RNA–Protein interactions for RNA: ENST00000421223.5

DDX56-203, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 3,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-203ENST00000421223 FOXL1Q12952 345 aa8.71□□□□□ -1.02
DDX56-203ENST00000421223 C11orf52Q96A22 123 aa8.71□□□□□ -1.02
DDX56-203ENST00000421223 SH2D7A6NKC9 451 aaPredicted RBP8.7□□□□□ -1.02
DDX56-203ENST00000421223 PAX1P15863 534 aa8.7□□□□□ -1.02
DDX56-203ENST00000421223 ZNF25P17030 456 aaPredicted RBP8.7□□□□□ -1.02
DDX56-203ENST00000421223 PKIAP61925 76 aa8.7□□□□□ -1.02
DDX56-203ENST00000421223 C11orf71Q6IPW1 123 aa8.7□□□□□ -1.02
DDX56-203ENST00000421223 FAM168AQ92567 244 aa8.7□□□□□ -1.02
DDX56-203ENST00000421223 RNF2Q99496 336 aa8.7□□□□□ -1.02
DDX56-203ENST00000421223 CRYBG3Q68DQ2 2970 aa8.7□□□□□ -1.02
DDX56-203ENST00000421223 CSPG4Q6UVK1 2322 aa8.7□□□□□ -1.02
DDX56-203ENST00000421223 GZMBP10144 247 aa8.7□□□□□ -1.02
DDX56-203ENST00000421223 CD33P20138 364 aa8.7□□□□□ -1.02
DDX56-203ENST00000421223 PRTN3P24158 256 aa8.7□□□□□ -1.02
DDX56-203ENST00000421223 RPL15P61313 204 aaKnown RBP8.7□□□□□ -1.02
DDX56-203ENST00000421223 FXYD5Q96DB9 178 aa8.7□□□□□ -1.02
DDX56-203ENST00000421223 BPESC1Q9GZL8 116 aa8.7□□□□□ -1.02
DDX56-203ENST00000421223 NAT8BQ9UHF3 227 aa8.7□□□□□ -1.02
DDX56-203ENST00000421223 GOLT1BQ9Y3E0 138 aa8.7□□□□□ -1.02
DDX56-203ENST00000421223 POLQO75417 2590 aa8.7□□□□□ -1.02
DDX56-203ENST00000421223 C9JCJ5 164 aa8.7□□□□□ -1.02
DDX56-203ENST00000421223 PEX7O00628 323 aa8.7□□□□□ -1.02
DDX56-203ENST00000421223 ZNF329Q86UD4 541 aa8.7□□□□□ -1.02
DDX56-203ENST00000421223 THAP8Q8NA92 274 aa8.7□□□□□ -1.02
DDX56-203ENST00000421223 LY6G5BQ8NDX9 201 aa8.7□□□□□ -1.02
DDX56-203ENST00000421223 MRPL18Q9H0U6 180 aaKnown RBP8.7□□□□□ -1.02
DDX56-203ENST00000421223 HIGD1AQ9Y241 93 aa8.7□□□□□ -1.02
DDX56-203ENST00000421223 V9GYV3 84 aa8.7□□□□□ -1.02
DDX56-203ENST00000421223 INS-IGF2F8WCM5 200 aa8.69□□□□□ -1.02
DDX56-203ENST00000421223 LY6LH3BQJ8 138 aa8.69□□□□□ -1.02
DDX56-203ENST00000421223 BTF3L4Q96K17 158 aa8.69□□□□□ -1.02
DDX56-203ENST00000421223 UTP20O75691 2785 aaKnown RBP8.69□□□□□ -1.02
DDX56-203ENST00000421223 TRAV8-1A0A0A6YYK1 113 aa8.69□□□□□ -1.02
DDX56-203ENST00000421223 NUPR1O60356 82 aa8.69□□□□□ -1.02
DDX56-203ENST00000421223 CX3CL1P78423 397 aa8.69□□□□□ -1.02
DDX56-203ENST00000421223 BAGE3Q86Y29 109 aa8.69□□□□□ -1.02
DDX56-203ENST00000421223 EXOC3-AS1Q8N2X6 119 aa8.69□□□□□ -1.02
DDX56-203ENST00000421223 TMEM116Q8NCL8 245 aa8.69□□□□□ -1.02
DDX56-203ENST00000421223 USP9YO00507 2555 aaPredicted RBP8.68□□□□□ -1.02
DDX56-203ENST00000421223 GNG7O60262 68 aa8.68□□□□□ -1.02
DDX56-203ENST00000421223 Q56UQ5 140 aa8.68□□□□□ -1.02
DDX56-203ENST00000421223 C8orf46Q8TAG6 207 aa8.68□□□□□ -1.02
DDX56-203ENST00000421223 TRGV9Q99603 122 aa8.68□□□□□ -1.02
DDX56-203ENST00000421223 USP9XQ93008 2570 aaPredicted RBP8.68□□□□□ -1.02
DDX56-203ENST00000421223 CORTO00230 105 aa8.68□□□□□ -1.02
DDX56-203ENST00000421223 OR2J3O76001 311 aa8.68□□□□□ -1.02
DDX56-203ENST00000421223 IL4P05112 153 aa8.68□□□□□ -1.02
DDX56-203ENST00000421223 IGLC1P0CG04 106 aa8.68□□□□□ -1.02
DDX56-203ENST00000421223 FCGR2BP31994 310 aaPredicted RBP8.68□□□□□ -1.02
DDX56-203ENST00000421223 OR11H6Q8NGC7 330 aa8.68□□□□□ -1.02
DDX56-203ENST00000421223 ITLN2Q8WWU7 325 aaPredicted RBP8.68□□□□□ -1.02
DDX56-203ENST00000421223 CRYGCP07315 174 aa8.67□□□□□ -1.02
DDX56-203ENST00000421223 DDTP30046 118 aa8.67□□□□□ -1.02
DDX56-203ENST00000421223 CAMPP49913 170 aa8.67□□□□□ -1.02
DDX56-203ENST00000421223 C5orf64Q2M2E5 130 aa8.67□□□□□ -1.02
DDX56-203ENST00000421223 FAM120AOSQ5T036 256 aa8.67□□□□□ -1.02
DDX56-203ENST00000421223 REC114Q7Z4M0 266 aa8.67□□□□□ -1.02
DDX56-203ENST00000421223 BCL6BQ8N143 479 aaPredicted RBP8.67□□□□□ -1.02
DDX56-203ENST00000421223 C17orf77Q96MU5 243 aa8.67□□□□□ -1.02
DDX56-203ENST00000421223 TMUB1Q9BVT8 246 aa8.67□□□□□ -1.02
DDX56-203ENST00000421223 EPDR1Q9UM22 224 aa8.67□□□□□ -1.02
DDX56-203ENST00000421223 TMEM238C9JI98 176 aa8.67□□□□□ -1.02
DDX56-203ENST00000421223 SCGB1D1O95968 90 aa8.67□□□□□ -1.02
DDX56-203ENST00000421223 IGLV2-8P01709 118 aa8.67□□□□□ -1.02
DDX56-203ENST00000421223 CRISP2P16562 243 aa8.67□□□□□ -1.02
DDX56-203ENST00000421223 NUTF2P61970 127 aaKnown RBP8.67□□□□□ -1.02
DDX56-203ENST00000421223 ECSCRQ19T08 205 aa8.67□□□□□ -1.02
DDX56-203ENST00000421223 CFHR4Q92496 578 aa8.67□□□□□ -1.02
DDX56-203ENST00000421223 Q9H3A6 140 aa8.67□□□□□ -1.02
DDX56-203ENST00000421223 F2Z2F3 143 aa8.67□□□□□ -1.02
DDX56-203ENST00000421223 TSTD3H0UI37 97 aa8.67□□□□□ -1.02
DDX56-203ENST00000421223 I3L2K1 104 aa8.67□□□□□ -1.02
DDX56-203ENST00000421223 IGKV1-17P01599 117 aa8.67□□□□□ -1.02
DDX56-203ENST00000421223 NDPQ00604 133 aa8.67□□□□□ -1.02
DDX56-203ENST00000421223 CMTM2Q8TAZ6 248 aa8.67□□□□□ -1.02
DDX56-203ENST00000421223 TMEM18Q96B42 140 aa8.67□□□□□ -1.02
DDX56-203ENST00000421223 SLC25A39Q9BZJ4 359 aaPredicted RBP8.67□□□□□ -1.02
DDX56-203ENST00000421223 IGSF10Q6WRI0 2623 aa8.66□□□□□ -1.02
DDX56-203ENST00000421223 CBY3A6NI87 242 aa8.66□□□□□ -1.02
DDX56-203ENST00000421223 K7EIM0 57 aa8.66□□□□□ -1.02
DDX56-203ENST00000421223 M0R1W7 72 aa8.66□□□□□ -1.02
DDX56-203ENST00000421223 GCGP01275 180 aa8.66□□□□□ -1.02
DDX56-203ENST00000421223 ARPC1AQ92747 370 aa8.66□□□□□ -1.02
DDX56-203ENST00000421223 PRORYQ9H606 182 aa8.66□□□□□ -1.02
DDX56-203ENST00000421223 GOLT1AQ6ZVE7 132 aa8.66□□□□□ -1.02
DDX56-203ENST00000421223 DTX2Q86UW9 622 aa8.66□□□□□ -1.02
DDX56-203ENST00000421223 GBGT1Q8N5D6 347 aa8.66□□□□□ -1.02
DDX56-203ENST00000421223 NUDT10Q8NFP7 164 aa8.66□□□□□ -1.02
DDX56-203ENST00000421223 STXBP6Q8NFX7 210 aa8.66□□□□□ -1.02
DDX56-203ENST00000421223 NUDT11Q96G61 164 aa8.66□□□□□ -1.02
DDX56-203ENST00000421223 C2orf88Q9BSF0 95 aa8.66□□□□□ -1.02
DDX56-203ENST00000421223 CDC42EP3Q9UKI2 254 aa8.66□□□□□ -1.02
DDX56-203ENST00000421223 LRRK2Q5S007 2527 aa8.65□□□□□ -1.02
DDX56-203ENST00000421223 OR2T8A6NH00 312 aa8.65□□□□□ -1.02
DDX56-203ENST00000421223 A6NNC1 897 aa8.65□□□□□ -1.02
DDX56-203ENST00000421223 FSTL3O95633 263 aa8.65□□□□□ -1.02
DDX56-203ENST00000421223 NPSP0C0P6 89 aa8.65□□□□□ -1.02
DDX56-203ENST00000421223 HOXB4P17483 251 aaPredicted RBP8.65□□□□□ -1.02
DDX56-203ENST00000421223 EFNA4P52798 201 aa8.65□□□□□ -1.02
DDX56-203ENST00000421223 DMRTA1Q5VZB9 504 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms