RNA–Protein interactions for RNA: ENST00000428404.5

TRIM39-207, Transcript of tripartite motif containing 39, humanhuman

TSL 2

Gene TRIM39, Length 427 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-207ENST00000428404 SAT2Q96F10 170 aaPredicted RBP9.56□□□□□ -0.88
TRIM39-207ENST00000428404 SEPSECSQ9HD40 501 aaKnown RBP9.56□□□□□ -0.88
TRIM39-207ENST00000428404 DOK5Q9P104 306 aa9.56□□□□□ -0.88
TRIM39-207ENST00000428404 HIGD1AQ9Y241 93 aa9.56□□□□□ -0.88
TRIM39-207ENST00000428404 U3KQE9 123 aa9.56□□□□□ -0.88
TRIM39-207ENST00000428404 STAB1Q9NY15 2570 aa9.55□□□□□ -0.88
TRIM39-207ENST00000428404 A0A1W2PRX2 142 aa9.55□□□□□ -0.88
TRIM39-207ENST00000428404 K7EMT4 169 aa9.55□□□□□ -0.88
TRIM39-207ENST00000428404 CCL24O00175 119 aa9.55□□□□□ -0.88
TRIM39-207ENST00000428404 CRYBB3P26998 211 aa9.55□□□□□ -0.88
TRIM39-207ENST00000428404 RHOBP62745 196 aa9.55□□□□□ -0.88
TRIM39-207ENST00000428404 FAM78BQ5VT40 261 aa9.55□□□□□ -0.88
TRIM39-207ENST00000428404 MORN5Q5VZ52 161 aa9.55□□□□□ -0.88
TRIM39-207ENST00000428404 C10orf113Q5VZT2 155 aa9.55□□□□□ -0.88
TRIM39-207ENST00000428404 SPATA31B1PQ5VZV4 182 aa9.55□□□□□ -0.88
TRIM39-207ENST00000428404 SSX7Q7RTT5 188 aa9.55□□□□□ -0.88
TRIM39-207ENST00000428404 REC114Q7Z4M0 266 aa9.55□□□□□ -0.88
TRIM39-207ENST00000428404 FAM213BQ8TBF2 198 aa9.55□□□□□ -0.88
TRIM39-207ENST00000428404 LRRC20Q8TCA0 184 aa9.55□□□□□ -0.88
TRIM39-207ENST00000428404 DPF1Q92782 380 aa9.55□□□□□ -0.88
TRIM39-207ENST00000428404 RNF2Q99496 336 aa9.55□□□□□ -0.88
TRIM39-207ENST00000428404 SHANK2-AS3Q9BTD1 123 aa9.55□□□□□ -0.88
TRIM39-207ENST00000428404 ZNF747Q9BV97 191 aa9.55□□□□□ -0.88
TRIM39-207ENST00000428404 PBDC1Q9BVG4 233 aa9.55□□□□□ -0.88
TRIM39-207ENST00000428404 MRPL32Q9BYC8 188 aaKnown RBP9.55□□□□□ -0.88
TRIM39-207ENST00000428404 ACTR3CQ9C0K3 210 aaPredicted RBP9.55□□□□□ -0.88
TRIM39-207ENST00000428404 FUT9Q9Y231 359 aa9.55□□□□□ -0.88
TRIM39-207ENST00000428404 IGHV3OR16-8A0A075B7F1 116 aa9.54□□□□□ -0.88
TRIM39-207ENST00000428404 TRAV1-1A0A0B4J248 108 aa9.54□□□□□ -0.88
TRIM39-207ENST00000428404 CTXND1A0A1B0GTU2 59 aa9.54□□□□□ -0.88
TRIM39-207ENST00000428404 ZNF705EA8MWA4 302 aaPredicted RBP9.54□□□□□ -0.88
TRIM39-207ENST00000428404 A8MWP6 167 aa9.54□□□□□ -0.88
TRIM39-207ENST00000428404 H3BRN7 92 aa9.54□□□□□ -0.88
TRIM39-207ENST00000428404 NMBP08949 121 aa9.54□□□□□ -0.88
TRIM39-207ENST00000428404 FAM122CQ6P4D5 195 aa9.54□□□□□ -0.88
TRIM39-207ENST00000428404 MIR17HGQ75NE6 70 aa9.54□□□□□ -0.88
TRIM39-207ENST00000428404 LINC00305Q7Z4B0 112 aa9.54□□□□□ -0.88
TRIM39-207ENST00000428404 C1QL4Q86Z23 238 aa9.54□□□□□ -0.88
TRIM39-207ENST00000428404 LYPD6BQ8NI32 183 aa9.54□□□□□ -0.88
TRIM39-207ENST00000428404 RAB24Q969Q5 203 aa9.54□□□□□ -0.88
TRIM39-207ENST00000428404 FAM167A-AS1Q96KT0 104 aa9.54□□□□□ -0.88
TRIM39-207ENST00000428404 DUX3Q96PT4 197 aa9.54□□□□□ -0.88
TRIM39-207ENST00000428404 UHRF2Q96PU4 802 aa9.54□□□□□ -0.88
TRIM39-207ENST00000428404 SLC25A39Q9BZJ4 359 aaPredicted RBP9.54□□□□□ -0.88
TRIM39-207ENST00000428404 RABAC1Q9UI14 185 aa9.54□□□□□ -0.88
TRIM39-207ENST00000428404 VWFP04275 2813 aa9.53□□□□□ -0.88
TRIM39-207ENST00000428404 A0A1W2PPV4 95 aa9.53□□□□□ -0.88
TRIM39-207ENST00000428404 ZNF320A2RRD8 509 aa9.53□□□□□ -0.88
TRIM39-207ENST00000428404 ZNF98A6NK75 572 aa9.53□□□□□ -0.88
TRIM39-207ENST00000428404 H2AFB1P0C5Y9 115 aa9.53□□□□□ -0.88
TRIM39-207ENST00000428404 NPPCP23582 126 aa9.53□□□□□ -0.88
TRIM39-207ENST00000428404 MYCNOSP40205 109 aa9.53□□□□□ -0.88
TRIM39-207ENST00000428404 CDC34P49427 236 aaPredicted RBP9.53□□□□□ -0.88
TRIM39-207ENST00000428404 SLURP1P55000 103 aa9.53□□□□□ -0.88
TRIM39-207ENST00000428404 SYNJ2BPP57105 145 aa9.53□□□□□ -0.88
TRIM39-207ENST00000428404 BLOC1S1P78537 153 aa9.53□□□□□ -0.88
TRIM39-207ENST00000428404 NSUN5P1Q3KNT7 163 aa9.53□□□□□ -0.88
TRIM39-207ENST00000428404 TM4SF20Q53R12 229 aa9.53□□□□□ -0.88
TRIM39-207ENST00000428404 S100A7AQ86SG5 101 aa9.53□□□□□ -0.88
TRIM39-207ENST00000428404 METTL26Q96S19 204 aa9.53□□□□□ -0.88
TRIM39-207ENST00000428404 C20orf24Q9BUV8 137 aa9.53□□□□□ -0.88
TRIM39-207ENST00000428404 SLC25A22Q9H936 323 aa9.53□□□□□ -0.88
TRIM39-207ENST00000428404 DAZ1Q9NQZ3 744 aaKnown RBP9.53□□□□□ -0.88
TRIM39-207ENST00000428404 TECRQ9NZ01 308 aaKnown RBP9.53□□□□□ -0.88
TRIM39-207ENST00000428404 UFC1Q9Y3C8 167 aa9.53□□□□□ -0.88
TRIM39-207ENST00000428404 WNK1Q9H4A3 2382 aa9.53□□□□□ -0.88
TRIM39-207ENST00000428404 TRAV5A0A0B4J249 113 aa9.52□□□□□ -0.89
TRIM39-207ENST00000428404 TMEM213A2RRL7 107 aa9.52□□□□□ -0.89
TRIM39-207ENST00000428404 ZNF207O43670 478 aaKnown RBP9.52□□□□□ -0.89
TRIM39-207ENST00000428404 BUB3O43684 328 aa9.52□□□□□ -0.89
TRIM39-207ENST00000428404 EIF3GO75821 320 aaKnown RBP eCLIP9.52□□□□□ -0.89
TRIM39-207ENST00000428404 APOHP02749 345 aaPredicted RBP9.52□□□□□ -0.89
TRIM39-207ENST00000428404 STAG3L2P0CL84 134 aa9.52□□□□□ -0.89
TRIM39-207ENST00000428404 STAG3L3P0CL85 134 aa9.52□□□□□ -0.89
TRIM39-207ENST00000428404 C8orf88P0DMB2 117 aa9.52□□□□□ -0.89
TRIM39-207ENST00000428404 CLLU1Q5K131 121 aa9.52□□□□□ -0.89
TRIM39-207ENST00000428404 SFT2D1Q8WV19 159 aa9.52□□□□□ -0.89
TRIM39-207ENST00000428404 DLX4Q92988 240 aaPredicted RBP9.52□□□□□ -0.89
TRIM39-207ENST00000428404 ZNF503Q96F45 646 aa9.52□□□□□ -0.89
TRIM39-207ENST00000428404 SCRT1Q9BWW7 348 aa9.52□□□□□ -0.89
TRIM39-207ENST00000428404 IGHV7-4-1A0A0J9YVY3 117 aa9.51□□□□□ -0.89
TRIM39-207ENST00000428404 MAP1LC3B2A6NCE7 125 aa9.51□□□□□ -0.89
TRIM39-207ENST00000428404 S100A7P31151 101 aa9.51□□□□□ -0.89
TRIM39-207ENST00000428404 C1orf194Q5T5A4 169 aa9.51□□□□□ -0.89
TRIM39-207ENST00000428404 IL34Q6ZMJ4 242 aa9.51□□□□□ -0.89
TRIM39-207ENST00000428404 PCNPQ8WW12 178 aaKnown RBP9.51□□□□□ -0.89
TRIM39-207ENST00000428404 SLC25A2Q9BXI2 301 aa9.51□□□□□ -0.89
TRIM39-207ENST00000428404 MAP1LC3BQ9GZQ8 125 aa9.51□□□□□ -0.89
TRIM39-207ENST00000428404 SMPXQ9UHP9 88 aa9.51□□□□□ -0.89
TRIM39-207ENST00000428404 PFDN2Q9UHV9 154 aa9.51□□□□□ -0.89
TRIM39-207ENST00000428404 MRPS12O15235 138 aaKnown RBP9.5□□□□□ -0.89
TRIM39-207ENST00000428404 HMGB3O15347 200 aaKnown RBP9.5□□□□□ -0.89
TRIM39-207ENST00000428404 TAS2R45P59539 299 aa9.5□□□□□ -0.89
TRIM39-207ENST00000428404 RAB14P61106 215 aa9.5□□□□□ -0.89
TRIM39-207ENST00000428404 PMS2P11Q13670 270 aa9.5□□□□□ -0.89
TRIM39-207ENST00000428404 LEMD1Q68G75 181 aa9.5□□□□□ -0.89
TRIM39-207ENST00000428404 C16orf54Q6UWD8 224 aa9.5□□□□□ -0.89
TRIM39-207ENST00000428404 LCN15Q6UWW0 184 aa9.5□□□□□ -0.89
TRIM39-207ENST00000428404 ADAMTSL5Q6ZMM2 481 aa9.5□□□□□ -0.89
TRIM39-207ENST00000428404 PQLC2Q6ZP29 291 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms