RNA–Protein interactions for RNA: ENST00000425815.5

SMARCAL1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 310 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-205ENST00000425815 ZNF431Q8TF32 576 aaPredicted RBP13.34□□□□□ -0.27
SMARCAL1-205ENST00000425815 ALMS1Q8TCU4 4167 aa13.33□□□□□ -0.28
SMARCAL1-205ENST00000425815 SCGB1D2O95969 90 aa13.33□□□□□ -0.28
SMARCAL1-205ENST00000425815 CFDP00746 253 aaPredicted RBP13.33□□□□□ -0.28
SMARCAL1-205ENST00000425815 METTL15P1P0C7V9 234 aa13.33□□□□□ -0.28
SMARCAL1-205ENST00000425815 SPP1P10451 314 aa13.33□□□□□ -0.28
SMARCAL1-205ENST00000425815 TAS2R30P59541 319 aa13.33□□□□□ -0.28
SMARCAL1-205ENST00000425815 SNRPD3P62318 126 aaKnown RBP13.33□□□□□ -0.28
SMARCAL1-205ENST00000425815 AKR1C1Q04828 323 aa13.33□□□□□ -0.28
SMARCAL1-205ENST00000425815 MORN3Q6PF18 240 aaPredicted RBP13.33□□□□□ -0.28
SMARCAL1-205ENST00000425815 PFDN2Q9UHV9 154 aa13.33□□□□□ -0.28
SMARCAL1-205ENST00000425815 C7orf66A4D0T2 115 aa13.32□□□□□ -0.28
SMARCAL1-205ENST00000425815 ZNF98A6NK75 572 aa13.32□□□□□ -0.28
SMARCAL1-205ENST00000425815 DEFB4AO15263 64 aa13.32□□□□□ -0.28
SMARCAL1-205ENST00000425815 H2AFB2P0C5Z0 115 aa13.32□□□□□ -0.28
SMARCAL1-205ENST00000425815 ORM2P19652 201 aa13.32□□□□□ -0.28
SMARCAL1-205ENST00000425815 RRAS2P62070 204 aaPredicted RBP13.32□□□□□ -0.28
SMARCAL1-205ENST00000425815 IFITM3Q01628 133 aa13.32□□□□□ -0.28
SMARCAL1-205ENST00000425815 GDF5OSQ5U4N7 250 aa13.32□□□□□ -0.28
SMARCAL1-205ENST00000425815 CEMP1Q6PRD7 247 aaPredicted RBP13.32□□□□□ -0.28
SMARCAL1-205ENST00000425815 CYP2G1PQ6ZSU1 146 aa13.32□□□□□ -0.28
SMARCAL1-205ENST00000425815 BPIFCQ8NFQ6 507 aa13.32□□□□□ -0.28
SMARCAL1-205ENST00000425815 C11orf1Q9H5F2 150 aa13.32□□□□□ -0.28
SMARCAL1-205ENST00000425815 CLEC5AQ9NY25 188 aa13.32□□□□□ -0.28
SMARCAL1-205ENST00000425815 FBXL17Q9UF56 701 aa13.32□□□□□ -0.28
SMARCAL1-205ENST00000425815 SLC45A2Q9UMX9 530 aa13.32□□□□□ -0.28
SMARCAL1-205ENST00000425815 CXorf65A6NEN9 183 aa13.31□□□□□ -0.28
SMARCAL1-205ENST00000425815 TSC22D2O75157 780 aa13.31□□□□□ -0.28
SMARCAL1-205ENST00000425815 DLK1P80370 383 aa13.31□□□□□ -0.28
SMARCAL1-205ENST00000425815 ASAH1Q13510 395 aa13.31□□□□□ -0.28
SMARCAL1-205ENST00000425815 OR8I2Q8N0Y5 310 aa13.31□□□□□ -0.28
SMARCAL1-205ENST00000425815 TMEM217Q8N7C4 229 aa13.31□□□□□ -0.28
SMARCAL1-205ENST00000425815 Q8NAQ8 132 aa13.31□□□□□ -0.28
SMARCAL1-205ENST00000425815 S100ZQ8WXG8 99 aa13.31□□□□□ -0.28
SMARCAL1-205ENST00000425815 PPP1R14BQ96C90 147 aa13.31□□□□□ -0.28
SMARCAL1-205ENST00000425815 SLC25A32Q9H2D1 315 aa13.31□□□□□ -0.28
SMARCAL1-205ENST00000425815 C11orf68Q9H3H3 251 aaKnown RBP13.31□□□□□ -0.28
SMARCAL1-205ENST00000425815 X6R8D5 127 aa13.31□□□□□ -0.28
SMARCAL1-205ENST00000425815 AGRNO00468 2067 aa13.3□□□□□ -0.28
SMARCAL1-205ENST00000425815 FAM240BA0A1B0GVZ2 78 aa13.3□□□□□ -0.28
SMARCAL1-205ENST00000425815 SMCO3A2RU48 225 aa13.3□□□□□ -0.28
SMARCAL1-205ENST00000425815 ZNF705EA8MWA4 302 aaPredicted RBP13.3□□□□□ -0.28
SMARCAL1-205ENST00000425815 RBMY1A1P0DJD3 496 aaKnown RBP13.3□□□□□ -0.28
SMARCAL1-205ENST00000425815 RBMY1CP0DJD4 496 aa13.3□□□□□ -0.28
SMARCAL1-205ENST00000425815 HLA-DRB4P13762 266 aa13.3□□□□□ -0.28
SMARCAL1-205ENST00000425815 IL15RAQ13261 267 aa13.3□□□□□ -0.28
SMARCAL1-205ENST00000425815 RBMY1FQ15415 496 aaKnown RBP13.3□□□□□ -0.28
SMARCAL1-205ENST00000425815 TMEM41BQ5BJD5 291 aa13.3□□□□□ -0.28
SMARCAL1-205ENST00000425815 C12orf45Q8N5I9 185 aaPredicted RBP13.3□□□□□ -0.28
SMARCAL1-205ENST00000425815 OR10P1Q8NGE3 313 aa13.3□□□□□ -0.28
SMARCAL1-205ENST00000425815 OR1B1Q8NGR6 318 aa13.3□□□□□ -0.28
SMARCAL1-205ENST00000425815 C20orf173Q96LM9 149 aa13.3□□□□□ -0.28
SMARCAL1-205ENST00000425815 LINC00052Q96N35 136 aa13.3□□□□□ -0.28
SMARCAL1-205ENST00000425815 NPVFQ9HCQ7 196 aa13.3□□□□□ -0.28
SMARCAL1-205ENST00000425815 HLA-DRB4X5D2U9 266 aa13.3□□□□□ -0.28
SMARCAL1-205ENST00000425815 FNDC10F2Z333 226 aa13.29□□□□□ -0.28
SMARCAL1-205ENST00000425815 K7EPK0 472 aa13.29□□□□□ -0.28
SMARCAL1-205ENST00000425815 IL5P05113 134 aa13.29□□□□□ -0.28
SMARCAL1-205ENST00000425815 PLP1P60201 277 aa13.29□□□□□ -0.28
SMARCAL1-205ENST00000425815 NANOS2P60321 138 aaKnown RBP13.29□□□□□ -0.28
SMARCAL1-205ENST00000425815 RSG1Q9BU20 258 aa13.29□□□□□ -0.28
SMARCAL1-205ENST00000425815 FAM25EA8MYX2 175 aa13.28□□□□□ -0.28
SMARCAL1-205ENST00000425815 PSMB3P49720 205 aa13.28□□□□□ -0.28
SMARCAL1-205ENST00000425815 PATE2Q6UY27 113 aa13.28□□□□□ -0.28
SMARCAL1-205ENST00000425815 PHLDA1Q8WV24 401 aaPredicted RBP13.28□□□□□ -0.28
SMARCAL1-205ENST00000425815 C2orf50Q96LR7 162 aa13.28□□□□□ -0.28
SMARCAL1-205ENST00000425815 TMEM147Q9BVK8 224 aa13.28□□□□□ -0.28
SMARCAL1-205ENST00000425815 SAV1Q9H4B6 383 aaPredicted RBP13.28□□□□□ -0.28
SMARCAL1-205ENST00000425815 SLC25A22Q9H936 323 aa13.28□□□□□ -0.28
SMARCAL1-205ENST00000425815 DOK5Q9P104 306 aa13.28□□□□□ -0.28
SMARCAL1-205ENST00000425815 EPPK1P58107 5090 aaKnown RBP13.27□□□□□ -0.28
SMARCAL1-205ENST00000425815 IGHV4-28A0A0C4DH34 117 aa13.27□□□□□ -0.29
SMARCAL1-205ENST00000425815 C5orf51A6NDU8 294 aa13.27□□□□□ -0.29
SMARCAL1-205ENST00000425815 NUPR2A6NF83 97 aa13.27□□□□□ -0.29
SMARCAL1-205ENST00000425815 H3BRN7 92 aa13.27□□□□□ -0.29
SMARCAL1-205ENST00000425815 DEDDO75618 318 aa13.27□□□□□ -0.29
SMARCAL1-205ENST00000425815 UPK1BO75841 260 aa13.27□□□□□ -0.29
SMARCAL1-205ENST00000425815 JTBO76095 146 aa13.27□□□□□ -0.29
SMARCAL1-205ENST00000425815 ID1P41134 155 aa13.27□□□□□ -0.29
SMARCAL1-205ENST00000425815 MZT2BQ6NZ67 158 aa13.27□□□□□ -0.29
SMARCAL1-205ENST00000425815 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.27□□□□□ -0.29
SMARCAL1-205ENST00000425815 C11orf45Q8TAV5 145 aa13.27□□□□□ -0.29
SMARCAL1-205ENST00000425815 SHANK2-AS3Q9BTD1 123 aa13.27□□□□□ -0.29
SMARCAL1-205ENST00000425815 SCRT1Q9BWW7 348 aa13.27□□□□□ -0.29
SMARCAL1-205ENST00000425815 SLC25A39Q9BZJ4 359 aaPredicted RBP13.27□□□□□ -0.29
SMARCAL1-205ENST00000425815 PTTG2Q9NZH5 202 aa13.27□□□□□ -0.29
SMARCAL1-205ENST00000425815 XCL2Q9UBD3 114 aa13.27□□□□□ -0.29
SMARCAL1-205ENST00000425815 LSM5Q9Y4Y9 91 aaKnown RBP13.27□□□□□ -0.29
SMARCAL1-205ENST00000425815 F6UB75 175 aa13.26□□□□□ -0.29
SMARCAL1-205ENST00000425815 ISLRO14498 428 aa13.26□□□□□ -0.29
SMARCAL1-205ENST00000425815 HYPMO75409 117 aa13.26□□□□□ -0.29
SMARCAL1-205ENST00000425815 GALR1P47211 349 aa13.26□□□□□ -0.29
SMARCAL1-205ENST00000425815 SLC38A11Q08AI6 406 aa13.26□□□□□ -0.29
SMARCAL1-205ENST00000425815 ZNF846Q147U1 533 aa13.26□□□□□ -0.29
SMARCAL1-205ENST00000425815 TEPPQ6URK8 271 aa13.26□□□□□ -0.29
SMARCAL1-205ENST00000425815 FOXI2Q6ZQN5 318 aa13.26□□□□□ -0.29
SMARCAL1-205ENST00000425815 GGACTQ9BVM4 153 aa13.26□□□□□ -0.29
SMARCAL1-205ENST00000425815 ELOA3CA0A087WX78 387 aaPredicted RBP13.25□□□□□ -0.29
SMARCAL1-205ENST00000425815 TRAV8-2A0A0B4J237 113 aa13.25□□□□□ -0.29
SMARCAL1-205ENST00000425815 FAM24AA6NFZ4 105 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms