RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 PIP4P2Q8N4L2 257 aa8.69□□□□□ -1.02
TCOF1-204ENST00000427724 SPSB4Q96A44 273 aa8.69□□□□□ -1.02
TCOF1-204ENST00000427724 RAB37Q96AX2 223 aa8.69□□□□□ -1.02
TCOF1-204ENST00000427724 IGHV2-70DA0A0C4DH43 119 aa8.69□□□□□ -1.02
TCOF1-204ENST00000427724 TPTE2P1Q5T6R2 138 aa8.69□□□□□ -1.02
TCOF1-204ENST00000427724 PQLC2Q6ZP29 291 aa8.69□□□□□ -1.02
TCOF1-204ENST00000427724 J3QLI3 93 aa8.68□□□□□ -1.02
TCOF1-204ENST00000427724 IGLV1-44P01699 117 aa8.68□□□□□ -1.02
TCOF1-204ENST00000427724 RIPPLY3P57055 190 aa8.68□□□□□ -1.02
TCOF1-204ENST00000427724 NIT1Q86X76 327 aa8.68□□□□□ -1.02
TCOF1-204ENST00000427724 SNAI2O43623 268 aa8.68□□□□□ -1.02
TCOF1-204ENST00000427724 MT-ND6P03923 174 aa8.68□□□□□ -1.02
TCOF1-204ENST00000427724 LINC00205P59089 165 aa8.68□□□□□ -1.02
TCOF1-204ENST00000427724 ZNF497Q6ZNH5 498 aa8.68□□□□□ -1.02
TCOF1-204ENST00000427724 BPIFA4PQ86YQ2 179 aa8.68□□□□□ -1.02
TCOF1-204ENST00000427724 TMEM158Q8WZ71 300 aa8.68□□□□□ -1.02
TCOF1-204ENST00000427724 SGK494Q96LW2 274 aa8.68□□□□□ -1.02
TCOF1-204ENST00000427724 FOXI3A8MTJ6 420 aaPredicted RBP8.68□□□□□ -1.02
TCOF1-204ENST00000427724 INAFM1C9JVW0 142 aa8.68□□□□□ -1.02
TCOF1-204ENST00000427724 H3BTX0 84 aa8.68□□□□□ -1.02
TCOF1-204ENST00000427724 MPDU1O75352 247 aa8.68□□□□□ -1.02
TCOF1-204ENST00000427724 IGLV3-1P01715 115 aa8.68□□□□□ -1.02
TCOF1-204ENST00000427724 ORM1P02763 201 aa8.68□□□□□ -1.02
TCOF1-204ENST00000427724 FAM120AOSQ5T036 256 aa8.68□□□□□ -1.02
TCOF1-204ENST00000427724 FA2HQ7L5A8 372 aa8.68□□□□□ -1.02
TCOF1-204ENST00000427724 OR10J6PQ8NGY7 276 aa8.68□□□□□ -1.02
TCOF1-204ENST00000427724 CEP192Q8TEP8 1941 aa8.68□□□□□ -1.02
TCOF1-204ENST00000427724 YPEL1O60688 119 aa8.68□□□□□ -1.02
TCOF1-204ENST00000427724 CFHR2P36980 270 aa8.68□□□□□ -1.02
TCOF1-204ENST00000427724 COX19Q49B96 90 aa8.68□□□□□ -1.02
TCOF1-204ENST00000427724 RNASEH2CQ8TDP1 164 aaKnown RBP8.68□□□□□ -1.02
TCOF1-204ENST00000427724 MBD3L1Q8WWY6 194 aa8.68□□□□□ -1.02
TCOF1-204ENST00000427724 YPEL2Q96QA6 119 aa8.68□□□□□ -1.02
TCOF1-204ENST00000427724 PTPRSQ13332 1948 aa8.67□□□□□ -1.02
TCOF1-204ENST00000427724 SCO2A0A1W2PP80 73 aa8.67□□□□□ -1.02
TCOF1-204ENST00000427724 HIST1H1EP10412 219 aaKnown RBP8.67□□□□□ -1.02
TCOF1-204ENST00000427724 RELBQ01201 579 aa8.67□□□□□ -1.02
TCOF1-204ENST00000427724 SLC25A34Q6PIV7 304 aa8.67□□□□□ -1.02
TCOF1-204ENST00000427724 CHRDL1Q9BU40 450 aa8.67□□□□□ -1.02
TCOF1-204ENST00000427724 TMEM131Q92545 1883 aa8.67□□□□□ -1.02
TCOF1-204ENST00000427724 TRAV30A0A087WSZ9 112 aa8.67□□□□□ -1.02
TCOF1-204ENST00000427724 OR2T8A6NH00 312 aa8.67□□□□□ -1.02
TCOF1-204ENST00000427724 CRYBB3P26998 211 aa8.67□□□□□ -1.02
TCOF1-204ENST00000427724 UBE2E1P51965 193 aa8.67□□□□□ -1.02
TCOF1-204ENST00000427724 RPL30P62888 115 aaKnown RBP8.67□□□□□ -1.02
TCOF1-204ENST00000427724 DEFB112Q30KQ8 113 aa8.67□□□□□ -1.02
TCOF1-204ENST00000427724 IBA57Q5T440 356 aaKnown RBP8.67□□□□□ -1.02
TCOF1-204ENST00000427724 PRSS3P2Q8NHM4 247 aa8.67□□□□□ -1.02
TCOF1-204ENST00000427724 C10orf105Q8TEF2 133 aa8.67□□□□□ -1.02
TCOF1-204ENST00000427724 IGHV1-3A0A0C4DH29 117 aa8.67□□□□□ -1.02
TCOF1-204ENST00000427724 SAA1P0DJI8 122 aaPredicted RBP8.67□□□□□ -1.02
TCOF1-204ENST00000427724 GATA4P43694 442 aa8.67□□□□□ -1.02
TCOF1-204ENST00000427724 PLP1P60201 277 aa8.67□□□□□ -1.02
TCOF1-204ENST00000427724 MRAPQ8TCY5 172 aa8.67□□□□□ -1.02
TCOF1-204ENST00000427724 FREM2Q5SZK8 3169 aa8.67□□□□□ -1.02
TCOF1-204ENST00000427724 HLA-DQA1P01909 254 aa8.66□□□□□ -1.02
TCOF1-204ENST00000427724 PFN1P07737 140 aaKnown RBP8.66□□□□□ -1.02
TCOF1-204ENST00000427724 ZNF146Q15072 292 aa8.66□□□□□ -1.02
TCOF1-204ENST00000427724 DUX4L9Q6RFH8 374 aaPredicted RBP8.66□□□□□ -1.02
TCOF1-204ENST00000427724 TNFRSF14Q92956 283 aa8.66□□□□□ -1.02
TCOF1-204ENST00000427724 DERL1Q9BUN8 251 aa8.66□□□□□ -1.02
TCOF1-204ENST00000427724 MAP1LC3CQ9BXW4 147 aa8.66□□□□□ -1.02
TCOF1-204ENST00000427724 HELZ2Q9BYK8 2649 aaKnown RBP8.66□□□□□ -1.02
TCOF1-204ENST00000427724 RRHO14718 337 aa8.66□□□□□ -1.02
TCOF1-204ENST00000427724 KLF17Q5JT82 389 aaPredicted RBP8.66□□□□□ -1.02
TCOF1-204ENST00000427724 ACTL10Q5JWF8 245 aa8.66□□□□□ -1.02
TCOF1-204ENST00000427724 TMEM78Q5T7P6 136 aa8.66□□□□□ -1.02
TCOF1-204ENST00000427724 IGLV3-9A0A075B6K5 115 aa8.66□□□□□ -1.02
TCOF1-204ENST00000427724 TMSB15BA0A087X1C1 80 aa8.66□□□□□ -1.02
TCOF1-204ENST00000427724 TEX50A0A1B0GTY4 177 aa8.66□□□□□ -1.02
TCOF1-204ENST00000427724 MYOD1P15172 320 aa8.66□□□□□ -1.02
TCOF1-204ENST00000427724 GATA2P23769 480 aaPredicted RBP8.66□□□□□ -1.02
TCOF1-204ENST00000427724 PAX9P55771 341 aa8.66□□□□□ -1.02
TCOF1-204ENST00000427724 HIST1H1AQ02539 215 aaPredicted RBP8.66□□□□□ -1.02
TCOF1-204ENST00000427724 C10orf55Q5SWW7 151 aa8.66□□□□□ -1.02
TCOF1-204ENST00000427724 DGAT2L7PQ6IED9 249 aa8.66□□□□□ -1.02
TCOF1-204ENST00000427724 KIR3DL3Q8N743 410 aa8.66□□□□□ -1.02
TCOF1-204ENST00000427724 ARHGAP21Q5T5U3 1957 aa8.66□□□□□ -1.02
TCOF1-204ENST00000427724 OR9G9P0C7N8 305 aa8.66□□□□□ -1.02
TCOF1-204ENST00000427724 FOXA3P55318 350 aaPredicted RBP8.66□□□□□ -1.02
TCOF1-204ENST00000427724 LCN12Q6JVE5 192 aa8.66□□□□□ -1.02
TCOF1-204ENST00000427724 NUDT11Q96G61 164 aa8.66□□□□□ -1.02
TCOF1-204ENST00000427724 PAXXQ9BUH6 204 aa8.66□□□□□ -1.02
TCOF1-204ENST00000427724 TNRC6AQ8NDV7 1962 aaKnown RBP8.65□□□□□ -1.02
TCOF1-204ENST00000427724 TRAV1-1A0A0B4J248 108 aa8.65□□□□□ -1.02
TCOF1-204ENST00000427724 OOSP1A8MZH6 123 aa8.65□□□□□ -1.02
TCOF1-204ENST00000427724 DLX6P56179 175 aa8.65□□□□□ -1.02
TCOF1-204ENST00000427724 ZNF585BQ52M93 769 aa8.65□□□□□ -1.02
TCOF1-204ENST00000427724 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.65□□□□□ -1.02
TCOF1-204ENST00000427724 LYPD6BQ8NI32 183 aa8.65□□□□□ -1.02
TCOF1-204ENST00000427724 SMIM12Q96EX1 92 aa8.65□□□□□ -1.02
TCOF1-204ENST00000427724 IGHV4-59P01825 116 aa8.65□□□□□ -1.02
TCOF1-204ENST00000427724 GCHFRP30047 84 aa8.65□□□□□ -1.02
TCOF1-204ENST00000427724 FOXL1Q12952 345 aa8.65□□□□□ -1.02
TCOF1-204ENST00000427724 FBXL19-AS1Q494R0 122 aa8.65□□□□□ -1.02
TCOF1-204ENST00000427724 Q6ZVH6 145 aa8.65□□□□□ -1.02
TCOF1-204ENST00000427724 ZNF430Q9H8G1 570 aaPredicted RBP8.65□□□□□ -1.02
TCOF1-204ENST00000427724 IL36BQ9NZH7 164 aa8.65□□□□□ -1.02
TCOF1-204ENST00000427724 ZNRD1Q9P1U0 126 aa8.65□□□□□ -1.02
TCOF1-204ENST00000427724 UFC1Q9Y3C8 167 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms