RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 ZNF90Q03938 601 aa11.6□□□□□ -0.55
CHCHD3-202ENST00000423635 OR8I2Q8N0Y5 310 aa11.6□□□□□ -0.55
CHCHD3-202ENST00000423635 OR11H7Q8NGC8 314 aa11.6□□□□□ -0.55
CHCHD3-202ENST00000423635 GLYATL2Q8WU03 294 aa11.6□□□□□ -0.55
CHCHD3-202ENST00000423635 ZNF503Q96F45 646 aa11.6□□□□□ -0.55
CHCHD3-202ENST00000423635 C16orf92Q96LL3 132 aa11.6□□□□□ -0.55
CHCHD3-202ENST00000423635 CACNG5Q9UF02 275 aa11.6□□□□□ -0.55
CHCHD3-202ENST00000423635 U3KQ87 197 aa11.6□□□□□ -0.55
CHCHD3-202ENST00000423635 SNRPGP15A8MWD9 76 aa11.59□□□□□ -0.55
CHCHD3-202ENST00000423635 APOA1P02647 267 aa11.59□□□□□ -0.55
CHCHD3-202ENST00000423635 RNASE10Q5GAN6 216 aaKnown RBP11.59□□□□□ -0.55
CHCHD3-202ENST00000423635 GPR141Q7Z602 305 aa11.59□□□□□ -0.55
CHCHD3-202ENST00000423635 TERB2Q8NHR7 220 aa11.59□□□□□ -0.55
CHCHD3-202ENST00000423635 LHFPL5Q8TAF8 219 aa11.59□□□□□ -0.55
CHCHD3-202ENST00000423635 RBPMSQ93062 196 aaKnown RBP11.59□□□□□ -0.55
CHCHD3-202ENST00000423635 C17orf77Q96MU5 243 aa11.59□□□□□ -0.55
CHCHD3-202ENST00000423635 CACFD1Q9UGQ2 172 aa11.59□□□□□ -0.55
CHCHD3-202ENST00000423635 TEX13DA0A0J9YY54 714 aaPredicted RBP11.58□□□□□ -0.56
CHCHD3-202ENST00000423635 ZFP92A6NM28 416 aa11.58□□□□□ -0.56
CHCHD3-202ENST00000423635 M0R2Z0 102 aa11.58□□□□□ -0.56
CHCHD3-202ENST00000423635 DUSP14O95147 198 aaKnown RBP11.58□□□□□ -0.56
CHCHD3-202ENST00000423635 CNN1P51911 297 aaKnown RBP11.58□□□□□ -0.56
CHCHD3-202ENST00000423635 SPINK13Q1W4C9 94 aa11.58□□□□□ -0.56
CHCHD3-202ENST00000423635 Q5VSD8 79 aa11.58□□□□□ -0.56
CHCHD3-202ENST00000423635 SELENOHQ8IZQ5 122 aaKnown RBP11.58□□□□□ -0.56
CHCHD3-202ENST00000423635 CD3DP04234 171 aa11.57□□□□□ -0.56
CHCHD3-202ENST00000423635 OR5AC1P0C628 307 aa11.57□□□□□ -0.56
CHCHD3-202ENST00000423635 GPX4P36969 197 aaPredicted RBP11.57□□□□□ -0.56
CHCHD3-202ENST00000423635 LYZP61626 148 aa11.57□□□□□ -0.56
CHCHD3-202ENST00000423635 DLK1P80370 383 aa11.57□□□□□ -0.56
CHCHD3-202ENST00000423635 GAMTQ14353 236 aa11.57□□□□□ -0.56
CHCHD3-202ENST00000423635 OR13C8Q8NGS7 320 aa11.57□□□□□ -0.56
CHCHD3-202ENST00000423635 FRZBQ92765 325 aa11.57□□□□□ -0.56
CHCHD3-202ENST00000423635 UHRF2Q96PU4 802 aa11.57□□□□□ -0.56
CHCHD3-202ENST00000423635 COMMD3Q9UBI1 195 aa11.57□□□□□ -0.56
CHCHD3-202ENST00000423635 FABP1P07148 127 aa11.56□□□□□ -0.56
CHCHD3-202ENST00000423635 TBPP20226 339 aa11.56□□□□□ -0.56
CHCHD3-202ENST00000423635 ESRGQ1W209 222 aa11.56□□□□□ -0.56
CHCHD3-202ENST00000423635 Q6ZRN7 208 aaPredicted RBP11.56□□□□□ -0.56
CHCHD3-202ENST00000423635 RXFP4Q8TDU9 374 aa11.56□□□□□ -0.56
CHCHD3-202ENST00000423635 GNPNAT1Q96EK6 184 aaPredicted RBP11.56□□□□□ -0.56
CHCHD3-202ENST00000423635 PTTG2Q9NZH5 202 aa11.56□□□□□ -0.56
CHCHD3-202ENST00000423635 TIMM8BQ9Y5J9 83 aaPredicted RBP11.56□□□□□ -0.56
CHCHD3-202ENST00000423635 GALR1P47211 349 aa11.55□□□□□ -0.56
CHCHD3-202ENST00000423635 ATP5IP56385 69 aaPredicted RBP11.55□□□□□ -0.56
CHCHD3-202ENST00000423635 TAS2R60P59551 318 aa11.55□□□□□ -0.56
CHCHD3-202ENST00000423635 MEF2DQ14814 521 aa11.55□□□□□ -0.56
CHCHD3-202ENST00000423635 NEDD8Q15843 81 aa11.55□□□□□ -0.56
CHCHD3-202ENST00000423635 CDPF1Q6NVV7 123 aa11.55□□□□□ -0.56
CHCHD3-202ENST00000423635 BAP18Q8IXM2 172 aa11.55□□□□□ -0.56
CHCHD3-202ENST00000423635 TMEM256Q8N2U0 113 aa11.55□□□□□ -0.56
CHCHD3-202ENST00000423635 MARCH1Q8TCQ1 289 aa11.55□□□□□ -0.56
CHCHD3-202ENST00000423635 PPP1R14BQ96C90 147 aa11.55□□□□□ -0.56
CHCHD3-202ENST00000423635 LINC01587Q99440 93 aa11.55□□□□□ -0.56
CHCHD3-202ENST00000423635 RTBDNQ9BSG5 229 aaPredicted RBP11.55□□□□□ -0.56
CHCHD3-202ENST00000423635 RSG1Q9BU20 258 aa11.55□□□□□ -0.56
CHCHD3-202ENST00000423635 ZNF586Q9NXT0 402 aa11.55□□□□□ -0.56
CHCHD3-202ENST00000423635 MRPS16Q9Y3D3 137 aaKnown RBP11.55□□□□□ -0.56
CHCHD3-202ENST00000423635 FLG2Q5D862 2391 aaPredicted RBP11.55□□□□□ -0.56
CHCHD3-202ENST00000423635 TMEM268Q5VZI3 342 aa11.54□□□□□ -0.56
CHCHD3-202ENST00000423635 LGI3Q8N145 548 aa11.54□□□□□ -0.56
CHCHD3-202ENST00000423635 OR4D10Q8NGI6 311 aa11.54□□□□□ -0.56
CHCHD3-202ENST00000423635 C16orf74Q96GX8 76 aa11.54□□□□□ -0.56
CHCHD3-202ENST00000423635 TRGV9Q99603 122 aa11.54□□□□□ -0.56
CHCHD3-202ENST00000423635 SRRM2Q9UQ35 2752 aaKnown RBP11.53□□□□□ -0.56
CHCHD3-202ENST00000423635 TRAV12-2A0A075B6T6 113 aa11.53□□□□□ -0.56
CHCHD3-202ENST00000423635 TRAV26-1A0A087WT03 109 aa11.53□□□□□ -0.56
CHCHD3-202ENST00000423635 H3BNG1 76 aa11.53□□□□□ -0.56
CHCHD3-202ENST00000423635 GABARAPH6UMI1 98 aa11.53□□□□□ -0.56
CHCHD3-202ENST00000423635 GABARAPO95166 117 aa11.53□□□□□ -0.56
CHCHD3-202ENST00000423635 M6PRP20645 277 aa11.53□□□□□ -0.56
CHCHD3-202ENST00000423635 LINC00315P59091 139 aa11.53□□□□□ -0.56
CHCHD3-202ENST00000423635 OR5I1Q13606 314 aa11.53□□□□□ -0.56
CHCHD3-202ENST00000423635 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.53□□□□□ -0.56
CHCHD3-202ENST00000423635 OR4D5Q8NGN0 318 aa11.53□□□□□ -0.56
CHCHD3-202ENST00000423635 SLC35E1Q96K37 410 aa11.53□□□□□ -0.56
CHCHD3-202ENST00000423635 SLC25A32Q9H2D1 315 aa11.53□□□□□ -0.56
CHCHD3-202ENST00000423635 NAA60Q9H7X0 242 aa11.53□□□□□ -0.56
CHCHD3-202ENST00000423635 MTFP1Q9UDX5 166 aa11.53□□□□□ -0.56
CHCHD3-202ENST00000423635 SLC45A2Q9UMX9 530 aa11.53□□□□□ -0.56
CHCHD3-202ENST00000423635 TMEM56-RWDD3S4R434 201 aa11.53□□□□□ -0.56
CHCHD3-202ENST00000423635 TRAV8-2A0A0B4J237 113 aa11.52□□□□□ -0.57
CHCHD3-202ENST00000423635 ZNF98A6NK75 572 aa11.52□□□□□ -0.57
CHCHD3-202ENST00000423635 CFDP00746 253 aaPredicted RBP11.52□□□□□ -0.57
CHCHD3-202ENST00000423635 SULT1A3P0DMM9 295 aa11.52□□□□□ -0.57
CHCHD3-202ENST00000423635 SULT1A4P0DMN0 295 aa11.52□□□□□ -0.57
CHCHD3-202ENST00000423635 LSM3P62310 102 aaKnown RBP11.52□□□□□ -0.57
CHCHD3-202ENST00000423635 OR2F1Q13607 317 aa11.52□□□□□ -0.57
CHCHD3-202ENST00000423635 SCGB2B2Q4G0G5 96 aa11.52□□□□□ -0.57
CHCHD3-202ENST00000423635 ZNF493Q6ZR52 646 aa11.52□□□□□ -0.57
CHCHD3-202ENST00000423635 TMEM144Q7Z5S9 345 aa11.52□□□□□ -0.57
CHCHD3-202ENST00000423635 LINC00612Q8N6U2 182 aa11.52□□□□□ -0.57
CHCHD3-202ENST00000423635 OR1B1Q8NGR6 318 aa11.52□□□□□ -0.57
CHCHD3-202ENST00000423635 OR10J6PQ8NGY7 276 aa11.52□□□□□ -0.57
CHCHD3-202ENST00000423635 OR52I2Q8NH67 350 aa11.52□□□□□ -0.57
CHCHD3-202ENST00000423635 DTD1Q8TEA8 209 aa11.52□□□□□ -0.57
CHCHD3-202ENST00000423635 NOP10Q9NPE3 64 aaKnown RBP11.52□□□□□ -0.57
CHCHD3-202ENST00000423635 HSPB7Q9UBY9 170 aa11.52□□□□□ -0.57
CHCHD3-202ENST00000423635 BOLA2-SMG1P6H3BVE0 249 aa11.51□□□□□ -0.57
CHCHD3-202ENST00000423635 ZNF701M0R085 212 aaPredicted RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms