RNA–Protein interactions for RNA: ENST00000425060.1

IGHV3-47-201, Transcript of immunoglobulin heavy variable 3-47 (pseudogene), humanhuman

BASIC

Gene IGHV3-47, Length 335 nt, Biotype IG V pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-47-201ENST00000425060 C5orf51A6NDU8 294 aa13.11□□□□□ -0.31
IGHV3-47-201ENST00000425060 KNCNA6PVL3 124 aa13.11□□□□□ -0.31
IGHV3-47-201ENST00000425060 GIG44P09565 113 aaPredicted RBP13.11□□□□□ -0.31
IGHV3-47-201ENST00000425060 RRAS2P62070 204 aaPredicted RBP13.11□□□□□ -0.31
IGHV3-47-201ENST00000425060 NRARPQ7Z6K4 114 aa13.11□□□□□ -0.31
IGHV3-47-201ENST00000425060 BPIFCQ8NFQ6 507 aa13.11□□□□□ -0.31
IGHV3-47-201ENST00000425060 OR10P1Q8NGE3 313 aa13.11□□□□□ -0.31
IGHV3-47-201ENST00000425060 ENKURQ8TC29 256 aa13.11□□□□□ -0.31
IGHV3-47-201ENST00000425060 NPVFQ9HCQ7 196 aa13.11□□□□□ -0.31
IGHV3-47-201ENST00000425060 FBXL17Q9UF56 701 aa13.11□□□□□ -0.31
IGHV3-47-201ENST00000425060 SACSQ9NZJ4 4579 aa13.1□□□□□ -0.31
IGHV3-47-201ENST00000425060 SMCO3A2RU48 225 aa13.1□□□□□ -0.31
IGHV3-47-201ENST00000425060 PSMG4Q5JS54 123 aa13.1□□□□□ -0.31
IGHV3-47-201ENST00000425060 CYP2G1PQ6ZSU1 146 aa13.1□□□□□ -0.31
IGHV3-47-201ENST00000425060 STHQ8IWL8 128 aa13.1□□□□□ -0.31
IGHV3-47-201ENST00000425060 IL17DQ8TAD2 202 aa13.1□□□□□ -0.31
IGHV3-47-201ENST00000425060 GATAD1Q8WUU5 269 aa13.1□□□□□ -0.31
IGHV3-47-201ENST00000425060 C17orf77Q96MU5 243 aa13.1□□□□□ -0.31
IGHV3-47-201ENST00000425060 LSM5Q9Y4Y9 91 aaKnown RBP13.1□□□□□ -0.31
IGHV3-47-201ENST00000425060 A0A0J9YWU9 116 aa13.09□□□□□ -0.31
IGHV3-47-201ENST00000425060 ZNF98A6NK75 572 aa13.09□□□□□ -0.31
IGHV3-47-201ENST00000425060 SOCS3O14543 225 aa13.09□□□□□ -0.31
IGHV3-47-201ENST00000425060 DEDDO75618 318 aa13.09□□□□□ -0.31
IGHV3-47-201ENST00000425060 PLP1P60201 277 aa13.09□□□□□ -0.31
IGHV3-47-201ENST00000425060 EWSR1Q01844 656 aaKnown RBP eCLIP13.09□□□□□ -0.31
IGHV3-47-201ENST00000425060 GSG1LQ6UXU4 331 aa13.09□□□□□ -0.31
IGHV3-47-201ENST00000425060 GGACTQ9BVM4 153 aa13.09□□□□□ -0.31
IGHV3-47-201ENST00000425060 CA1P00915 261 aaPredicted RBP13.08□□□□□ -0.32
IGHV3-47-201ENST00000425060 ORM2P19652 201 aa13.08□□□□□ -0.32
IGHV3-47-201ENST00000425060 SNRPD3P62318 126 aaKnown RBP13.08□□□□□ -0.32
IGHV3-47-201ENST00000425060 ACTL10Q5JWF8 245 aa13.08□□□□□ -0.32
IGHV3-47-201ENST00000425060 OR8I2Q8N0Y5 310 aa13.08□□□□□ -0.32
IGHV3-47-201ENST00000425060 MARVELD1Q9BSK0 173 aa13.08□□□□□ -0.32
IGHV3-47-201ENST00000425060 INMT-MINDY4F8WBC2 141 aa13.07□□□□□ -0.32
IGHV3-47-201ENST00000425060 L7N2F9 121 aa13.07□□□□□ -0.32
IGHV3-47-201ENST00000425060 SELENOTP62341 195 aa13.07□□□□□ -0.32
IGHV3-47-201ENST00000425060 VAMP2P63027 116 aa13.07□□□□□ -0.32
IGHV3-47-201ENST00000425060 RAB32Q13637 225 aa13.07□□□□□ -0.32
IGHV3-47-201ENST00000425060 TEPPQ6URK8 271 aa13.07□□□□□ -0.32
IGHV3-47-201ENST00000425060 OR1B1Q8NGR6 318 aa13.07□□□□□ -0.32
IGHV3-47-201ENST00000425060 PPP1R14BQ96C90 147 aa13.07□□□□□ -0.32
IGHV3-47-201ENST00000425060 SLC25A32Q9H2D1 315 aa13.07□□□□□ -0.32
IGHV3-47-201ENST00000425060 GPN1Q9HCN4 374 aaPredicted RBP13.07□□□□□ -0.32
IGHV3-47-201ENST00000425060 MGAT4CQ9UBM8 478 aa13.07□□□□□ -0.32
IGHV3-47-201ENST00000425060 FAM24AA6NFZ4 105 aa13.06□□□□□ -0.32
IGHV3-47-201ENST00000425060 H3BRN7 92 aa13.06□□□□□ -0.32
IGHV3-47-201ENST00000425060 PRAF2O60831 178 aa13.06□□□□□ -0.32
IGHV3-47-201ENST00000425060 SPP1P10451 314 aa13.06□□□□□ -0.32
IGHV3-47-201ENST00000425060 ATF4P18848 351 aaPredicted RBP13.06□□□□□ -0.32
IGHV3-47-201ENST00000425060 MORN3Q6PF18 240 aaPredicted RBP13.06□□□□□ -0.32
IGHV3-47-201ENST00000425060 RARRES2Q99969 163 aa13.06□□□□□ -0.32
IGHV3-47-201ENST00000425060 TMEM147Q9BVK8 224 aa13.06□□□□□ -0.32
IGHV3-47-201ENST00000425060 TENM2Q9NT68 2774 aa13.06□□□□□ -0.32
IGHV3-47-201ENST00000425060 RYR2Q92736 4967 aa13.05□□□□□ -0.32
IGHV3-47-201ENST00000425060 H3BMM0 161 aa13.05□□□□□ -0.32
IGHV3-47-201ENST00000425060 LINC00869P0C866 280 aa13.05□□□□□ -0.32
IGHV3-47-201ENST00000425060 C4BPBP20851 252 aa13.05□□□□□ -0.32
IGHV3-47-201ENST00000425060 PSMB3P49720 205 aa13.05□□□□□ -0.32
IGHV3-47-201ENST00000425060 PATE2Q6UY27 113 aa13.05□□□□□ -0.32
IGHV3-47-201ENST00000425060 SHANK2-AS3Q9BTD1 123 aa13.05□□□□□ -0.32
IGHV3-47-201ENST00000425060 SLC25A39Q9BZJ4 359 aaPredicted RBP13.05□□□□□ -0.32
IGHV3-47-201ENST00000425060 SLC25A22Q9H936 323 aa13.05□□□□□ -0.32
IGHV3-47-201ENST00000425060 LYRM2Q9NU23 88 aaPredicted RBP13.05□□□□□ -0.32
IGHV3-47-201ENST00000425060 PLECQ15149 4684 aaKnown RBP13.04□□□□□ -0.32
IGHV3-47-201ENST00000425060 AGPAT2O15120 278 aa13.04□□□□□ -0.32
IGHV3-47-201ENST00000425060 HYPMO75409 117 aa13.04□□□□□ -0.32
IGHV3-47-201ENST00000425060 PVALBP20472 110 aaPredicted RBP13.04□□□□□ -0.32
IGHV3-47-201ENST00000425060 ID1P41134 155 aa13.04□□□□□ -0.32
IGHV3-47-201ENST00000425060 GALR1P47211 349 aa13.04□□□□□ -0.32
IGHV3-47-201ENST00000425060 BCAP31P51572 246 aa13.04□□□□□ -0.32
IGHV3-47-201ENST00000425060 CAV2P51636 162 aa13.04□□□□□ -0.32
IGHV3-47-201ENST00000425060 SLC38A11Q08AI6 406 aa13.04□□□□□ -0.32
IGHV3-47-201ENST00000425060 TMEM41BQ5BJD5 291 aa13.04□□□□□ -0.32
IGHV3-47-201ENST00000425060 GDF5OSQ5U4N7 250 aa13.04□□□□□ -0.32
IGHV3-47-201ENST00000425060 TMEM252Q8N6L7 170 aa13.04□□□□□ -0.32
IGHV3-47-201ENST00000425060 CSNK1G2-AS1Q8NCQ2 148 aa13.04□□□□□ -0.32
IGHV3-47-201ENST00000425060 OR11H2Q8NH07 326 aa13.04□□□□□ -0.32
IGHV3-47-201ENST00000425060 GPR82Q96P67 336 aa13.04□□□□□ -0.32
IGHV3-47-201ENST00000425060 LYSTQ99698 3801 aa13.04□□□□□ -0.32
IGHV3-47-201ENST00000425060 SCRT1Q9BWW7 348 aa13.04□□□□□ -0.32
IGHV3-47-201ENST00000425060 DOK5Q9P104 306 aa13.04□□□□□ -0.32
IGHV3-47-201ENST00000425060 HIGD1AQ9Y241 93 aa13.04□□□□□ -0.32
IGHV3-47-201ENST00000425060 IGSF23A1L1A6 192 aa13.03□□□□□ -0.32
IGHV3-47-201ENST00000425060 ISLRO14498 428 aa13.03□□□□□ -0.32
IGHV3-47-201ENST00000425060 CST7O76096 145 aa13.03□□□□□ -0.32
IGHV3-47-201ENST00000425060 SIX6O95475 246 aa13.03□□□□□ -0.32
IGHV3-47-201ENST00000425060 HLA-DRB4P13762 266 aa13.03□□□□□ -0.32
IGHV3-47-201ENST00000425060 S100A7P31151 101 aa13.03□□□□□ -0.32
IGHV3-47-201ENST00000425060 DEFA1P59665 94 aa13.03□□□□□ -0.32
IGHV3-47-201ENST00000425060 DEFA3P59666 94 aa13.03□□□□□ -0.32
IGHV3-47-201ENST00000425060 DEFB1P60022 68 aa13.03□□□□□ -0.32
IGHV3-47-201ENST00000425060 S100A10P60903 97 aa13.03□□□□□ -0.32
IGHV3-47-201ENST00000425060 VWC2Q2TAL6 325 aa13.03□□□□□ -0.32
IGHV3-47-201ENST00000425060 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.03□□□□□ -0.32
IGHV3-47-201ENST00000425060 MGST2Q99735 147 aa13.03□□□□□ -0.32
IGHV3-47-201ENST00000425060 RSG1Q9BU20 258 aa13.03□□□□□ -0.32
IGHV3-47-201ENST00000425060 HLA-DRB4X5D2U9 266 aa13.03□□□□□ -0.32
IGHV3-47-201ENST00000425060 GOSR2O14653 212 aa13.02□□□□□ -0.33
IGHV3-47-201ENST00000425060 MEOX2P50222 304 aa13.02□□□□□ -0.33
IGHV3-47-201ENST00000425060 SULT1A1P50225 295 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms