RNA–Protein interactions for RNA: ENST00000427239.5

COL11A1-204, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 5

Gene COL11A1, Length 1,709 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-204ENST00000427239 MARC2Q969Z3 335 aa11.75□□□□□ -0.53
COL11A1-204ENST00000427239 GNPNAT1Q96EK6 184 aaPredicted RBP11.75□□□□□ -0.53
COL11A1-204ENST00000427239 PFDN2Q9UHV9 154 aa11.75□□□□□ -0.53
COL11A1-204ENST00000427239 CD33P20138 364 aa11.74□□□□□ -0.53
COL11A1-204ENST00000427239 B2MP61769 119 aa11.74□□□□□ -0.53
COL11A1-204ENST00000427239 TM4SF20Q53R12 229 aa11.74□□□□□ -0.53
COL11A1-204ENST00000427239 STPG3Q8N7X2 389 aa11.74□□□□□ -0.53
COL11A1-204ENST00000427239 METTL26Q96S19 204 aa11.74□□□□□ -0.53
COL11A1-204ENST00000427239 MCRIP2Q9BUT9 160 aaKnown RBP11.74□□□□□ -0.53
COL11A1-204ENST00000427239 PBDC1Q9BVG4 233 aa11.74□□□□□ -0.53
COL11A1-204ENST00000427239 SLC39A9Q9NUM3 307 aa11.74□□□□□ -0.53
COL11A1-204ENST00000427239 SIGLEC8Q9NYZ4 499 aa11.74□□□□□ -0.53
COL11A1-204ENST00000427239 MRPL27Q9P0M9 148 aaKnown RBP11.74□□□□□ -0.53
COL11A1-204ENST00000427239 TIMM9Q9Y5J7 89 aa11.74□□□□□ -0.53
COL11A1-204ENST00000427239 PXMP4Q9Y6I8 212 aa11.74□□□□□ -0.53
COL11A1-204ENST00000427239 IGHV3OR16-8A0A075B7F1 116 aa11.74□□□□□ -0.53
COL11A1-204ENST00000427239 ELOA3CA0A087WX78 387 aaPredicted RBP11.74□□□□□ -0.53
COL11A1-204ENST00000427239 HYPMO75409 117 aa11.74□□□□□ -0.53
COL11A1-204ENST00000427239 ORM2P19652 201 aa11.74□□□□□ -0.53
COL11A1-204ENST00000427239 CBLN1P23435 193 aa11.74□□□□□ -0.53
COL11A1-204ENST00000427239 CRYBB3P26998 211 aa11.74□□□□□ -0.53
COL11A1-204ENST00000427239 LYZP61626 148 aa11.74□□□□□ -0.53
COL11A1-204ENST00000427239 USF2Q15853 346 aaPredicted RBP11.74□□□□□ -0.53
COL11A1-204ENST00000427239 MIC13Q5XKP0 118 aa11.74□□□□□ -0.53
COL11A1-204ENST00000427239 HSD17B11Q8NBQ5 300 aa11.74□□□□□ -0.53
COL11A1-204ENST00000427239 RSG1Q9BU20 258 aa11.74□□□□□ -0.53
COL11A1-204ENST00000427239 ZNF471Q9BX82 626 aaPredicted RBP11.74□□□□□ -0.53
COL11A1-204ENST00000427239 RABAC1Q9UI14 185 aa11.74□□□□□ -0.53
COL11A1-204ENST00000427239 TMEM213A2RRL7 107 aa11.73□□□□□ -0.53
COL11A1-204ENST00000427239 C2orf70A6NJV1 201 aa11.73□□□□□ -0.53
COL11A1-204ENST00000427239 C8orf88P0DMB2 117 aa11.73□□□□□ -0.53
COL11A1-204ENST00000427239 SERF2P84101 59 aa11.73□□□□□ -0.53
COL11A1-204ENST00000427239 PRR31Q5SQ13 230 aa11.73□□□□□ -0.53
COL11A1-204ENST00000427239 IL34Q6ZMJ4 242 aa11.73□□□□□ -0.53
COL11A1-204ENST00000427239 NARS2Q96I59 477 aaKnown RBP11.73□□□□□ -0.53
COL11A1-204ENST00000427239 PSMG3Q9BT73 122 aaPredicted RBP11.73□□□□□ -0.53
COL11A1-204ENST00000427239 ARV1Q9H2C2 271 aa11.73□□□□□ -0.53
COL11A1-204ENST00000427239 DNAJC4Q9NNZ3 241 aa11.73□□□□□ -0.53
COL11A1-204ENST00000427239 MED9Q9NWA0 146 aa11.73□□□□□ -0.53
COL11A1-204ENST00000427239 A0A1W2PS18 150 aa11.72□□□□□ -0.53
COL11A1-204ENST00000427239 CSN3P07498 182 aa11.72□□□□□ -0.53
COL11A1-204ENST00000427239 FOLR2P14207 255 aa11.72□□□□□ -0.53
COL11A1-204ENST00000427239 ATP6V0CP27449 155 aa11.72□□□□□ -0.53
COL11A1-204ENST00000427239 BMI1P35226 326 aa11.72□□□□□ -0.53
COL11A1-204ENST00000427239 INSL3P51460 131 aa11.72□□□□□ -0.53
COL11A1-204ENST00000427239 OR1L4Q8NGR5 311 aa11.72□□□□□ -0.53
COL11A1-204ENST00000427239 OR1B1Q8NGR6 318 aa11.72□□□□□ -0.53
COL11A1-204ENST00000427239 PFDN5Q99471 154 aa11.72□□□□□ -0.53
COL11A1-204ENST00000427239 SMPXQ9UHP9 88 aa11.72□□□□□ -0.53
COL11A1-204ENST00000427239 IGHV7-4-1A0A0J9YVY3 117 aa11.72□□□□□ -0.53
COL11A1-204ENST00000427239 ZNF207O43670 478 aaKnown RBP11.72□□□□□ -0.53
COL11A1-204ENST00000427239 BAP18Q8IXM2 172 aa11.72□□□□□ -0.53
COL11A1-204ENST00000427239 GATAD1Q8WUU5 269 aa11.72□□□□□ -0.53
COL11A1-204ENST00000427239 RNF24Q9Y225 148 aa11.72□□□□□ -0.53
COL11A1-204ENST00000427239 COX7A2P2O60397 106 aa11.71□□□□□ -0.54
COL11A1-204ENST00000427239 OR5G3P0C626 314 aa11.71□□□□□ -0.54
COL11A1-204ENST00000427239 TPT1P13693 172 aaKnown RBP11.71□□□□□ -0.54
COL11A1-204ENST00000427239 OR2G3Q8NGZ4 309 aa11.71□□□□□ -0.54
COL11A1-204ENST00000427239 STOML3Q8TAV4 291 aa11.71□□□□□ -0.54
COL11A1-204ENST00000427239 HIGD1AQ9Y241 93 aa11.71□□□□□ -0.54
COL11A1-204ENST00000427239 U3KQE9 123 aa11.71□□□□□ -0.54
COL11A1-204ENST00000427239 SEC14L6B5MCN3 397 aa11.7□□□□□ -0.54
COL11A1-204ENST00000427239 KRBOX1C9JBD0 128 aa11.7□□□□□ -0.54
COL11A1-204ENST00000427239 TSPAN4O14817 238 aa11.7□□□□□ -0.54
COL11A1-204ENST00000427239 MBP02144 154 aa11.7□□□□□ -0.54
COL11A1-204ENST00000427239 C10orf113Q5VZT2 155 aa11.7□□□□□ -0.54
COL11A1-204ENST00000427239 PATE2Q6UY27 113 aa11.7□□□□□ -0.54
COL11A1-204ENST00000427239 TMEM37Q8WXS4 190 aa11.7□□□□□ -0.54
COL11A1-204ENST00000427239 GRAMD2BQ96HH9 432 aa11.7□□□□□ -0.54
COL11A1-204ENST00000427239 RHPN1-AS1Q9BWJ2 59 aa11.7□□□□□ -0.54
COL11A1-204ENST00000427239 TMEM231Q9H6L2 316 aa11.7□□□□□ -0.54
COL11A1-204ENST00000427239 VSIRQ9H7M9 311 aa11.7□□□□□ -0.54
COL11A1-204ENST00000427239 TECRQ9NZ01 308 aaKnown RBP11.7□□□□□ -0.54
COL11A1-204ENST00000427239 DOK5Q9P104 306 aa11.7□□□□□ -0.54
COL11A1-204ENST00000427239 DNHD1Q96M86 4753 aa11.69□□□□□ -0.54
COL11A1-204ENST00000427239 CHEK1O14757 476 aa11.69□□□□□ -0.54
COL11A1-204ENST00000427239 BUB3O43684 328 aa11.69□□□□□ -0.54
COL11A1-204ENST00000427239 SAP30O75446 220 aa11.69□□□□□ -0.54
COL11A1-204ENST00000427239 CD5P06127 495 aa11.69□□□□□ -0.54
COL11A1-204ENST00000427239 SPP1P10451 314 aa11.69□□□□□ -0.54
COL11A1-204ENST00000427239 FFAR4Q5NUL3 377 aa11.69□□□□□ -0.54
COL11A1-204ENST00000427239 C1orf194Q5T5A4 169 aa11.69□□□□□ -0.54
COL11A1-204ENST00000427239 C9orf66Q5T8R8 295 aa11.69□□□□□ -0.54
COL11A1-204ENST00000427239 ADAMTSL5Q6ZMM2 481 aa11.69□□□□□ -0.54
COL11A1-204ENST00000427239 GPR61Q9BZJ8 451 aa11.69□□□□□ -0.54
COL11A1-204ENST00000427239 SLC25A32Q9H2D1 315 aa11.69□□□□□ -0.54
COL11A1-204ENST00000427239 APOHP02749 345 aaPredicted RBP11.69□□□□□ -0.54
COL11A1-204ENST00000427239 SEC11BP0C7V7 166 aa11.69□□□□□ -0.54
COL11A1-204ENST00000427239 CTAG1AP78358 180 aa11.69□□□□□ -0.54
COL11A1-204ENST00000427239 ACOT6Q3I5F7 207 aaPredicted RBP11.69□□□□□ -0.54
COL11A1-204ENST00000427239 EIF5AL1Q6IS14 154 aaKnown RBP11.69□□□□□ -0.54
COL11A1-204ENST00000427239 LINC00305Q7Z4B0 112 aa11.69□□□□□ -0.54
COL11A1-204ENST00000427239 RNF2Q99496 336 aa11.69□□□□□ -0.54
COL11A1-204ENST00000427239 SLC25A39Q9BZJ4 359 aaPredicted RBP11.69□□□□□ -0.54
COL11A1-204ENST00000427239 SH3BGRL3Q9H299 93 aa11.69□□□□□ -0.54
COL11A1-204ENST00000427239 ZNF98A6NK75 572 aa11.68□□□□□ -0.54
COL11A1-204ENST00000427239 SHANK2-AS3Q9BTD1 123 aa11.68□□□□□ -0.54
COL11A1-204ENST00000427239 RFNGQ9Y644 331 aa11.68□□□□□ -0.54
COL11A1-204ENST00000427239 IGHV3-49A0A0A0MS15 119 aa11.67□□□□□ -0.54
COL11A1-204ENST00000427239 DEFB114Q30KQ6 69 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms