RNA–Protein interactions for RNA: ENST00000426248.7

PKP4-205, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 4,134 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-205ENST00000426248 FAM162BQ5T6X4 162 aa13.04□□□□□ -0.32
PKP4-205ENST00000426248 PSPNO60542 156 aa13.03□□□□□ -0.32
PKP4-205ENST00000426248 VKORC1L1Q8N0U8 176 aa13.03□□□□□ -0.32
PKP4-205ENST00000426248 GEMIN7Q9H840 131 aaKnown RBP13.03□□□□□ -0.32
PKP4-205ENST00000426248 IZUMO1RA6ND01 250 aa13.03□□□□□ -0.32
PKP4-205ENST00000426248 TMEM8BA6NDV4 472 aa13.03□□□□□ -0.32
PKP4-205ENST00000426248 MIR17HGQ75NE6 70 aa13.03□□□□□ -0.32
PKP4-205ENST00000426248 COMMD5Q9GZQ3 224 aa13.03□□□□□ -0.32
PKP4-205ENST00000426248 METRNQ9UJH8 293 aa13.03□□□□□ -0.32
PKP4-205ENST00000426248 OOEPA6NGQ2 149 aa13.03□□□□□ -0.32
PKP4-205ENST00000426248 PLXNB1O43157 2135 aa13.03□□□□□ -0.32
PKP4-205ENST00000426248 LY6HO94772 140 aa13.03□□□□□ -0.32
PKP4-205ENST00000426248 STAG3L2P0CL84 134 aa13.03□□□□□ -0.32
PKP4-205ENST00000426248 SEC11AP67812 179 aa13.03□□□□□ -0.32
PKP4-205ENST00000426248 KRTAP27-1Q3LI81 207 aa13.03□□□□□ -0.32
PKP4-205ENST00000426248 CHODLQ9H9P2 273 aa13.03□□□□□ -0.32
PKP4-205ENST00000426248 VSTM2AQ8TAG5 236 aa13.03□□□□□ -0.32
PKP4-205ENST00000426248 HIGD1CA8MV81 97 aa13.02□□□□□ -0.32
PKP4-205ENST00000426248 B9A039 149 aa13.02□□□□□ -0.32
PKP4-205ENST00000426248 K7EP34 96 aa13.02□□□□□ -0.32
PKP4-205ENST00000426248 MGST3O14880 152 aa13.02□□□□□ -0.32
PKP4-205ENST00000426248 CNIH1O95406 144 aa13.02□□□□□ -0.32
PKP4-205ENST00000426248 FA2HQ7L5A8 372 aa13.02□□□□□ -0.32
PKP4-205ENST00000426248 PRSS3P2Q8NHM4 247 aa13.02□□□□□ -0.32
PKP4-205ENST00000426248 BLNKQ8WV28 456 aa13.02□□□□□ -0.32
PKP4-205ENST00000426248 ADTRPQ96IZ2 230 aa13.02□□□□□ -0.32
PKP4-205ENST00000426248 SLC25A10Q9UBX3 287 aaPredicted RBP13.02□□□□□ -0.32
PKP4-205ENST00000426248 GAGE12HA6NDE8 117 aa13.02□□□□□ -0.33
PKP4-205ENST00000426248 C17orf98A8MV24 154 aa13.02□□□□□ -0.33
PKP4-205ENST00000426248 ZNF257Q9Y2Q1 563 aa13.02□□□□□ -0.33
PKP4-205ENST00000426248 NAV3Q8IVL0 2385 aa13.02□□□□□ -0.33
PKP4-205ENST00000426248 SAA2-SAA4A0A096LPE2 208 aa13.02□□□□□ -0.33
PKP4-205ENST00000426248 MAP1AP78559 2803 aaPredicted RBP13.01□□□□□ -0.33
PKP4-205ENST00000426248 PGLYRP4Q96LB8 373 aa13.01□□□□□ -0.33
PKP4-205ENST00000426248 LINC00479Q96M42 142 aa13.01□□□□□ -0.33
PKP4-205ENST00000426248 WDR83OSQ9Y284 106 aa13.01□□□□□ -0.33
PKP4-205ENST00000426248 C9orf118A6NHY6 69 aa13.01□□□□□ -0.33
PKP4-205ENST00000426248 E7EQL1 145 aa13.01□□□□□ -0.33
PKP4-205ENST00000426248 PCSK4Q6UW60 755 aa13.01□□□□□ -0.33
PKP4-205ENST00000426248 hADV38S2A0JD32 116 aa13.01□□□□□ -0.33
PKP4-205ENST00000426248 UBE2L3P68036 154 aaKnown RBP13.01□□□□□ -0.33
PKP4-205ENST00000426248 ADAMTSL5Q6ZMM2 481 aa13.01□□□□□ -0.33
PKP4-205ENST00000426248 TCF24Q7RTU0 167 aa13.01□□□□□ -0.33
PKP4-205ENST00000426248 GCSAMQ8N6F7 178 aa13.01□□□□□ -0.33
PKP4-205ENST00000426248 FAM169BQ8N8A8 192 aa13.01□□□□□ -0.33
PKP4-205ENST00000426248 OR10X1Q8NGY0 326 aa13.01□□□□□ -0.33
PKP4-205ENST00000426248 SORL1Q92673 2214 aa13.01□□□□□ -0.33
PKP4-205ENST00000426248 FAM168AQ92567 244 aa13□□□□□ -0.33
PKP4-205ENST00000426248 OSTCQ9NRP0 149 aa13□□□□□ -0.33
PKP4-205ENST00000426248 RPL11P62913 178 aaKnown RBP13□□□□□ -0.33
PKP4-205ENST00000426248 PSG3Q16557 428 aa13□□□□□ -0.33
PKP4-205ENST00000426248 MSMPQ1L6U9 139 aa13□□□□□ -0.33
PKP4-205ENST00000426248 SPATA12Q7Z6I5 190 aa13□□□□□ -0.33
PKP4-205ENST00000426248 RAB1CQ92928 201 aa13□□□□□ -0.33
PKP4-205ENST00000426248 THBDP07204 575 aa13□□□□□ -0.33
PKP4-205ENST00000426248 EFNB3Q15768 340 aa13□□□□□ -0.33
PKP4-205ENST00000426248 TEPPQ6URK8 271 aa13□□□□□ -0.33
PKP4-205ENST00000426248 OR5A1Q8NGJ0 315 aa13□□□□□ -0.33
PKP4-205ENST00000426248 OR13A1Q8NGR1 328 aa13□□□□□ -0.33
PKP4-205ENST00000426248 TMEM167BQ9NRX6 74 aa13□□□□□ -0.33
PKP4-205ENST00000426248 SS18L2Q9UHA2 77 aa13□□□□□ -0.33
PKP4-205ENST00000426248 ASPMQ8IZT6 3477 aa13□□□□□ -0.33
PKP4-205ENST00000426248 IGHV3-72A0A0B4J1Y9 119 aa12.99□□□□□ -0.33
PKP4-205ENST00000426248 LOC389332A0A1B0GUA5 103 aa12.99□□□□□ -0.33
PKP4-205ENST00000426248 C12orf77C9JDV5 145 aa12.99□□□□□ -0.33
PKP4-205ENST00000426248 TMEM177Q53S58 311 aa12.99□□□□□ -0.33
PKP4-205ENST00000426248 SAMD5Q5TGI4 173 aa12.99□□□□□ -0.33
PKP4-205ENST00000426248 OR52E5Q8NH55 327 aa12.99□□□□□ -0.33
PKP4-205ENST00000426248 IGKV3-7A0A075B6H7 116 aa12.99□□□□□ -0.33
PKP4-205ENST00000426248 IGFBP2P18065 325 aa12.99□□□□□ -0.33
PKP4-205ENST00000426248 PRSS57Q6UWY2 283 aa12.99□□□□□ -0.33
PKP4-205ENST00000426248 TREML4Q6UXN2 200 aa12.99□□□□□ -0.33
PKP4-205ENST00000426248 ASCL4Q6XD76 172 aa12.99□□□□□ -0.33
PKP4-205ENST00000426248 C5orf30Q96GV9 206 aa12.99□□□□□ -0.33
PKP4-205ENST00000426248 NPFFR1Q9GZQ6 430 aa12.99□□□□□ -0.33
PKP4-205ENST00000426248 PRORYQ9H606 182 aa12.99□□□□□ -0.33
PKP4-205ENST00000426248 COX7A1P24310 79 aa12.99□□□□□ -0.33
PKP4-205ENST00000426248 FAM53AQ6NSI3 398 aaPredicted RBP12.99□□□□□ -0.33
PKP4-205ENST00000426248 ONECUT1Q9UBC0 465 aa12.99□□□□□ -0.33
PKP4-205ENST00000426248 COL27A1Q8IZC6 1860 aaPredicted RBP12.99□□□□□ -0.33
PKP4-205ENST00000426248 LIPFP07098 398 aa12.98□□□□□ -0.33
PKP4-205ENST00000426248 TAS2R45P59539 299 aa12.98□□□□□ -0.33
PKP4-205ENST00000426248 REG1AP05451 166 aa12.98□□□□□ -0.33
PKP4-205ENST00000426248 SRSF7Q16629 238 aaKnown RBP eCLIP12.98□□□□□ -0.33
PKP4-205ENST00000426248 SPRNQ5BIV9 151 aa12.98□□□□□ -0.33
PKP4-205ENST00000426248 GGTLC1Q9BX51 225 aa12.98□□□□□ -0.33
PKP4-205ENST00000426248 HIF1ANQ9NWT6 349 aa12.98□□□□□ -0.33
PKP4-205ENST00000426248 CFAP47Q6ZTR5 3102 aa12.98□□□□□ -0.33
PKP4-205ENST00000426248 C2orf70A6NJV1 201 aa12.98□□□□□ -0.33
PKP4-205ENST00000426248 C9JCJ5 164 aa12.98□□□□□ -0.33
PKP4-205ENST00000426248 RPL30P62888 115 aaKnown RBP12.98□□□□□ -0.33
PKP4-205ENST00000426248 ADORA2A-AS1P86434 159 aa12.98□□□□□ -0.33
PKP4-205ENST00000426248 TEX45Q8NA69 505 aa12.98□□□□□ -0.33
PKP4-205ENST00000426248 SRSF8Q9BRL6 282 aaKnown RBP12.98□□□□□ -0.33
PKP4-205ENST00000426248 SERTM2A0A1B0GWG4 89 aa12.98□□□□□ -0.33
PKP4-205ENST00000426248 SRRM5B3KS81 715 aa12.98□□□□□ -0.33
PKP4-205ENST00000426248 OPRK1P41145 380 aa12.98□□□□□ -0.33
PKP4-205ENST00000426248 ETDBQ3ZM63 59 aa12.98□□□□□ -0.33
PKP4-205ENST00000426248 FAM90A1Q86YD7 464 aa12.98□□□□□ -0.33
PKP4-205ENST00000426248 NUP35Q8NFH5 326 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms