54
VARS-216ENST00000428445 GOLT1BQ9Y3E0 138 aa11.7□□□□□ -0.54
VARS-216ENST00000428445 A0A0J9YX75 114 aa11.69□□□□□ -0.54
VARS-216ENST00000428445 HBE1P02100 147 aa11.69□□□□□ -0.54
VARS-216ENST00000428445 PRB4P10163 310 aaPredicted RBP11.69□□□□□ -0.54
VARS-216ENST00000428445 IAPPP10997 89 aa11.69□□□□□ -0.54
VARS-216ENST00000428445 TNFSF8P32971 234 aa11.69□□□□□ -0.54
VARS-216ENST00000428445 C1orf134Q5TEV5 83 aa11.69□□□□□ -0.54
VARS-216ENST00000428445 OR8I2Q8N0Y5 310 aa11.69□□□□□ -0.54
VARS-216ENST00000428445 THAP8Q8NA92 274 aa11.69□□□□□ -0.54
VARS-216ENST00000428445 RPRMQ9NS64 109 aa11.69□□□□□ -0.54
VARS-216ENST00000428445 TMED3Q9Y3Q3 217 aa11.69□□□□□ -0.54
VARS-216ENST00000428445 IGKV1OR2-108A0A075B7D4 117 aa11.68□□□□□ -0.54
VARS-216ENST00000428445 ZNF705GA8MUZ8 300 aaPredicted RBP11.68□□□□□ -0.54
VARS-216ENST00000428445 DAD1P61803 113 aa11.68□□□□□ -0.54
VARS-216ENST00000428445 FCN2Q15485 313 aa11.68□□□□□ -0.54
VARS-216ENST00000428445 RRN3P1Q2M238 152 aa11.68□□□□□ -0.54
VARS-216ENST00000428445 TMEM182Q6ZP80 229 aaPredicted RBP11.68□□□□□ -0.54
VARS-216ENST00000428445 OR4D5Q8NGN0 318 aa11.68□□□□□ -0.54
VARS-216ENST00000428445 C16orf92Q96LL3 132 aa11.68□□□□□ -0.54
VARS-216ENST00000428445 GPR82Q96P67 336 aa11.68□□□□□ -0.54
VARS-216ENST00000428445 SLC25A21Q9BQT8 299 aaPredicted RBP11.68□□□□□ -0.54
VARS-216ENST00000428445 SLIRPQ9GZT3 109 aaKnown RBP11.68□□□□□ -0.54
VARS-216ENST00000428445 MAGT1Q9H0U3 335 aa11.68□□□□□ -0.54
VARS-216ENST00000428445 PAIP2BQ9ULR5 123 aaKnown RBP11.68□□□□□ -0.54
VARS-216ENST00000428445 GATA2P23769 480 aaPredicted RBP11.67□□□□□ -0.54
VARS-216ENST00000428445 GALR1P47211 349 aa11.67□□□□□ -0.54
VARS-216ENST00000428445 TNP2Q05952 138 aa11.67□□□□□ -0.54
VARS-216ENST00000428445 RNF212Q495C1 297 aa11.67□□□□□ -0.54
VARS-216ENST00000428445 AMTNQ6UX39 209 aa11.67□□□□□ -0.54
VARS-216ENST00000428445 RSG1Q9BU20 258 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 134.1 ms