RNA–Protein interactions for RNA: ENST00000426538.6

GINS3-203, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-203ENST00000426538 FAM209BQ5JX69 171 aa11.7□□□□□ -0.54
GINS3-203ENST00000426538 ZNF343Q6P1L6 599 aa11.7□□□□□ -0.54
GINS3-203ENST00000426538 OR5AU1Q8NGC0 362 aa11.7□□□□□ -0.54
GINS3-203ENST00000426538 HIVEP1P15822 2718 aa11.7□□□□□ -0.54
GINS3-203ENST00000426538 KRBOX1C9JBD0 128 aa11.69□□□□□ -0.54
GINS3-203ENST00000426538 PPP5D1E7EU14 171 aa11.69□□□□□ -0.54
GINS3-203ENST00000426538 BMPR1BO00238 502 aa11.69□□□□□ -0.54
GINS3-203ENST00000426538 BCL2P10415 239 aa11.69□□□□□ -0.54
GINS3-203ENST00000426538 GCHFRP30047 84 aa11.69□□□□□ -0.54
GINS3-203ENST00000426538 S100A7P31151 101 aa11.69□□□□□ -0.54
GINS3-203ENST00000426538 MORN5Q5VZ52 161 aa11.69□□□□□ -0.54
GINS3-203ENST00000426538 KLHDC1Q8N7A1 406 aa11.69□□□□□ -0.54
GINS3-203ENST00000426538 STXBP6Q8NFX7 210 aa11.69□□□□□ -0.54
GINS3-203ENST00000426538 SCRT1Q9BWW7 348 aa11.69□□□□□ -0.54
GINS3-203ENST00000426538 SLC25A39Q9BZJ4 359 aaPredicted RBP11.69□□□□□ -0.54
GINS3-203ENST00000426538 TMEM167BQ9NRX6 74 aa11.69□□□□□ -0.54
GINS3-203ENST00000426538 CRLF1O75462 422 aa11.69□□□□□ -0.54
GINS3-203ENST00000426538 RPLP1P05386 114 aaKnown RBP11.69□□□□□ -0.54
GINS3-203ENST00000426538 ZNF506Q5JVG8 444 aa11.69□□□□□ -0.54
GINS3-203ENST00000426538 RXFP4Q8TDU9 374 aa11.69□□□□□ -0.54
GINS3-203ENST00000426538 SLC25A2Q9BXI2 301 aa11.69□□□□□ -0.54
GINS3-203ENST00000426538 OR51M1Q9H341 326 aa11.69□□□□□ -0.54
GINS3-203ENST00000426538 RABAC1Q9UI14 185 aa11.69□□□□□ -0.54
GINS3-203ENST00000426538 VAX2Q9UIW0 290 aa11.69□□□□□ -0.54
GINS3-203ENST00000426538 CUBNO60494 3623 aa11.68□□□□□ -0.54
GINS3-203ENST00000426538 LOC102723971A0A1B0GUV8 181 aa11.68□□□□□ -0.54
GINS3-203ENST00000426538 TMEM218A2RU14 115 aa11.68□□□□□ -0.54
GINS3-203ENST00000426538 TCF21O43680 179 aa11.68□□□□□ -0.54
GINS3-203ENST00000426538 USF2Q15853 346 aaPredicted RBP11.68□□□□□ -0.54
GINS3-203ENST00000426538 TOMM20LQ6UXN7 152 aa11.68□□□□□ -0.54
GINS3-203ENST00000426538 FAM167A-AS1Q96KT0 104 aa11.68□□□□□ -0.54
GINS3-203ENST00000426538 PAXXQ9BUH6 204 aa11.68□□□□□ -0.54
GINS3-203ENST00000426538 PEF1Q9UBV8 284 aaKnown RBP11.68□□□□□ -0.54
GINS3-203ENST00000426538 RNF24Q9Y225 148 aa11.68□□□□□ -0.54
GINS3-203ENST00000426538 PAGE4O60829 102 aa11.67□□□□□ -0.54
GINS3-203ENST00000426538 OR10J4P0C629 311 aa11.67□□□□□ -0.54
GINS3-203ENST00000426538 ICAM4Q14773 271 aa11.67□□□□□ -0.54
GINS3-203ENST00000426538 RNF152Q8N8N0 203 aa11.67□□□□□ -0.54
GINS3-203ENST00000426538 OR5B12Q96R08 314 aa11.67□□□□□ -0.54
GINS3-203ENST00000426538 SHANK2-AS3Q9BTD1 123 aa11.67□□□□□ -0.54
GINS3-203ENST00000426538 GGCTO75223 188 aaKnown RBP11.66□□□□□ -0.54
GINS3-203ENST00000426538 TRBV12-3P01733 135 aa11.66□□□□□ -0.54
GINS3-203ENST00000426538 HSPB1P04792 205 aaKnown RBP11.66□□□□□ -0.54
GINS3-203ENST00000426538 UBE2G2P60604 165 aa11.66□□□□□ -0.54
GINS3-203ENST00000426538 MEF2BQ02080 365 aaPredicted RBP11.66□□□□□ -0.54
GINS3-203ENST00000426538 KIAA0141Q14154 515 aaPredicted RBP11.66□□□□□ -0.54
GINS3-203ENST00000426538 CST9LP1Q5W188 147 aa11.66□□□□□ -0.54
GINS3-203ENST00000426538 LEMD1Q68G75 181 aa11.66□□□□□ -0.54
GINS3-203ENST00000426538 ZNF503Q96F45 646 aa11.66□□□□□ -0.54
GINS3-203ENST00000426538 UBE2E2Q96LR5 201 aa11.66□□□□□ -0.54
GINS3-203ENST00000426538 SLC35B3Q9H1N7 401 aa11.66□□□□□ -0.54
GINS3-203ENST00000426538 C16orf95Q9H693 158 aa11.66□□□□□ -0.54
GINS3-203ENST00000426538 IGHV3OR16-8A0A075B7F1 116 aa11.66□□□□□ -0.54
GINS3-203ENST00000426538 ZNF98A6NK75 572 aa11.66□□□□□ -0.54
GINS3-203ENST00000426538 F8W036 122 aa11.66□□□□□ -0.54
GINS3-203ENST00000426538 H3BRN7 92 aa11.66□□□□□ -0.54
GINS3-203ENST00000426538 SFTA3P0C7M3 94 aa11.66□□□□□ -0.54
GINS3-203ENST00000426538 UBE2L3P68036 154 aaKnown RBP11.66□□□□□ -0.54
GINS3-203ENST00000426538 LINC00052Q96N35 136 aa11.66□□□□□ -0.54
GINS3-203ENST00000426538 C9JQL5 133 aa11.65□□□□□ -0.54
GINS3-203ENST00000426538 NDUFA4O00483 81 aa11.65□□□□□ -0.54
GINS3-203ENST00000426538 PYYP10082 97 aa11.65□□□□□ -0.54
GINS3-203ENST00000426538 ZP3P21754 424 aa11.65□□□□□ -0.54
GINS3-203ENST00000426538 BPIFA4PQ86YQ2 179 aa11.65□□□□□ -0.54
GINS3-203ENST00000426538 TXNDC17Q9BRA2 123 aa11.65□□□□□ -0.54
GINS3-203ENST00000426538 C20orf24Q9BUV8 137 aa11.65□□□□□ -0.54
GINS3-203ENST00000426538 ZFAND3Q9H8U3 227 aa11.65□□□□□ -0.54
GINS3-203ENST00000426538 C11orf94C9JXX5 98 aa11.64□□□□□ -0.55
GINS3-203ENST00000426538 CEBPGP53567 150 aa11.64□□□□□ -0.55
GINS3-203ENST00000426538 OR4F5Q8NH21 305 aa11.64□□□□□ -0.55
GINS3-203ENST00000426538 LINC01006Q8NI28 216 aa11.64□□□□□ -0.55
GINS3-203ENST00000426538 MYOZ3Q8TDC0 251 aa11.64□□□□□ -0.55
GINS3-203ENST00000426538 OR4F4Q96R69 305 aa11.64□□□□□ -0.55
GINS3-203ENST00000426538 METTL26Q96S19 204 aa11.64□□□□□ -0.55
GINS3-203ENST00000426538 SETXQ7Z333 2677 aaKnown RBP11.64□□□□□ -0.55
GINS3-203ENST00000426538 SRP19P09132 144 aaKnown RBP11.63□□□□□ -0.55
GINS3-203ENST00000426538 NPPCP23582 126 aa11.63□□□□□ -0.55
GINS3-203ENST00000426538 FAM106AQ4KMX7 169 aa11.63□□□□□ -0.55
GINS3-203ENST00000426538 SUN5Q8TC36 379 aa11.63□□□□□ -0.55
GINS3-203ENST00000426538 SEC11CQ9BY50 192 aa11.63□□□□□ -0.55
GINS3-203ENST00000426538 TMEM14CQ9P0S9 112 aa11.63□□□□□ -0.55
GINS3-203ENST00000426538 ARL2-SNX15V9GYD0 113 aa11.63□□□□□ -0.55
GINS3-203ENST00000426538 ZNF320A2RRD8 509 aa11.63□□□□□ -0.55
GINS3-203ENST00000426538 FAM74A7A6NL05 159 aa11.63□□□□□ -0.55
GINS3-203ENST00000426538 NDUFA7O95182 113 aa11.63□□□□□ -0.55
GINS3-203ENST00000426538 LGALS1P09382 135 aaKnown RBP11.63□□□□□ -0.55
GINS3-203ENST00000426538 NBEAP1P0C6P0 100 aa11.63□□□□□ -0.55
GINS3-203ENST00000426538 CD81P60033 236 aa11.63□□□□□ -0.55
GINS3-203ENST00000426538 KHDC1LQ5JSQ8 128 aa11.63□□□□□ -0.55
GINS3-203ENST00000426538 SOHLH1Q5JUK2 328 aa11.63□□□□□ -0.55
GINS3-203ENST00000426538 OR4F17Q8NGA8 305 aa11.63□□□□□ -0.55
GINS3-203ENST00000426538 FXYD5Q96DB9 178 aa11.63□□□□□ -0.55
GINS3-203ENST00000426538 ZNF414Q96IQ9 312 aa11.63□□□□□ -0.55
GINS3-203ENST00000426538 PDE6DO43924 150 aa11.62□□□□□ -0.55
GINS3-203ENST00000426538 GP9P14770 177 aa11.62□□□□□ -0.55
GINS3-203ENST00000426538 CDX1P47902 265 aaPredicted RBP11.62□□□□□ -0.55
GINS3-203ENST00000426538 RPEL1Q2QD12 228 aa11.62□□□□□ -0.55
GINS3-203ENST00000426538 OR8I2Q8N0Y5 310 aa11.62□□□□□ -0.55
GINS3-203ENST00000426538 BLNKQ8WV28 456 aa11.62□□□□□ -0.55
GINS3-203ENST00000426538 NKX6-2Q9C056 277 aaPredicted RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms